Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            <---------At4g35610                                                                                          <-------GAMYB                   ------>MYB46(1)                                               <-----------GT1                   ------>MYB83                                                 <---------YAB1                   --------->MYB52(1)                                         <--------HAHB4                 <---------MYB59                                              <---------ICU4              ------>MYB46(1)                       <---------YAB1           <---------YAB1              ------>MYB83                 <---------AHL20(2)    <------ZmHOX2a(2)    <---------MYB52(1)            <---------MYB59            --------->AHL20(2)       --------->ARR14(2) <---------LBD16            --------->AtMYB61          <---------AHL20(2)       <---------ARR14(2)--------->MYB52(1)< <---------ZAT6  --------->AtMYB61    <---------AHL20(2)<-----------RAV1(1)<---------ZAT6--------->MYB52(2) -----DOF2>>>>>>>>>>MYB80  --------->YAB1<---------YAB1<---------YAB1  <---------ZAT14<-----------HVH21   ttagtgtaatcaaaccaaaccaaaccgaataaaaaccaaaattattttttgagtaatattgttgccgatcgagtttagtattattaccggtgagttgatc  2950100                                                                                --------->DEAR3(1)                                                                               <---------LBD16                                                                               --------->ATERF1(1)                                                                               <------NtERF2                                                                             --------->ANAC58                                                                             <---------DEAR3(1)                                                                             --------->ANAC58     ---                                                                            --------->ATERF1(1)   <--                                                                           <---------ATERF1(1)    <--                                                                       <---------ANAC58          ----                                                                       <---------ANAC58          <---                                                                       <---------ANAC46         <----                                                                      <---------LBD16           <----                                                                      <------NtERF2             <----                                                                    --------->ALFIN1            -----                                                                    <---------DEAR3(1)         <-----                                                                  <------MYB83------>NtERF2    <-----                                                                  <---------MYB46(3)           <-----                                                                  <------MYB46(1)             <------                                                                 --------->ALFIN1--------->LBD16-----                                                                 <---------AtMYB61<------NtERF2<-----                            ----------------->AGL1   ----------->RAV1(2)  --------->ARR14(2)  -------                        <----------TaMYB80           --------->At4g35610 --------->ATERF1(1)  <------NtERF2                       ---------->TaMYB80           --------->GLK1(2) --------->ATERF1(1)    <-------                       --------->ARR14(2)      ---------->DOF2 <------ZmHOX2a(1)<---------ANAC46-----                    <---------ANAC46       <------NtERF2  <---------ANAC46<---------ARR14(2) <-------             <---------TOE2(3)          <------NtERF2<---------At4g35610 <------NtERF2      <-------- <---------ALFIN1   ----------->GT1   --------->ALFIN1  --------->MYB52(1)----------->HVH21--------->At4g35610 ---------ZAT18---------->DOF2        ----------->HVH21----------->HVH21--------->LBD16    <---------At4g35610   agtccaccttcgtttaagaaagtcgtatatacccatacgggtggcagagtaaagcatctgacggaggatggtggcggagacgccggagaagagagcggcg  2950200  ------>ZmHOX2a(1) ------>ARR14(2) -------PCF2 -------ARR14(2)                                                      <---------ANAC46 ----->ATERF1(1)                                                      <---------ANAC58 ---NtERF2                                                          <---------ANAC46 -----MYB46(3)                                                   --------->ANAC46 -----DEAR3(2)                                         --------->ALFIN1 -----ATERF1(1)                                       ------->MYC3 <------NtERF2 ->NtERF2                                             <-------PIF5 --------->ATERF1(1) ----ANAC46                      ---------->DOF2      ------->PIF5<---------DEAR4(2) ----ANAC58                 <---------DEAR3(1)        ------->MYC2<---------ATERF1(1) ----ANAC58                --------->SPL7             <-------MYC3<---------ORA47(2) ---LBD16                 <---------ALFIN1            <-------MYC2<---------RAP2.3(1)            <--- ---->MYB55(2)            --------->STY1(1)          <---------ANAC46 <---------ANAC58         ------ ----DEAR3(1)             <---------STY1(1)          <---------ANAC58 <------NtERF2            <----- -->ATERF1(1)        <---------ZAT18        --------->MYB52(1)   <---------RRTF1(3)          <------ZmHOX2a(1) --DEAR4(2)          --------->ZAT18       ----------->HVH21     <---------RAP2.3(2)       <---------TOE2(3) ---->ABI4(2)     --------->ALFIN1         ----------->TGA1      <---------DEAR3(1)      --------->ICU4 --RAP2.3(1)      <---------ANAC58     <-----------HVH21         <---------RAP2.3(3)----------->GT1 -DEAR3(1)        <---------ANAC58 --------->DAG2    <---------ANAC58------>NtERF2 ----------->GT1   ggtccttcggttttgacaatgtgtgcccctacggcgaaaggggtcatgacggagcgcgtggaagaagacggcgcgtgaatgtgtaagggtaataaggaaa  2950300                                     <---------TOE2(3)                                     <---------TOE1(3)                                   <---------MYB52(1)                                 <------MYB83<---------LBD16                                 <---------DEAR3(2)                             <---------TOE1(3)                                 <------MYB46(1)                                <---------TOE2(3)                                --------->MYB46(2)       --------->YAB1    <---------ZAT6    <---------At4g35610         <---------DEAR3(1)      <---------YAB1    <---------TOE1(3) ------>NtERF2                  <---------MYB46(3)  --------->ARR11(3)    <---------TOE2(3) <---------At4g35610            --------->MYB59   ----------->ARR10 ----------->ARR10 --------RAV1(1)               <--------P<-----------HVH21          <---------YAB1                --- --->GLK1(1)            <---------ARR14(2)   --------->ANAC46       <---------TOE2(3)     --------->ETT(2) ----GLK1(1)            --------->ARR14(2)  <---------LBD16         <---------TOE1(3) <---------AtMYB61   tgctgccgatgagagagtcaagagcgaaaacgggtcggtaaggtttcacgggaagattatgatcaaggctaagattagggttagggttttggtcgagcga  2950400                                                                                 ------>NtERF2                                                                          <---------RAP2.6(2)                                                                          <---------DEAR3(1)                                                                          <---------RAP2.3(2)                                                                          <---------RRTF1(2)                                                                          <---------RRTF1(3)                                                                       <---------WOX13(1)                                                                     --------->ATHB12                                                                    --------->ICU4                                                                    <---------YAB1                                                                 <---------DEAR3(1)                 --------->At4g35610                           ------>NtERF2------>NtERF2                 <---------At4g35610                           --------->LBD16  <---------bZIP60(1)     --------->KAN4(2)                                        <---------DEAR3(1)--------->bZIP60(1)    <---------HSFB2a(1)                                      <---------LBD16<------NtERF2    --------->HSFB2a(1)                                   --------->GLK1(1)--------->LBD16 --------->ANAC58    <---------HSFC1(2)                                    <---------GLK1(1)<---------RAP2.3(1)    --------->HSFC1(2)   --------->ANAC58                 <---------ZAT2  <---------ANAC46 --------->ANAC58    --------->KAN4(1)    --------->ANAC58                 --------->ZAT2 <---------LBD16   --------->ANAC46    <---------KAN4(1)   --------->SPL7                    <---------At4g35610 <---------ATERF1(1)   <---------KAN4(2)<-------TEIL                          --------->At4g35610<---------DEAR3(1) ------->DOF2 ---------->DOF2 <----------DOF2       <-----------HVH21<---------ICU4 ------>NtERF2   gaaagaatgttcgccttgaagctgcatacggactttgatgaggtctaatgggtgagtcagagctccggcgatgattgcggcgatgccaccttcaagaaat  2950500                                  <------------CBF                                <---------AHL20(2)                                --------->AHL20(2)                             <---------ARR14(2)                             <---------ARR11(3)                                                     <                             --------->ARR14(2)                                                     <                            <------ZmHOX2a(1)                         ---------->DOF2              --                        --------->LBD16                   <------ZmHOX2a(1)                        <-                      <---------LBD16                   <---------TOE2(3)  ---------->DOF2         <-                     --------->MYB52(1)   <------ZmHOX2a(1)       <------------CBF                 --   ggtttgaagcccattgaaacgattaccggaggattttattgtaaggagagaatgttttgaggaatgggaattgaaagaaaagaagagtttgggagataat  2950600            <XXXXXXXXXXXXXXXXXXXXXMIR830*           <---------AHL20(1)           --------->AHL20(1)           --------->AHL20(2)           <---------AHL20(2)  <----------DOF2 ------>ZmHOX2a(2) ------ZmHOX2a(2) ---------RVE1(1) ------->ARR11(3) --------ARR11(3) --------AGP1              >>>>>>>>>TBF1 ------->AGP1   --------->ATHB12     <------------CBF       <----------ID1   ----------->GT1   agatcttttgtaataaaatgtttggagaagaagaaatgaaattgaacaagttggaatggaagaagacaaactacttgagaagaaaataatgcaacgagta  2950700                         --------->ANAC55(2)                         <---------ANAC55(2)                                                     <---                         <---------ANAC55(1)                                                    <----        <---------ZAT18  <---------ANAC58                                                       -----        --------->ZAT18  <---------ANAC58                                                       <----        --------->ZAT14  <---------ANAC46                                                       -----        <---------ZAT14 <---------LBD16             <---------ANAC46                           ------      --------------->AtSPL8                        <---------ANAC58                           <----- <---------ANAC46      <-----------GT1     ------------>CBF                                  -------- <---------YAB1   ------>ZmHOX2a(1) <----------DOF2 <---------ANAC58   <---------ALFIN1  ---------->DOF2   gttgtgtttgtgtactagtcctgaattacgggttccagcttttagcacaatgtttcttgttttgtcttgatgcacaccttggcattacagaaaaagaata  2950800                                    --------->MYB46(3)                                   >>>>>>>>>>>>>>>>>LFY ---------CBF                  <---------ATHB12 -----ICU4                  <---------WRKY12 ---->ATHB51                <---------WRKY38(1)                                             <-------- ----ATHB1        --------------->AGL15                                                    --------->ANAC58 ---->ATHB12      <---------------AGL15                                  <---------TOE2(3) --------->ANAC58 --->ICU4        ----------------->AGL1                       --------->YAB1      <---------ICU4 ---- ----YAB1   <---------KAN4(2)--------->WOX13(1) <---------ARR11(3)<---------AHL20(2)      ------->TEIL ->YAB1   <------ZmHOX2a(1)--------->WRKY18(1) <---------CCA1(2) --------->AHL20(2) <----------ID1   attgaagctagaggaataaaccaatattggtcaatgaaaccaatgttctatatctaacatctactcataaaatttgatgtttcattaagacgaacgtcat  2950900                                   --------->AHL20(1)                                   --------->ARR11(3)                                   <---------ARR11(3)                                  --------->CCA1(1)                                  --------->RVE1(1)                               <---------AHL20(2)    ----------->RAV1(1)       --------->AHL20(2)   --------->DEAR4(1)     --------->AHL20(2)                              <---------AHL20(2)   --------->At1g77200    <---------AHL20(2)                            <---------AHL20(2)   --------->DEAR3(1)   <----------DOF2                                <---------AHL20(1)   <---------ETT(1)  --------->ARR11(3)              <---------AHL20(2)--------->AHL20(1)       <----   --------->DREB2C(2)  --------->TOE2(3)     --------->ANAC55(2)     <---------AHL20(2)     --------  --------->DEAR3(2) <---------ARR11(3)       <---------ANAC55(2)   --------->AHL20(2)      --------- ---HVH21 ----------->HVH21   <---------AHL20(2) --------->ATHB12   <---------AHL20(2)      <-------- ----->ARR14(2)     <---------CCA1(2)  <-----------GT1       ----------->GT1  --------------->AtSPL8   atacaccgacaattgacacattatatctttaattaaatatcttacattacatgatttacttaagagttatatatatattttttgtaccacaagagatata  2951000  Previous    Next  AGI:  At5g09470.1    Description:  mitochondrial substrate carrier family protein. similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT4G24570.1); similar to unknown [Populus trichocarpa] (GB:ABK95542.1); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067) Range:  from: 2949242    to: 2950514    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g09480.1    Description:  hydroxyproline-rich glycoprotein family protein Range:  from: 2950915    to: 2951694    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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