Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 <---------ALFIN1                                                                             ----------->RAV1(1)                                                                             --------->DEAR3(1)                                                                             <---------ALFIN1                                                                           <---------RAP2.6(3)                                                                           <---------ATERF1(1)                                                                           ------>NtERF2                                                                          --------->RAP2.3(2)       <                                                                          --------->RAP2.3(3)      <-            --------->TGA1a                                               --------->RAP2.6(2)      --            <---------TGA1a                                               --------->ATERF1(2)      <-            <---------At4g35610                                           --------->DEAR3(1)       <-            --------->At4g35610                                           <---------ATERF1(2)      --            --------->ZAT2                                                >>>>>>>>>AtERF-3         --            <---------ZAT2                                                >>>>>>>>>AtERF-2        <--            <---------O2                                                  --------->ANAC46        ---           ------>NtERF2                   ------>ZmHOX2a(1)              >>>>>>>>>AtERF-1       ----          <---------ALFIN1               ------>ZmHOX2a(2)               --------->RAP2.3(1)    <---- -----ARR14(2)                         --------->ARR14(2)                --------->ERF1       <------ ---->ARR14(2)                         <---------ARR14(2)   --------->ANAC46<------NtERF2    <------NtERF2 -----ARR11(1)                       <---------YAB1        <---------LBD16>>>>>>>>>AtERF-4  <-------- ----CCA1(2)----------->RAV1(2)  --------->GLK1(1)       ----------->HVH21>>>>>>>>>AtERF-5 <---------DEAR3(1) ->RAP2.6(2)--------->O2         <---------GLK1(1) <---------GLK1(2)     --------->MYB46(3)<---------MYB46(3)   tccattttagtgccacctggcacgagtctctgaagaattctgatcctctcactgattctctcacggcgatgtctagccgccacactctgagggtcgtcgg  3026700                --------->ALFIN1                <-------GAMYB              <---------ANAC58           <---------RAP2.6(2)        ----------->HVH21       <-----------HVH21      --------->ANAC58      ==================MYC_MYB      ===================================MYC_MYB      ==================MYC_MYB      --------->ANAC55(2)      --------->ANAC46      --------->TGA1a      <---------TGA1a      <---------O2      ====================================MYC_MYB      <---------ANAC55(2)      --------->ANAC55(1)      --------->O2      --------->ANAC58      ====================bZIP_DOF   ------>ZmHOX2a(1) ------>ZmHOX2a(2)                  <---------ANAC58 ------ZmHOX2a(2)                   <---------ANAC46 --------ARR14(3)                   <---------ANAC58 ------->ARR11(3)                  --------->ZAT2 --------ARR11(3)                  <---------ZAT2                      <---------------AtSPL8 --------ARR14(2)                 <---------MYB46(3)                   --------------->AtSPL8 ------->ARR14(2)           ------------>AtMYB77                      ------>ZmHOX2a(2) ------->ARR14(3)        <---------ANAC58                            <------ZmHOX2a(2) -------GLK1(1)<----------DOF2    --------->MYB55(2)                --------->ARR11(3) ------>GLK1(1)<---------MYB46(3)<--------P                         <---------ARR11(3) ------->ARR10<---------ANAC46  <-------GAMYB             <---------ANAC58                          - --NtERF2 --------->SPL7 <---------ANAC58                 <---------AtLEC2                         -- ---DEAR3(1)  <---------ANAC58 <---------MYB46(3)         <---------ANAC58           --------->TOE2(3) ---HVH21--------->MYB52(1)----------->HVH21  <-----------HVH21  <------NtERF2 <---------ICU4   -----   agatcctcacgttacggcgtttgggtttcttgacggttgctgggtcgatgtcaaccgattgcatggctgcgatcttgtacatcatttccttcatagcacc  3026800             <-------TEIL            --------->ARR14(2)                                 <---------MYB46(3)            <---------ARR14(2)                          <---------AtMYB61      <---------HSFB2a(2)                               --------->ALFIN1      --------->HSFB2a(2)                    --------->LBD16 <-------GAMYB    ------>ZmHOX2a(1)                    ------>ZmHOX2a(2)  <---------MYB46(3) -------->ARR14(2)                      <---------GLK1(1)   --------->MYB55(2) ------->GLK1(1)            ---------->ID1 <---------LBD16 <---------AtMYB61 ---->DEAR3(1)  <<<<<<<<<TBF1          <---------ARR11(3)<---------MYB46(3)        <------ZmHOX2a(1)   gagttcctctagaggttcttcttcgtcttcgtcgtcttcttgatctccggagagaagagtggtggttgtgagggaagaagagagaggagggaaatgagaa  3026900                                                                                     <---------ICU4                                                                                    <---------YAB1                             --------->ZAT14                                      --------->YAB1                             <---------ZAT14                                      <---------ICU4                             --------->ZAT18                                     <---------YAB1                      <---------ZAT2                                            --------->ARR11(3)                      --------->ZAT2                           <---------YAB1  --------->YAB1                      <---------At4g35610                    <--------HAHB4   <---------YAB1                --------->CCA1(2)                            <---------ICU4   --------->ICU4               <---------ARR11(3)                           <---------YAB1  --------->YAB1               --------->ARR14(2)                         <--------HAHB4 --------->YAB1               <---------ARR14(2)                         <---------ICU4<---------YAB1               --------->ARR11(3)                         --------->YAB1--------->ICU4 <---------YAB1               --------->ARR11(1)                        <------ZmHOX2a(2) <---------YAB1           <       <------ZmHOX2a(1)  <---------ANAC46        --------->ATHB12<---------YAB1<---------ARR11(3)  <   ---------->DOF2    --------->At4g35610    <---------SPL7 --------->ICU4 --------->ICU4           <   gaagagaaaggattgaagatatggagctgtgtgtactggtccatggccataccgattggatcattattatgttgatgatgatgatcatcattcttgttgt  3027000                                                                      --------->YAB1                                                                  <---------AHL20(2)                                                                  -------->HAHB4                                                                 --------->ICU4                                                               <---------ICU4                                                               --------->YAB1          <-------GAMYB                                       <---------YAB1         <---------MYB46(3)                                   --------->ICU4       --------->At4g35610                                   <---------AHL20(1)                  ----       <---------At4g35610                                   <---------AHL20(2)             ---------     <---------RAP2.6(2)                                     --------->AHL20(2)         <------MYB46(1)    <---------At4g35610                                     --------->YAB1 <---------YAB1  <-------TEIL ---------MYB46(3)                    <---------HSFB2a(2)  <---------YAB1<---------ICU4 <---------MYB46(3) ---------REM1(1)                  --------->ICU4     <-------TEIL<---------ICU4        <------MYB83 -----------RAV1(1)           ----------->GT1  --------->CCA1(2) <---------YAB1        --------->MYB59   tgttgttgctgctgttgatgatgttgttccaagtgtaattttggaagagagatgggttcatattataattattcataatttttgtttgtttggttcgtaa  3027100                                                                     ----------->GT1                                                                     <----------ID1                                                                    <---------TOE2(3)                                <-----------TBP                   ---------->DOF2                                <---------AHL20(2)           <---------AHL20(1)                                --------->AHL20(2)           --------->AHL20(1)        <---------ANAC58      <-----------TBP               <---------AHL20(2)      <---------YAB1<---------ANAC58                      --------->AHL20(2)            --------->YAB1  --------->AHL20(2)<---------ANAC46                      <---------AHL20(2)           <---------YAB1  <---------AHL20(2)<---------ANAC58                      <-----------TBP        --------->DAG2 ----->ICU4    <---------DEAR3(1) <---------AHL20(2)    <-----------TBP        ---------->DOF2 -->GT1 <---------ANAC58     ------->TEIL               --------->AHL20(2) ---------->DOF2   aaattttaatgcttgaggcgatgcttatatgtatatatatatgtgtgtgtgtgagcatatatatatattaaaggaaaaaaagaaaggtgatcatatgatg  3027200         <------MYB46(1)         <------MYB83        --------->MYB111(2)        <---------AtMYB61                                                                --------->TGA2(2)        --------->MYB46(2)                                                              <-----------HVH21        --------->MYB55(2)                                              <----------DOF2==============        <---------DEAR3(1)                                              =========================bZIP_DOF        <---------MYB46(3)                                           ------->TEIL      ==============        --------->MYB111(1)                                   --------->AHL20(2)       --------->bZIP60(2)       <--------P                                        --------->AHL20(2)            <---------bZIP60(1)       <---------MYB55(1)                                --------->AHL20(1)            --------->bZIP60(1)     <------MYB46(1)                                     <---------AHL20(1)            --------->TGA1a     <------MYB83                                        <---------AHL20(2)            --------->ANAC58    --------->MYB111(1)  --------->ARR11(3)             --------->AHL20(2)             --------->ANAC46    --------->MYB46(2)  <------ZmHOX2a(1)               <---------AHL20(2)             --------->ANAC58    <---------AtMYB61 <---------TOE1(3)       ---------->DOF2 <---------AHL20(2)<------------ATHB5 --    --------->MYB59   <---------TOE2(3)  --------->AHL20(2) <-----------TBP------------>CBF      <---  <--------P   ------------>CBF    ----------->GT1--------->YAB1    <---------CCA1(2)  <---------TGA1a   aggggttaggttggtgatgcaattaaggattttggttcggagaaaaaataaagaataattttatttatatgtatcttttcaataagtggacgtcactagt  3027300                 --------->AHL20(2)                 <---------AHL20(2)             ----------->GT1          ---------->DOF2    ---------->DOF2  ----------->GT1 ==============bZIP_DOF                                                           <---------DAG2 ==============bZIP_DOF                                               <---------TOE2(3) ------->DOF5.7(2) <------------CBF                          ----------->GT1      <----------DOF2 ------MYB46(3) --------->AHL20(2)  --------->YAB1      --------->LBD16   <---------REM1(1)   cgttaccaaagaaaaagattaaattgtatatagttgaataagaagtttttttatgctccgaaaatgtttataaacgttgtagcacttttgtatacatata  3027400                                              >>>>>>>>>>WRKY6                                             --------->WRKY12                                           <---------At4g35610                                           --------->At4g35610                                         <-----------RAV1(2)                                     <---------At4g35610                                     --------->At4g35610                                     <---------ZAT2           <---------DAG2            --------->ZAT2           <----------DOF2        --------->At4g35610                                   ----------->RAV1(1)     <---------ARR14(2)           <---------At4g35610                                   <---------ALFIN1     --------->ARR14(2)     <---------AHL20(2)>>>>>>>>>>WRKY11               --------->GLK1(1)     <---------ICU4        <---------AHL20(2)--------->WRKY38(1)             <---------GLK1(1)   gttggcataatcgcttttttttttttttttttaatgagcagctccagttgactaatgagatagttttgagttggctagggtttccctctcccacattgag  3027500                            <----------DOF2                           <---------ANAC58                           <---------ANAC58                     --------->DAG2                    ---------->DOF2---------->DOF2 <---------ICU4              <---------DAG2                 <---------HSFB2a(2)               <-----------GT1   ----------->GT1    ------->TEIL                 --------->HSFB2a(2) ----------->GT1 --------->MYB46(3)     <-----------GT1        <---------TOE2(3)  <---------ANAC46--------->AHL20(2)   --------->YAB1 <----------DOF2   acttgaatttagggtatatcgagaaagtggctttcaccaaagtaataaactaataaccactagctataagaatgtgaattactttatatgaacatgagtt  3027600  Previous    Next  AGI:  At5g09750.1    Description:  HEC3 (HECATE 3); DNA binding / transcription factor. Identical to Basic helix-loop-helix protein 43 (BHLH43) [Arabidopsis Thaliana] (GB:Q9LXD8); similar to EDA33/IND (INDEHISCENT), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G00120.1); similar to hypothetical protein OsI_026567 [Oryza sativa (indica cultivar-group)] (GB:EAZ05335.1); similar to hypothetical protein OsJ_024744 [Oryza sativa (japonica cultivar-group)] (GB:EAZ41261.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 3026402    to: 3027076    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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