Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------->LBD16                                          --------->ARR14(2)                                          <---------ARR14(2)               --------->GLK1(2)                              <---------TOE1(3)                            --------->ARR14(2)                             <-----------RAV1(2)--------->ARR14(2)         <---------ARR14(2)                          <---------GLK1(1) <---------LBD16                --------->ARR11(3)                          <---------ZAT2 <---------GLK1(1)                 <---------ARR11(3)                          --------->At4g35610--------->HSFB2a(2)         ---------->TaMYB80      <---------GLK1(2)   --------->ZAT2 --------->GLK1(1)               ----------->ARR10     <----- ------TOE2(2)            <---------At4g35610<---------HSFB2a(2) <---------ZAT2               ------>ZmHOX2a(1) -------RAV1(2)    <----------DOF2       <---------HSFB2a(1)     --------->ZAT2      --------->ZAT14<   aggttttggaatctctggcatctttgggagctcaggttttggaatttccggaaacttgggcaattcaagcttgggaatatctggcagtttagtttcctca  2960900                                                   <----------DOF2                                                  ------>ZmHOX2a(2)                                                 <------ZmHOX2a(2)                                                --------->ARR11(3)             <---------MYB52(1)              --------->LBD16            --------->LBD16                 <---------LBD16           --------->ANAC46                <---------LBD16          <---------LBD16               --------->HSFB2a(1)                 <---------ANAC46       <---------HSFB2a(1)              <---------HSFB2a(1)               --------->GLK1(2)       --------->HSFB2a(1)            <---------GLK1(2)   --------->At4g35610       <---------HSFC1(2)       <---------ANAC58--------->ARR14(2)       <---------ARR14(2)     <---------GLK1(2)          <---------ANAC58<---------ARR14(2)      <---------GLK1(1) ------RAV1(2)            --------->ZAT6<---------HSFC1(2)<---------At4g35610   <--------P        <-- ----------DOF2   <----------DOF2<----------DOF2<---------ARR11(3)<----------DOF2        <---------WRKY38(1)   ggctttggaatctccggtacctttggtaactctggctttggaatctccgggatctttggcaactcaggctttggaaattcgggtaacttgggcaactctg  2961000                                                                                   ------->GAMYB                                                                                   --------->TOE1(2)                                                                                   --------->TOE2(2)                                                                                  <---------LBD16                                                                                  --------->DEAR3(2)                                                                                 --------->MYB52(1)                                                                          ------>ZmHOX2a(1)    ------                                       --------->At4g35610              ------>ZmHOX2a(2)    --------                                       <---------ZAT2                  <------ZmHOX2a(2)     --------                                       <---------At4g35610            <---------ARR11(3)     --------           ------>NtERF2             <--------P                       --------->ARR11(3)    ---------           --------->LBD16        --------->MYB59--------->ICU4       <---------ARR14(2) <---------ZAT2         <---------LBD16          <---------TOE2(3)                   --------->ARR14(2) <---------ABI4(2)      <---------GLK1(1)--------->HSFB2a(1)  --------->ANAC58         <------ZmHOX2a(1)  --------->ANAC58      --------->GLK1(1)<---------HSFC1(2)   --------->ANAC58       <---------TOE2(3)    --------->ANAC58    <---------ZAT18    <---------HSFB2a(1)  --------->ANAC46<---------LBD16    <---------ATHB12------ --------DOF2          --------->HSFC1(2) <-----------RAV1(2) --------->LBD16  --------->MYB46(3)   gtttagggaactccggcaacttgggaacttcgaatttaggtagctcaggcaattttggtatctccggtttaggatcctccaataaccggcgagcaccgac  2961100      <-----------HVH21      <---------ARR14(2)      --------->ARR14(2) --------->MYB52(1)                                          <---------At4g35610 >MYB46(1)                                                   --------->At4g35610 ->MYB46(3)                                                  --------->ZAT2 ->DREB2C(2) --------->ANAC58                                <---------ZAT2              --------->ICU4 ->DEAR3(1)  --------->ANAC58                               ----------->RAV1(1)  <---------ICU4  <--- >DEAR3(2)--------->At4g35610             --------->ALFIN1--------->At4g35610  --------->TOE2(3) <--- >MYB83<------ZmHOX2a(2)        <---------YAB1  <---------YAB1                --------->ATHB12  <----   tgaaaacggatcagcgagcaatgcgataagacatatgatcagaagtggtgatgagagaagagcagcagagagactcttcttcattagtgccatgtttgag  2961200                                                       <----------DOF2                                                      <---------ANAC58                                                      <---------ANAC58                                               <-------GAMYB                                              <-----------RAV1(1)                <----------DOF2                            <----------DOF2   --------->MYB52(2)                ------>ZmHOX2a(2) <---------ANAC58  <---------MYB46(3)         <---------MYB46(3)               <---------YAB1 <---------ANAC46  --------->MYB52(2)     <---------ANAC46                    --------->ARR11(3) <---------ANAC58<---------MYB52(1)  <-----------RAV1(1)                      <---------ARR11(3) ------ANAC58  <---------ANAC58   <----------DOF2<-----------RAV1(1)     --------->GLK1(2) ------ANAC58  <---------ANAC46  <---------ANAC58<---------MYB46(3)      --------->ICU4             < -----At4g35610<---------ANAC58  <---------ANAC58<---------REM1(1)      *TSS<---------YAB1        <--   cttgcttgagaactcttgcgtttgtttcttcttttgcttttgtggtgtttgttgttgctttgtgtttgtgatgagattatgatctttgattcgaatgggt  2961300                                                  --------->REM1(2)                                            --------->ARR14(2)                                            --------->GLK1(2)                                            <---------ARR11(3)                                            <---------ARR14(2)                                            <-----------ARR10                                            --------->ARR11(3)                                       ----------->GT1                                   <---------ANAC58                                   <------MYB83   --------->ZAT14                                   <------MYB46(1)<---------ZAT14            --------->MYB52(2)                                   <---------ANAC58                         <-------TEIL                                   <---------ANAC46                      <---------HSFB2a(1)                                  --------->MYB111(2)                   --------->DAG2                                  --------->MYB111(1)                   <---------------AtSPL8                                  --------->MYB46(2)                  ---------->DOF2               <------ZmHOX2a(1)  <---------MYB46(3)               --------->YAB1 ---------->DOF2      ---------->DOF2<---------ANAC46              --------->AHL20(2)              <- ---------AHL20(2) >>>>>>>>>TBF1  <---------AtMYB61             ----------->GT1                    -- ---------TBP<---------TOE2(3)    --------->MYB55(2)            --------->YAB1    <-----------GT1 <--   atttaaaggtgttttgaggaagaagaaagatggagtttggtgggaaaatctgtgcagagttttgaataataaaaaaggttcgtttaacttctctatctgt  2961400                                                                     --------->ANAC58                                                                     --------->ANAC58                                                                     --------->ANAC55(1)                                                <---------ANAC46     --------->ANAC55(2)                                                <---------ANAC55(1)  ----------->GT1                                                <---------ANAC58     <---------ANAC55(2)             <----------DOF2                    <---------ANAC58     --------->ANAC46 --------ARR11(3)                               <---------ANAC55(2)<---------ALFIN1 ------->ARR11(3)              <-----------GT1  --------->ANAC55(2)--------->REM1(1) -------CCA1(2)  --------->WOX13(1)       <---------ZAT6         --------->CCA1(2)   atatctatattgtcactttcaatctagttgaattttcggttttagtgtttacgtgttcatgtttaagctacacgtaaaaaggcttaaactttgtaaacta  2961500                                                  <-----------GT1                                             <---------AHL20(2)                                             --------->AHL20(2)                                         --------->AHL20(2)                                         <---------AHL20(2)                                     --------->YAB1                                     --------->AHL20(2)                 --------->YAB1               --------->ARR14(2)    <---------AHL20(2)         --------->DAG2                <------ZmHOX2a(2)               <---------ARR14(2) --------->WOX13(1)           ---------->DOF2          <---------ANAC46   gagaatagcattttgcaaatactatgacacaaatatcaattatataatttataaactgtatacaaaaaagctaatgaaaatcaagatgggacttggatca  2961600                                                                             <---------TOE1(3)  <---------ANAC55(2)                                          --------->YAB1<---------TOE2(3)  <---------YAB1                                    --------->ZAT6       <----------DOF2      -------  --------->ANAC55(2)   <---------ICU4     <---------TOE2(3)  <---------ATHB12----------->GT1 <------   aattatgtaagtcttaaaaactctagtcatttcgatattgattttgagataaaaacactaactaatcaaaacttgttttaaggtgaaacgtttgcacatg  2961700                  ---------->DOF2                <---------YAB1                                                             <---------ANAC58    <---------RVE1(1)                                  <---------MYB52(1)                  <---------ANAC58    <---------CCA1(1)                 <---------YAB1<---------ANAC46                 <---------TOE1(3)   --------->ARR11(3)    ----------->GT1   --------->MYB59                           <---------TOE2(3)   <---------ARR11(3)   ----------->GT1    <---------TOE2(3)      --------->MYB52(1) <---------YAB1 >MYC3       --------->ICU4  --------->AHL20(2)     <---------ORA47(1) <---------ANAC46    <---------ANAC46 -MYC3    <---------AtLEC2  --------->YAB1 <---------TOE1(3)   --------->ANAC46  <----------DOF2-----   aattagatatttgcaagtatgaaagggcgataaaaatatgatgtttaggttttggccggtaatctacacaacgacttggattgttttatggttgtgtgta  2961800  Previous    Next  AGI:  At5g09530.1    Description:  hydroxyproline-rich glycoprotein family protein. similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT5G09520.1); similar to surface protein PspC [Streptococcus pneumoniae] (GB:AAF73793.1); similar to surface protein PspC [Streptococcus pneumoniae] (GB:AAF73783.1); similar to surface protein PspC [Streptococcus pneumoniae] (GB:AAF73794.1); contains InterPro domain Cell surface antigen (InterPro:IPR004829) Range:  from: 2959735    to: 2961272    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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