Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  <---------LBD16                                                               <---------LBD16              <-----------RAV1(1)<----------DOF2    --------->RAP2.6(2)        <---------LBD16            <---------At4g35610---------->ID1       --------->DEAR3(1)       <---------ZAT2  <---------DOF5.7(2)   <------MYB83                --------->ANAC46        <---------HSFB2a(1) -------->DOF5.7(2)     <------MYB46(1)             ------->GAMYB--------->LBD16         <---------YAB1 ------->TOE1(3)    <---------REM1(1)              --------->DEAR3(2)     ---------->DOF2--------->ICU4 ------->TOE2(3)   <---------TOE2(3)               --------->MYB46(3)    <------ZmHOX2a(1)--------->ATHB12   acgttaacctcttcaactgttgatgtaggttttgtcttttcagtctttggcaaaccgccattaacaccgggaataggaaagctcggaaaccatgatggaa  2951300                                                             --------->LBD16                                                      <---------GLK1(2)                                                  <---------LBD16                                               --------->HSFC1(2)              <---------HSFB2a(2)                                               <---------HSFB2a(1)             --------->HSFB2a(2)                                               <---------HSFC1(2)              --------->HSFC1(1)<---                    <----------DOF2           <---------ARR11(3)     <-----------RAV1(2)         ----              ----------->RAV1(2)             --------->ARR14(2)--------->ARR14(2)               ----        <---------WRKY18(1)                  <------ZmHOX2a(1) <------ZmHOX2a(1)       <-----------RAV1(2)       --------->WRKY38(1)                <---------LBD16   <---------LBD16   <---------LBD16   <----       --------->WRKY12     --------->ARR14(2)<---------ARR14(2)<---------ARR14(2)<---------GLK1(2) <   attcaaatgttgacccttctggctcttctggttcttcgggctcttcaggaacttcgggttctccaggaacctcaggctcttctggaatctcaggctcttc  2951400                                       <---------HSFB2a(2)                                       --------->HSFB2a(2)                                       --------->HSFC1(1)                           <---------ARR14(2)                          --------->ATERF1(1)                          --------->At4g35610               --------->ARR14(2)                          --------->ZAT2                    --------->GLK1(2)                          <---------ZAT2            ------>NtERF2                          <---------At4g35610    ------>NtERF2                          <------NtERF2<---------HSFC1(1)  <---------GLK1(2)                         <---------ATERF1(1)     --------->LBD16                     ---------->ID1                         ----------->ARR10--------->ARR14(2)<---------ARR14(2)      <-----------GT1              <---------LBD16    --------->ARR14(2)--------->ARR14(2)         <---------DAG2             ------>ZmHOX2a(1)   <---------ARR14(2)<---------ARR14(2)        <---------HSFB2a(1)          <---------ATERF1(1)<---------LBD16--------->HSFB2a(1)         <---------HSFC1(1)         --------->ARR14(2)--------->ARR14(2)  <---------LBD16          <---------HSFB2a(2) ------HSFB2a(2)  --------->ALFIN1    <---------LBD16  ------>ZmHOX2a(1)--------->HSFB2a(2) ----->HSFB2a(2) <-----------HVH21<----------DOF2<---------ATERF1(1)   <---------LBD16 ----->HSFC1(1) --------->LBD16------>NtERF2<---------HSFB2a(1)<---------ANAC46<----------DOF2 -----LBD16--------->ATERF1(1) --------->LBD16--------->MYB52(1)    <---------ARR14(2) ---------GLK1(2)<---------MYB52(1)  ----------->RAV1(2)<-----------RAV1(2)  --------->HSFB2a(1) ----   tggaatctcaggctcctccggtgagggcagctccggctcttctggaacttccggctcctcaggttctgtgtattctggaacctttttgacctcttcttgc  2951500                                                                  --------->ANAC58                                                                  --------->ANAC46                                --------->ALFIN1                  --------->ANAC58            <------ZmHOX2a(1)             --------->ZAT6     <---------REM1(1)            <----------ID1         <---------------- ------->RAV1(1)     --------->At4g35610                   ---------->DOF2       <------ZmHOX2a(1)   accagagaatgacttactctagcagcaaaactaggtgtagggaacaagagggacgatgaaataaagacaaggaacaagaccgaggagacgagaataggaa  2951600                                                                                               <-----                                                                                              *TSS                                                                                             <-------                    --------->GLK1(2)                                                        <-------               <---------YAB1                                                                --------            --------->ICU4           ------>MYB46(1)                  --------->ZAT14        --------    --------->TOE2(3)                ------>MYB83 ----------->GT1     <---------ZAT14     ----------- -------TaNAC69(2)  <---------YAB1--------->MYB46(3)             <---------ANAC46         <----------   ggcgaacattagtcattgtgatattcttgaatcgaaaccaacttagaaagatgagttaaacaatgttgtgagtatagagagtttgtgttttgctatatat  2951700                                                                                      <------ZmHOX2a(2)                                                                                     --------->ARR14(2)                                                                                     --------->ARR11(3)                                                                                     <---------ARR14(2)                                       --------->ARR11(3)                            <-----------ARR10                             <---------At4g35610                                     <---------AGP1         ----------->GT1     --------->At4g35610                                     <---------ARR11(3) -------CBF             <------------CBF ------>ZmHOX2a(2)                           <---------ARR14(3) --AHL20(1)           --------->AHL20(1) <XXXXXXXXXXXXXXXXXXXXMIR2111A/B             --------->ARR14(3) --ARR11(3)           <---------YAB1   <---------ARR11(3)                   <------MYB46(1)  <------- ->ARR11(3)           <---------AHL20(2)<------ZmHOX2a(2)                   <------MYB83     <------- ->AHL20(1)          --------->YAB1   --------->GLK1(1)               <---------AHL20(2)     -------- ---->AGL15          --------->AHL20(2)--------->AGP1   --------->YAB1--------->AHL20(2)   --------->ANAC46 -----AGL15         <---------AHL20(2)<---------GLK1(1)<-------TEIL  --------->AHL20(2)------>ZmHOX2a(2)   tgtttacagaatggtttcttaaataatattgagatgagagagatcttagaatgtagattcataagagtcaaaaaaatttggtgagaagatctcactgcac  2951800                                                                                                -----                                                                                               ------                                                                                               <-----                                                  --------->ANAC55(2)                       ------>MYB83       --------->GLK1(2)                          --------->ANAC46                        <---------MYB59 --ZAT18                  --------->MYB46(3)    <-----------GT1            <---------TOE2(3)------>MYB46(1) --ZAT14                  <---------MYB52(2) <---------YAB1           <----------DOF2   ------->TEIL< ->ZAT14     <---------YAB1------->GAMYB  <---------AHL20(2)    <-----------GT1   <----------DOF2   <   gattgtgagaatgtgatgttagtcttcaacaaactcacctatatttcattatacgtcttagttgtataaccccttttaagtttactttcgaacctaatat  2951900                                         --------->TOE2(3)                                         --------->TOE1(3)                                       --------->ARR11(3)                                       <---------ARR11(3)                            <-----------HVH21          ---------->DOF2             --------->GLK1(1)                  <---------ANAC55(2) ---->AHL20(2)                        <---------GLK1(1)                  --------->ANAC46 --->AHL20(1)                      --------->ANAC58                      --------->ANAC55(2) ----AHL20(1)                      --------->ANAC58                      <---------ANAC58 -----------GT1                    --------->ANAC46                      <---------ANAC58       <---- ---------AHL20(2)          <---------ICU4  ---------->DOF2            <-----------GT1 <---------ALFIN1   atatacttgttttaaagctattgatactaaacattacaagaaatcttaaagttagcaatacctatattgtattttacgtctcatatgcatcaccccttct  2952000                 <---------YAB1               <--------HAHB4               <---------ICU4                                                       --------->ANAC58               --------->ATHB51            <---------AHL20(2)                       --------->ANAC46              <---------YAB1             <---------YAB1                             --------->ANAC58              --------->ICU4          --------->AHL20(2) <------------MYB.PH3(1)    --------->ANAC55(2)            --------->YAB1            <---------AHL20(2)<---------At5g28300       <-----------GT1 --------->TOE2(2)               <---------YAB1        <-----------GT1 --------->DAG2 ------DOF2<-------TEIL    --------->AHL20(2) <---------AHL20(2)      ---------->DOF2               <   ttacctgtgaacattcattattaatacatttacatatgattttattattttatcttgtaaccgtttcaagtgaaaagtgtatttttacgcattatgtaga  2952100            <---------TOE2(3)        --------->CCA1(2)   --------->AHL20(2)       --------->AHL20(1)  --------->AHL20(2)                                           ---------->DOF2       <---------AHL20(1)  <---------ATHB12          --------->AHL20(2)                <---------AHL20(2)      --------->AHL20(2)   <---------ATHB51         --------->AHL20(2)                 --------->AHL20(2)  --------->AHL20(2)       <---------AHL20(2)   --------->AHL20(1)                 --------->AHL20(2)  <---------AHL20(2)   --------->AHL20(2)       --------->AHL20(2)                 <---------AHL20(2) --------->YAB1 <------ZmHOX2a(2)               <---------AHL20(2)                 --------->AHL20(1) ---------YAB1<------ZmHOX2a(1)            --------->AHL20(2)                     --------->AHL20(2)   ttattaaaatatataaggatcaaaatcaaataattttaagacttataaaataaaataaaaaataagactgagataaaaaaaaaaaaaaattaaagactaa  2952200  Previous    Next  AGI:  At5g09480.1    Description:  hydroxyproline-rich glycoprotein family protein Range:  from: 2950915    to: 2951694    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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