Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              ------->MYC3                                            <-------MYC3                                           --------->ANAC46                                           --------->ANAC55(1)                                           --------->ANAC58                                           --------->ANAC58                            <---------ICU4 --------->TGA1a                           <---------ATHB12<---------TGA1a                           --------->AHL20(2)                       <---------ATHB12    <---------O2                      --------->ANAC58--------->ZAT14                       --------->YAB1            --------->AHL20(2)        <---------REM1(2)                   --------->GLK1(2)      ----            <---------AHL20(2)      --------->ANAC46              --------->At4g35610            <---   <----------DOF2    --------->ANAC58<---------ZAT14       --------->AHL20(2)               <------ZmHOX2a(1)   ==================================================bZIP_DOF<---------AHL20(2) --------->ARR14(2) -----------GT1      --------->WOX13(1)    --------->O2----------->GT1   <---------GLK1(2) <---------TOE2(3) -----AHL20(2)<---------AHL20(2)  --------->ZAT6 <---------At5g28300   XXXXXXXXXXXXXXXXXXXX>MIR866-5P   tttttctttagcatataaatttgcaatcaataaataccactacacacgtttcacagtgagtataaaatagctcaagaatcggaatttgctattaaggagt  3036200                                                               --------->GLK1(2)            --------->MYB52(1)                                --------->ARR14(2)         --------->ANAC46                                     <---------GLK1(2)<---------AHL20(2)        --------->LBD16      --------->At4g35610              <---------ARR14(2)        <<<<<<<GRF7 <----------DOF2         <---------ARR14(2)                  <---------At4g35610      ----------->HVH21 ------>ZmHOX2a(1)       --------->ARR14(2)        <------ZmHOX2a(1)           --------->AHL20(2) ----->ARR14(2)          --------->GLK1(2)       <---------TOE2(2)       --------->TOE1(3) ------ARR14(2)         <---------GLK1(2)      --------->TOE1(2)         --------->TOE2(3)        ---   atcctttttccacaaaacagacattagaatctgatgaaattgagttagacgtaggaaaatggcagattctataaaccctaattaaaccctgacaatggga  3036300                                                        ------>MYB46(1)                                                        ------>MYB83                                                       --------->MYB52(1)                        <<<<<<<<<<<<<<<<<LFY          --------->MYB46(3)                  --------->TOE2(3)                --------->REM1(1)                  --------->TOE1(3)          ------->MYC2                              <---------ALFIN1           --------->ZAT14                   ------->PIF5                             ------>MYB83       --------------->AtSPL8 --------->ZAT14<-------PIF5                             ------>MYB46(1)       --------------->AtSPL3 <---------ZAT18<-------MYC2                             -------->P       <---------ICU4  <---------ZAT6        ------->MYC3                    <---------WOX13(1)     --------->GLK1(2) ----------->HVH21     <-------MYC3                 ------>ZmHOX2a(1) ------->DOF2   <---------ARR11(3)        <------------OsbHLH66   --------->TOE2(3) --------->AtMYB61   gaaagagaatcagtacaataccttagtgacagtggtctcaatacgctcgtgcttcaccaactgagaaaccatagtcctgagtgataccaacacttcaaaa  3036400                                                                                                 ----                                                                                           --------->ORA47(1)                                                                                           ------>NtERF2                                                                                          --------->RAP2.6(2)                                                                                          <---------ETT(2)                                                                                          --------->DEAR3(1)                                                                                          -----------                                                                                         --------->SPL7                                                                                         --------->DEAR3(2)                                                                                        --------->ATERF1(1)                                                                                        <------NtERF2                                                                                        <---------ATERF1(1)                                                                                       <---------SPL7                                                                                       ------>NtERF2                                                                                       <---------ATERF1(1)                                                                                       --------->ORA47(1)                                                                                      <---------ATERF1(2)                                                                                      <---------DEAR3(1)                                                                                      --------->ATERF1(2)                                                                                     --------->ATERF1(1)                                                                                     <------NtERF2                                                                                     --------->DEAR4(2)                                                                                    <---------ATERF1(1)                                                                                    --------->MYB52(1)                                                                                    --------->LBD16                                                                                    ------>NtERF2----                                                                                   --------->ANAC46                                                                                   --------->DEAR3(1)                              <---------O2   --------->GLK1(2)                  --------->PCF2   <---                              --------->O2  --------->DAG2              <---------SPL7--------->DEAR3(1)                              --------->ANAC55(2)                <---------AtLEC2 --------->MYB46(3)                              <---------REM1(1)             --------->TOE2(3) --------->WRKY38(1)<---                              <---------ANAC55(2)           --------->TOE2(2) ----------->HVH21  ----                     ---------->DOF2       ---------->DOF2  --------->TOE1(3)<-----------HVH21  -----                 ---------->DOF2      ---------->DOF2       --------->TOE1(2)--------->At5g28300-----   atcaaacgatttctatctaaaaagaaagtgagacgtagcaaaaagaaaagctggagactaaacctaagcatggacatacggtgacccgccggccgaccaa  3036500   ------>ZmHOX2a(1)   --------->LBD16                  ------>ZmHOX2a(2) ----->HSFC1(2)                     =====================================HOX2a_HOX2a >HVH21                   <------NtERF2                              <------ZmHOX2a(1) ----->ZAT2             <---------ANAC46--------->ZAT14         --------->ALFIN1 ------HSFC1(2)         <---------DEAR3(1)                    *TSS<------ZmHOX2a(1) ------ZAT2           <-----------HVH21 <---------ZAT14    ---------->DOF2             ---------->DOF2 ----->HSFB2a(1)--------->ARR14(2) <---------GLK1(1)       --------->MYB52(1)         ----------->HVH21 ->MYB83   <-----------HVH21      --------->ARR11(3)    --------->TOE2(3)    --------->At5g28300 ->MYB46(1)<-----------TGA1       <---------ARR11(3)    --------->TOE1(3)   ----------->GT1   gcttcctgaacttcgtcatttctgcgtcggagaagtgatctctgaacagagagaagaaccctaaaggaggaggagagactgtaactctgtgaagcgccta  3036600                                <----------DOF2                        <-----------GT1                                <---------MYB52(1)                        --------->ARR14(2)               <---------CCA1(2)                        --------->ARR11(3)              --------->ARR14(2)                   <-----------TBP                     <---------CCA1(2)              --------->PCF2------>ZmHOX2a(1)     --------->PCF2   --------->MYB52(1)         <----------DOF2<---------ARR14(2)   ---------->DOF2  ------>ZmHOX2a(1)   ctgggtttgggctttgggcccatatatatcctctcttttttttggacaaaagggcccatatatcctacaaaccggtttttgactaattctgttctaaact  3036700                                          <---------At4g35610                                          --------->At4g35610                          --------->ANAC55(1)                                         <---------MYB46(3)                            --------->ANAC58                                        <--------P                                     --------->ANAC55(2)                     --------->DAG2    <---------ANAC58                                --------->ANAC46                    ---------->DOF2    <-------GAMYB                              --------->ARR14(2)             --------->TOE2(3)         <---------ANAC58                        --------->ANAC55(1)        <---------HSFB2a(1)           <---------MYB46(3)                       --------->ANAC58        --------->At4g35610          <---------YAB1                            <---------ANAC55(2)        --------->HSFB2a(1)          <---------TOE2(3)               <---------AHL20(2)<---------ANAC55(2)        <---------At4g35610      --------->ARR11(3)                 --------->AHL20(2) --------->ANAC58       --------->GLK1(2)         <---------GLK1(2)            --------->ANAC58 --------->ANAC58       <---------ARR14(2)        <---------ARR14(2)           --------->ANAC58 --------->ANAC46       --------->ARR14(2)        --------->ARR14(2)         ---------->DOF2   <---------LBD16    ----      <---------GLK1(2)     ----------->RAV1(1)        --------->MYB52(1)   ----------->HVH21   -----   aaaatttggaatctgcctcaaaaaaagttccaacagattttggttgctgaatataactaagagaaagcaaattaatgtctcacggaaacacgaaacaaat  3036800                     --------->ANAC58                       --------->ZAT6                     --------->ANAC58                   <---------MYB52(2)                    <------                   ---------->DOF2                  <---------MYB59                           <------                 <---------YAB1               --------->ANAC55(2)                             <------              --------->TOE2(2)               --------->ANAC46            ---------->DOF2  <---------MYB52(1) ----->YAB1  --------->YAB1           ---------->DOF2 ------>MYB46(1) --------->YAB1      <---------At4g35610 ---->AHL20(2)--------->TOE1(2)      <------ZmHOX2a(1)------>MYB83--------->AHL20(2)      <-------GAMYB   aaaaattggtcccaaacatatgaaagctacagacgagtaggaaagttcacataaccaaactaacaccattaaacataaaagtagtttacttcagttgctt  3036900                                                                                           ----------                                                                                         <---------ANAC58                                                                                         <---------ANAC46                                                                                      --------->ALFIN1     --------->ANAC58                                                                 <---------AtMYB61     --------->ANAC46       <---------YAB1                               ---------->DOF2 <---------ANAC58     --------->ANAC58    --------->At4g35610                <----------DOF2    <---------ZAT2 ---ANAC46          --------->WOX13(1)                     <---------ANAC46    --------->ZAT2 ---ANAC58         <-------TEIL                            <---------ANAC58    --------->At4g35610 -- ---ANAC58  <-----------HVH21    --------->YAB1            <---------ANAC58    <---------At4g35610---   gttatccaaggcaccttcacatccatcagcatcattcatcagtgagttattctctcttatggctttgagacaactagaagcagctcgagtggtgtgatga  3037000                                       --------->AtLEC2                               <---------ARR14(2)   --------->ARR14(2)          --------->ARR14(2)                                                  <-   <---------ARR14(2)          <---------ARR11(3)                       <-----------GT1            <- ->HVH21                       <---------GLK1(2)          ----------->RAV1(1)                      -- ------->At5g28300            <------ZmHOX2a(1)         --------->MYB46(3)           <-----------GT1 -------->GT1            ----------->RAV1(1)            <---------MYB55(2)        <----------DOF2  --   gggtgaatttgcaagtgtccccaaaaacaacaggatactccttgcacaaacgtttccatccaccagagaaaatttgacccctctcttttaccacaaaaac  3037100  Previous    Next  AGI:  At5g09770.1    Description:  ribosomal protein L17 family protein. similar to ribosomal protein L17 family protein [Arabidopsis thaliana] (TAIR:AT5G64650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46445.1); contains InterPro domain Ribosomal protein L17; (InterPro:IPR000456) Range:  from: 3035041    to: 3036562    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g09780.1    Description:  transcriptional factor B3 family protein. similar to transcriptional factor B3 family protein [Arabidopsis thaliana] (TAIR:AT2G16210.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82372.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) Range:  from: 3036957    to: 3038485    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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