Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        <-------TEIL     --------->CCA1(2)  <---------KAN4(2)                                                             --------->At4g35610  ----------->ARR10                                                          <---------At4g35610 -------HSFB2a(2)                                                            --------->At4g35610 ------>HSFB2a(2)                                                         <---------At4g35610 ------>LBD16                                                             --------->At4g35610 ------LBD16                                                    <---------ALFIN1<---------At4g35610 ------HSFB2a(2)                                    ------>NtERF2   <-----------HVH21 ------ANAC46               <-----------GT1       <---------At4g35610    --------->ARR14(2) ----->HSFB2a(2)        <---------TOE2(3)         --------->At4g35610    <---------ARR14(2) -----LBD16         <------ZmHOX2a(2)           ------>ZmHOX2a(2)  --------->DEAR3(1) ------>NtERF2   cgggaagattcaagtctatgcgatctaatgtttccttctcaatggtttgatcggctcccattactaacaccgtcgcatctgcagatgccgctagagtctt  3004700                                                                       ------>ZmHOX2a(1)                        --------->ANAC58                           <-----------HVH21                        --------->ANAC58                          --------->DEAR3(1)                        --------->ANAC46                    <---------WRKY45                 <---------DEAR3(1)                         <---------WRKY38(1)              <-------             ------>NtERF2           --------->MYB46(3)    --------->WRKY18(1)     ---------->DOF2            --------->ANAC46 <---------O2           <----------DOF2--------->ORA47(1)     --------->ALFIN1         --------->ARR14(2)  <---------ANAC46  --------->YAB1  <---------ALFIN1    ==================         <---------ARR14(2)  --------->O2     <---------YAB1<---------WRKY12     ------>ZmHOX2a(1)   ggctgagtctaaatccgcctcggtgcaagtcacgttgaaacagccacgatgatactttgtggtcaacaccgtcctctcaagtccttgaagcggtgttgta  3004800                    --------->YAB1            ----------->RAV1(2)           ------>NtERF2                   <-------MYC2          --------->ANAC58                 ------->MYC3          --------->ANAC58                 <-------MYC3          --------->O2                  <---------ALFIN1          --------->TGA1a              ------>ZmHOX2a(2)          --------->ANAC46     <---------YAB1 <---------TOE1(1)   <---------AHL20(2)     --------->ANAC46         --------->AHL20(1)                 --------->AHL20(2)     --------->ANAC58         <---------AHL20(2)                 <---------AHL20(1)        --------->TOE2(3)     --------->ANAC58         <---------AHL20(1)                 --------->AHL20(1)     <-----------GT1 --ANAC46 <---------ALFIN1   --------->AHL20(2)                  <---------AHL20(2)  ------->TEIL ===================bZIP_DOF --------->YAB1------->MYC2         --------->AHL20(2)<---------YAB1   tacttgcaagccacgcctgaaaacataacaattatatttgatccacgttcgaggtttgagtttaaaattaatttgatataagttatgaatttaccttcgt  3004900                                              <---------WRKY38(1)                           ---------                                          <---------RAP2.6(2)                         <---------ZAT2                                         --------->RAP2.6(3)<---------ANAC46          ----------->RAV1(2)                  ----------->HVH21    --------->ARR14(2)   <---------ANAC58          --------->At4g35610       --------->YAB1                  <---------ARR14(2)   <---------ANAC58          --------->ZAT2      <---------ATHB12             <-----------------AGL1  <---------LBD16            <---------At4g35610      <---------YAB1            <------MYB83  <---------WRKY12<------NtERF2    <---------MYB52(2)    ------>ZmHOX2a(1)           <------MYB46(1)--------->MYB52(1) <------ZmHOX2a(1) <-----------RAV1(2)   aatttcctatcatagtttttgtgacattagcatttggtccgattacggccaacgtcttgatggcggaaggagagagcggtagcgaaccagctgagttctt  3005000                                                                    <---------PCF2                                                           --------->ANAC58                                                           <---------TGA1a                                                           --------->TGA1a                                                           --------->bZIP60(2)                                                           --------->ANAC46                                                           --------->ANAC58                                                         <---------ALFIN1     ----------->RAV1(1)                                                      --------->REM1(2)     --------->MYB46(3)                                                      <---------ZAT18     --------->ANAC46                <---------ANAC58                      <---------ZAT14 --------->ANAC58                <---------ANAC58                      --------->ZAT14 --------->ANAC58           <---------ANAC58                          --------->AtLEC2--------->PCF2  --------->ANAC58     <---------ARR14(2)          ------->GAMYB------>ZmHOX2a(1)         <---------GLK1(2)  --------->ANAC58  <---------ANAC46               ==================MYC_MYB<---------MYB55(2) >ARR11(3) <---------ANAC58 <---------LBD16     <-----------GT1 XXXXXXXXXXXXXXXXXXXX>MIR2111A* <-----   gagcaagacaatgccttgccttgcggtttctacggctagttctcggttttcaaccgtgcacacgtccttgggacccaaaccaccatatggctgattcttc  3005100                 ------>ZmHOX2a(1)                --------->TOE2(3)             <---------ARR14(2)        ---------->DOF2                                        --------->At4g35610       <---------WRKY12                                        <---------At4g35610      <---------------------WRI1                     <----------DOF2     <-----------HVH21                              <---------ANAC58  <---------At5g28300                               <---------ANAC58        <------ZmHOX2a(2)  <---------DOF5.7(2)        *TSS     <------------CBF ----------->GT1<---------ANAC46   <---------WRKY18(1) ----LBD16   --------->GLK1(2)  ----------->GT1 <------------CBF  --------->At4g35610   ----------->HVH21   gggttaccgtcaaagaatcctaagcgcatcagagtcgcaaaattgtttgaaattgctttgttaatagctgcttcgtcgatcagccccttcttgaccgcat  3005200                                                                        <---------LBD16                                                                       ------>ZmHOX2a(1)                                                                 --------->At4g35610                                                                 ------>NtERF2                 ---------->DOF2            ------>MYB83         <---------At4g35610        <--------               --------->ANAC58    <------ZmHOX2a(2)          ------>NtERF2               <---------ZAT14               --------->ANAC58   --------->AGP1           <---------At4g35610            --------->ZAT14       <-------GAMYB   --------->MYB46(3)   ------>MYB46(1)--------->At4g35610       <---------ZAT14      <---------MYB46(3) ------------>CBF --------->TOE1(2)--------->ZAT2 --------->ZAT14<---------ZAT6   tctctgtgtggttacccaagaaagaaccacaatttagatccaaacctgccagtatagatttagctgccgcttcctctggagtcttggtatagtgttgtga  3005300                                                                                        ------->TEIL                    --------->ANAC58                                                  --------->ZAT14                    --------->ANAC58                              --------->ZAT18     --------->ZAT18               <---------ATHB12                              <---------ZAT14          <---------ZAT14             ------>MYB46(1)            --------->TOE2(3)<---------AGP1          xxxxxxxxxxxxxxxxxxxx             ------>MYB83   --------->LBD16             <------MYB46(1)          xxxxxxxxxxxxxxxxxxxx           <---------MYB59 --------->ANAC46          <---------MYB52(1)          xxxxxxxxxxxxxxxxxxxx          --------->ANAC55(2)           <---------MYB59<---------AtMYB61     <---------ZAT2 --------->AtLEC2 ------->TEIL        ------->TEIL   --------->LBD16         --------->ZAT2      ---- -ANAC46  <---------ANAC55(2)     --------------->AtSPL8<------MYB83   xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   accatacaaaatacctaatgaatcgcaatccgaaacaatgtacctaaaacaaacccgtaggtctggactgcccaatccaagctgtgagtgaaccgtatga  3005400                   --------->SPL1(2)                   --------->SPL7                  <---------SPL1(1)                  <---------MYB52(1)                  --------->SPL1(1)                 <---------SPL1(2)                <---------ANAC58               <---------------AtSPL3              <------------------SPL14            <------MYB46(1)            <------MYB83           <---------AtMYB61       <---------HSFB2a(1)       --------->HSFB2a(1)    <---------TOE2(3)                                         --------->ZAT2      ----------->ARR10  xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                   ------>MYB83  ---------      <---------TOE1(3)<--------P                       <---------ANAC58      ------>MYB46(1)     <-- ------>MYB46(1)<---------ANAC58               <---------MYB52(1)    --------->DEAR3(1) <---------ZAT14 ------>MYB83------------------>SPL14        <---------ANAC58    --------->ZAT2         --------->ZAT14 xx>smallRNA(si3)<---------SPL7              <---------ANAC46    <---------ZAT2         <---------At4g35610 xxxxxxx>smallRNA(se3)<-------GAMYB <---------ANAC46    <---------ANAC58    --------->AtMYB61<------- xxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)        <---------ZAT14        <---------ZAT2 --->TEIL  --------->MYB59  ---------->DOF2  <---------ANAC58    --------->ZAT14        --------->At4g35610   accaagcgaaggtttggtccgtacggttgctaaaggttgagggtattgcgttaggctggcttcacagagcagcgactacctcccgctctcagcagtggat  3005500                                    <---------MYB52(1)                                   <---------At4g35610                                   ----------->RAV1(2)                     --------->ARR14(2)      --------->SPL7                --------->ANAC58   --------->At4g35610                --------->ANAC58 ------>ZmHOX2a(2)          ---------->ID1        --------->ARR14(1)                               <---------AHL20(2)       <-------TEIL  <---------ARR14(2) <---------ANAC46                <---------MYB52(1)      --------->ARR14(2)       <---------ARR14(2)     xxxxxxxxxxxxxxxxx>smallRNA(fl3) <---------ALFIN1   --------->GLK1(1) ------>NtERF2   xxxxxxxxxxxxxxxx>smallRNA(fl3)             <--- >ALFIN1--------->MYB52(2)     --------->ARR14(2) <---------ZAT2    <-----------GT1              ---- -------PCF5<-----------TGA1 ----------->ARR10    --------->ZAT2 <---------AHL20(2)              <--- --MYB46(3) <-----------HVH21<---------YAB1<---------SPL7--------->MYB46(3)     --------->AHL20(2)   ggaccacggttcgtcgtcacacaaatccactatgatccgctggctcgtacccagcttgaaccaccatttttttcgttacattttaaattgctaactcatt  3005600  Previous    Next  AGI:  At5g09700.1    Description:  similar to XYL4 (beta-xylosidase 4), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G64570.1); similar to BXL3 (BETA-XYLOSIDASE 3), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G09730.1); similar to alpha-L-arabinofuranosidase [Raphanus sativus] (GB:BAE44362.1); contains InterPro domain Glycoside hydrolase, family 3, C-terminal; (InterPro:IPR002772) Range:  from: 3003721    to: 3005129    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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