Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                --------->ARR14(2)                                                              <---------ARR14(2)               <---------YAB1                    --------->ANAC46              --------->AHL20(2)          <----------DOF2     --------->GLK1(2) -------TEIL  <---------AHL20(2)      <---------ZAT18   <---------ATHB12 ------->CCA1(2)        ----------->GT1 <---------At4g35610  <---------GLK1(2)    <-----------ARR10   gatacatgtctgatattaatataaaacagtgaaaaatcagtgagcttttacacatcccatcaagaatctgagtacaaagtttcaaatctaaccatgaaat  3038100                                                                    --------->ANAC58                                                                    --------->ANAC46                                                                    --------->ANAC58                                                          ------>ZmHOX2a(2)                                                         --------->GLK1(1)            --------->ANAC58                             <------ZmHOX2a(2)            --------->ANAC58                            <---------ARR11(3)     <-------TEIL            --------->ANAC46         --------->At5g28300<-----------ARR10      <---------ZAT18   --------->At4g35610              ----------->GT1     <---------ARR14(2)     --------->ZAT18   <---------At4g35610             <---------DEAR3(1)   --------->ARR14(2) --------->DAG2 --------->ZAT14         --------->YAB1                 --------->ARR11(3) <---------------AtSPL8 <---------ZAT18         --------->ANAC46               <---------AGP1    ---------->DOF2   cagtgagctataacacacaaatgacaaacacaacaagacggtgaaaatgaacagaacagatctcatccacaagaaataaagtacacatcttcacattcag  3038200                                                                        <---------HSFC1(1)                                             ------>ZmHOX2a(1)          --------->HSFB2a(2)  <-------                                             --------------->AGL15      <---------HSFB2a(2)--------->MYB52(1)                                         --------->ARR14(2)       <---------DAG2         --------->DOF5.7(2)              --------->MYB52(1)      --------->DAG2         ---------->DOF2            <-------GAMYB  <---------ZAT14                    ---------->DOF2----------->GT1     --------->HSFC1(1) <---------DOF5.7(2)  --------->ZAT14               --------->AtLEC2  ---------->DOF2 <----------DOF2---------->DOF2   acagagaactgagaactaagagaagcacaaaaccatgaaaaaagttcctcagaaaagaaaaacaaaagctttttctagacccataaagacagttaacgac  3038300                                                                                          --------->At4g35610                                                                                          <---------At4g35610                                                                                          ------>ZmHOX2a(1)                                                                                      --------->ARR14(2)                                                                                      <---------ARR14(2)         <----------DOF2                                                              <-----------HVH21        --------->TOE1(3)                                                          <---------ANAC58  <-------TEIL  --------->MYB52(1)  <---------HSFB2a(2)     ---------->DOF2        <---------ANAC58 --------->CCA1(2)   ---------->DOF2--------->HSFB2a(2)----------->RAV1(1)       <---------At5g28300 ---ID1 --------->TOE2(3)   <-----------GT1 <---------At4g35610                 <-----------GT1   aagattcaaacctttaagaaaccgaaagtttaacctttctagactaagctaattcaacaacataaagagtttagaacatagtttaccgtgtcctctgaag  3038400                                 <---------ANAC58                                 <---------ANAC58                              <----------DOF2                            <---------HSFC1(2)                --------->ARR11(3)                                        <---------ANAC58                <---------ARR11(3)        ------>ZmHOX2a(1)               <---------ANAC58<----------DOF2   --------->ETT(1)         --------->HSFC1(2)   <----------DOF2--------->GLK1(2)<---------CCA1(2) <-----------HVH21 <----------DOF2 ------>ZmHOX2a(1)     ---------->DOF2 --------->MYB52(2)   acatgtcggaacgcttaagaactttgaagaagctttcctgcttcctctcttctttgcaccaaagaaaatcagggttacttgccatctctctcctttgaaa  3038500                                                                                 <-----------GT1                                                                             <---------AHL20(1)                                                                             --------->AHL20(1)                                                                            --------->ICU4                    ------>MYB46(1)            <---------CCA1(2)       --------->ANAC55(2)                    -------->P             <---------ANAC58            --------->YAB1      <---------ANAC58           <---------ARR11(3)              <---------ANAC58            ----------->GT1     <---------ANAC46  <---------YAB1    ------>MYB83  ------>ZmHOX2a(1)                 ------>ZmHOX2a(1)      <---------ANAC58   tgttctgattcaagctctcacctacaagttttgctccttcaacttgctcgtctctctcactctctatctcctctcgtaatatttttctctctgtcttgtt  3038600                                                     ---------->DOF2                                                    --------->YAB1                                                   <---------ATHB12         <----------DOF2                                                 --------->WOX13(1)    ---------->DOF2                                               ------------>CBF   ----------->GT1                  --------->ANAC58         <---------YAB1     ---------->DOF2                  --------->ANAC58       --------->CCA1(2)   <---------WRKY12                    ----                ---------->DOF2         --------->ARR11(3)   <---------WRKY45                    <---   <---------MYB52(1)                   <---------ARR11(3)   <---------WRKY38(1)   ------------>CBF <---------MYB46(3)    <---------ALFIN1 --------->ARR11(1)  --------->WRKY18(1)  ------>ZmHOX2a(1)   gagccgttgaatatgtagcaaagcaccacttaaaatttcaaagatatgattcaatcaaagtggtcaaagtgaaaaaagctttcctctcaatactgaaact  3038700                                                               --------->YAB1                                                             <---------YAB1           ----------->GT1                                                          <---------YAB1              <---------ANAC46                                                        --------->YAB1                <---------ANAC58                    <----------DOF2                    <---------ATHB51               <---------ANAC58       --------->YAB1                                  --------->ICU4           <----------DOF2     <------------CBF                           <---------ANAC58           ------->TEIL   <---------YAB1   ------>ZmHOX2a(1)           <---------ANAC58  --------->MYB52(1) ---------->ID1  ------------>CBF  <---------DAG2    --------->AHL20(2)<--------HAHB4  <XXXXXXXXXXXXXXXXXXXXMIR399F ----->ZAT14--------->bZIP60(1)       <---------AHL20(2)<---------ICU4  <XXXXXXXXXXXXXXXXXXXXMIR399E ------ZAT14<---------bZIP60(1)      --------->AHL20(2)<---------YAB1 --------->At4g35610   <--------   gtagtacaattgtgacttcatcctttttggatgtgttcatttaattcatagcatgcgattattatgcataacagatgaatctcttttggcgttaatacat  3038800                                                    <-----------------AGL1                                 --------->ANAC58   =================================================                                 --------->ANAC58<----------DOF2                     --------->ANAC46         <-----------GT1         <---------ZAT14                <---------------AtSPL8      --------->YAB1       <---------YAB1                --------------->AtSPL3     --------->ICU4        --------->ICU4                <---------------AtSPL3     <---------YAB1   --------->ANAC55(2)     <---------ANAC46--------->ANAC58  --------->At5g28300 --------->MYB59                          <  ----------->HVH21 --------->SPL7    <---------ZAT6<-----------------AG                        <----  --------->WRKY38(1)--------->ANAC58 ----------->GT1      <---------TOE2(3)                    ----- ---GT1----------->GT1          <---------------AtSPL3     <---------TOE1(3)                <--------   ttcggtgactggaaataagaagtacgacactaggcaagtactgtaattatacttttctgtttaggtaatgactgtattggattagttcttcattttgata  3038900                                                 <---------TOE1(3)                                          --------->MYB46(3)                              <---------------AGL15  <---------MYB46(3)                             <-----------------AG--------->DAG2                             <-----------------AGL1  ----------->GT1                          <------ ==============================================MADS_MADS                                      ------- ---------AHL20(2)       --------->YAB1  -------->P --------->ALFIN1                        <------ZmHOX2a(1) -----AHL20(2)          --------->ICU4   --------->ANAC58                            --------->DAG2 ---->AHL20(2)   ---------->DOF2         --------->ANAC58                            <---------TOE2(3) -YAB1     ----------->GT1  <-----------GT1      <---------TOE2(3)                 ---------->DOF2   aatttatgaagaagagtataaaagaaattataacttatttggcaaccacttaaggtggtgaagttgtctccaagaacatataagaaaaaggttaggattt  3039000  Previous    Next  AGI:  At5g09780.1    Description:  transcriptional factor B3 family protein. similar to transcriptional factor B3 family protein [Arabidopsis thaliana] (TAIR:AT2G16210.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82372.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) Range:  from: 3036957    to: 3038485    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g09790.1    Description:  ATXR5 (SETDOMAIN GROUP 15); DNA binding. Identical to Histone-lysine N-methyltransferase ATXR5 (ATXR5) [Arabidopsis Thaliana] (GB:Q8VZJ1;GB:Q9FXW6;GB:Q9LXE2); similar to ATXR6 (Arabidopsis thaliana Trithorax- related protein 6), DNA binding [Arabidopsis thaliana] (TAIR:AT5G24330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46447.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain SET; (InterPro:IPR001214) Range:  from: 3038979    to: 3041045    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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