Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <---------ANAC46                  <---------At4g35610           ---------->DOF2         <------NtERF2                                      <---------ICU4                       <---       <----------ID1                                      <---------YAB1                    <-------      --------->RAP2.6(3)----------->ARR10               <------ZmHOX2a(1)            ------>MYB83 ----->ANAC46     --------->At4g35610           ----------->GT1<-----------GT1        ------>MYB46(1) ----->RAV1(1)  <--------P                     ----------->GT1<---------YAB1         --------->WOX13(1) -->MYB46(3) <---------TOE2(3)    --------->LBD16    ---------->DOF2  <---------GLK1(1)<---------ATHB12   cagaacaagacggcaaaggttgctgagaagagactccgaaaacacatatgagttaaaaaggattattactcgatttctcttgttcaccaatctatctttt  2931800                       --------->DAG2                ---------->DOF2            <---------------AGL15                   <--------ATHB1               --------->ARR14(2)           <-----------------AGL3                   <---------AHL20(2)           <---------GLK1(2)           --------------->AGL15                    --------->AHL20(2)           <---------ARR14(2)           <---------------AGL15                    --------->ATHB51             <------------CBF           ----------------->AG                     <---------ICU4         --------->ZAT14           ----------------->AGL2                  <---------ATHB12        <---------ZAT14           <-----------------AG                    <---------ATHB51        --------->ZAT18           --------->TOE1(3)                ------->GAMYB                ------->MYC3           --------->TOE2(3)               --------->MYB46(3)            <-------MYC3           ----------------->AGL1         <---------At4g35610         <---------ANAC46 --------GT1--------------->AGL15  --------->LBD16 --------->ICU4     <---------bZIP60(2) ---DOF2   ----------------->AGL3<---------LBD16 --------->YAB1    ----------->HVH21   cacttatctaaaaccctaaaaaggaaaggttttgctccggtttcaacagactaataatttagtggttttgtgacatgtgtacagattgggatgaaaactt  2931900                    ---------->DOF2                ============================HOX2a_HOX2a                --------->TOE2(3)                ------>ZmHOX2a(2)                                     --------->ANAC55(2)               --------->At4g35610                                    <---------ANAC55(2)              <---------AGP1                                          <---------ANAC46              <---------ARR11(3)                                      --------->ANAC46          <---------ANAC55(2)                                        <---------TOE2(3)          --------->ANAC55(2)                               <------------MYB.PH3(1)          <---------ANAC58                                <-----------GT1                <---------ALFIN1          <---------ANAC58                     <----------DOF2   <----------DOF2       --------->ANAC46        <-----------GT1                   <---------At4g35610------->GAMYB     <---------YAB1        <---------AHL20(2)           ------>ZmHOX2a(1)    --------->MYB52(1)  ------------>CBF --------->ZAT6<---------At4g35610   <----------DOF2   --------->TOE2(3)     <-----------GT1  -------   ctacctctaattacttgatctgaaaagttttatggggtccttttagcttctttgttttcttaacggtcttttacgtaaattacaatttcccccaagtcca  2932000                                                                                              ------>ZmHOX2a(1)                    --------->ANAC46              ------------>CBF                         <---------            --------->AHL20(2)                    <---------ATHB12                         ----------         --------->TOE2(3)   <-----------------AGL3                                       <----------         --------->TOE1(3) --------->PCF2 <-------MYC3                           <---------ANAC46  --------->At5g28300     <---------PCF2  ------->MYC3    --------->HSFB2a(2) <---------MYB52(1)----- ----------->GT1   <---------LBD16  ----------->HVH21     <---------HSFB2a(2) <---------------------- ----->CBF------>ZmHOX2a(1)<---------TCP15(1) ------------>CBF     --------->MYB52(1)---------->ID1<-   atactgtaattccttaaattacacggagggacccataaatgacacgtttacaatcaatttctcgacaaataactgaattcgttgtttgtttttttcctct  2932100                  <---------ARR11(3)                  --------->ARR14(2)                  <-----------ARR10                  <---------ARR11(1)                  <---------ARR14(2)                  ------->TEIL                 <---------ARR14(1)                 <---------CCA1(2)             ------>NtERF2            --------->DEAR3(1)         <---------O2         --------->ANAC58         --------->O2 --GT1   --------->ANAC46                                                                      <----- >ID1<-----------HVH21                                                         <---------At4g35610 -- -GT1<-----------TGA1                                                          --------->At4g35610<-- ------------------>TaNAC69(2)                                                 --------->ZAT2  <----- --ANAC81--------->ANAC58  ------>ZmHOX2a(1)          --------->YAB1       ------->TEIL      -------- ----------TGA1 --------->LBD16              -------->ATHB1         --------->YAB1           <-------   tcgtcatcgtcacgcctccgtatcttctcctctgtttcatttttgaattattcgaatcaaaaatgtttgatcatatgaaactgctgcgatgcttcagctt  2932200                                                                   ------>ZmHOX2a(2)                                                                  <---------GLK1(1)                                                                  <------ZmHOX2a(2)                                                                  --------->GLK1(1)                                                                 <---------ARR11(3)                                 --------->ANAC58                --------->ARR11(3)                             --------->YAB1                      <---------ARR14(2)                             --------->ATHB12              --------->MYB46(3)    <------NtERF2           --------->ICU4            --------->HSFB2a(2)    --------->ATERF1(1)     <---------ATHB12          --------->ANAC55(2)   ------>NtERF2       --------->LBD16                <---------ANAC55(1)   <-----------HVH21   ------>NtERF2                  <---------ANAC58   <---------ATERF1(1)<---------ETT(1)                <---------ANAC55(2)  --------->DEAR3(1)  <---------LBD16  --------->ANAC46--------->LBD16     --------->ANAC58  <---------DEAR3(1) <---------LBD16   ------->GAMYB  <---------ANAC58     --------->ANAC58 ------HVH21         --------->RAP2.6(3)              <---------HSFB2a(2) <---------LBD16 ------->ANAC46   --------->KAN4(2)   --------->MYB46(3) --------->MYB52(1)--------->ANAC46 -------LBD16 ----------->GT1<---------ICU4   <---------WRKY12   <-----------ARR10 -----DOF2    <------MYB83--------->WOX13(1)  <---------WRKY38(1)<---------AGP1 ->At4g35610  <---------MYB46(3) --------->ANAC58     <---------ANAC46   <---------ALFIN1 --At4g35610  <------MYB46(1)-------->ATHB1   <---------ETT(2)   --------->ARR14(2)            ------   cacggcgtcgcgagattggttattccggcaatcattcgcaaacgccggtctacgttccgtaacgacagatctctcccacggcaattcaatcgcatcaaca  2932300                                                                       <---------ALFIN1                                                                       --------->DEAR3(1)                                                                      <------NtERF2                                                                      --------->ATERF1(1)                                                                     ------>NtERF2                                                                    --------->DEAR3(1)                                                                  <---------ORA47(2)                                                                  <---------ATERF1(1)                                                                 <---------DEAR3(1)                                                              --------->ARR14(2)                                                              <---------ARR14(2)                                                              <---------GLK1(2)                                                           --------->ANAC58                                                           --------->ANAC46                                                           --------->ANAC58                                                          <---------LBD16  ------->GAMYB                         --------->ANAC46           ------>ZmHOX2a(1)<---------ATERF1(1)                         --------->LBD16           <---------ALFIN1--------->RAP2.3(1)                        --------->LBD16          ------>ZmHOX2a(1)<---------RAP2.3(1)                       <---------LBD16    ------>MYB83  <---------REM1(2) --------->ANAC58       <---                    --------->ARR14(2)    ------>MYB46(1) --------->LBD16 --------->ANAC58       ----                 ------>ZmHOX2a(1)      <---------MYB59------>ZmHOX2a(1)------>NtERF2   <---------LBD16 --->MYB46(3)   --------->TOE2(3)       --------->TOE2(3)<---------ALFIN1 --------->ANAC46--------->LBD16   gctatgcattgttggattcctaaatccccgaatcgatctaaacctaatctcctcctcctccacggattcggcgccaacgcaatgtggcaatacggagaac  2932400                                                                                        --------->GLK1(2)                                                                                        <---------ARR11(1)                                                                                        --------->ARR14(2)                                                                                        <-----------ARR10                                                                                        <---------ARR14(2)                                                                                        ------->TEIL                                                   <---------LBD16                     <---------CCA1(2)                                             ------>ZmHOX2a(1)                         <---------GLK1(2)              <---------SPL7             ------>ZmHOX2a(2)                             <---------ARR14(1)              --------->ORA47(1)        --------->GLK1(1)                         ------>MYB83             --------->MYB46(3)         <---------GLK1(1)                         --------->MYB52(1)             --------->DEAR3(1)         <------ZmHOX2a(2)                         ------>MYB46(1)            <---------At4g35610        --------->ARR14(2)                    ------>MYB46(1)        <-----------HVH21              <-----------ARR10                     --------->MYB52(1)       <----------DOF2                 <---------ARR14(2)                    ------>MYB83--------->HSFB2a(1)     --------->ZAT2                  --------->LBD16                       <---------MYB59 ------ARR11(3)                     --------->HSFB2a(2)         <---------ALFIN1<---------MYB59 ----->ARR11(3)                     <---------HSFB2a(2)    <---------YAB1  --------->AtMYB61   atctccgagctttcaccggccgattcaacgtctacgttcccgatctcctcttcttcgggttatcatccacatcggaaccaaaccgaaccgaatctttcca  2932500                                                                                              -------                                                                                              -------                                                                                              <------NtERF2                                                                                              -------                                                                                <------MYB83 <-------                                                                                <------MYB46(1)<-----                                                                                <---------ANAC58                                                                                <---------ANAC46                                                                                <---------ANAC58-----                                                                               <---------MYB46(3)                                    <---------ZAT14                           <---------MYB55(1)<----                           <---------ZAT14                                   <---------MYB52(1)------                           <---------SPL7                                  --------->ATHB12 <--------                           --------->ZAT18<------ZmHOX2a(1)                <---------MYB46(3)<-------                         --------->At4g35610                              <-------TEIL      <--------              ----------->GT1 --------->ANAC46                          <---------ARR14(2)  <--------             <---------TOE2(3)--------->ANAC58                          --------->ARR14(2)  <--------         <---------At4g35610  --------->ANAC58                   <---------At5g28300       --------->At4g35610         --------->At4g35610 --------->SPL7             <------NtERF2 <---------MYB46(3)   <---------At4g35610 <---------DEAR3(1)      <---------At4g35610   ------->TEIL  --------->MYB52(2)--------->MYB55(2)<---   ggctcggtgtctgatgaggttaatggaagcgcacggagtccagaggatgaacatcgtcgggattagttacggtggattcgttgggtatagtttagcggcg  2932600     --------->LBD16    <---------ANAC46    --------->HSFB2a(2)    <---------HSFB2a(2)            <---------ANAC46   <---------LBD16                <---------LBD16 <---------ARR14(2)            --------->ZAT2 --------->ARR14(2)            <---------ZAT2 -->RRTF1(1)                   --------->At4g35610 -->RAP2.3(1)                  <---------At4g35610                                            <------ -->ATERF1(1)                 <-----------RAV1(1)                                             ------- --ORA47(2)                   ===================RAV                                       ------->TEIL ----ANAC46                   --------->ALFIN1                       <------ZmHOX2a(1)     <---------ARR11(1) ->NtERF2                   <---------ANAC46                  --------->CCA1(2)            --------->GLK1(2) -----ZAT18               --------->ZAT14                    --------->ARR11(1)            <---------ARR14(2) --->DEAR3(1)             <---------ZAT14                    <---------ARR14(2)           <---------ARR14(1) -RAP2.3(3)               <---------At4g35610                --------->ARR14(2)        <------NtERF2 --RAP2.3(1)         <---------ANAC58                        <---------ARR11(3)        -------------- -RAP2.3(2)          <---------ANAC58                        --------->ARR11(3)      --------->ALFIN1 -DEAR3(1)          <---------HSFC1(2)                <------ZmHOX2a(1)   <---------GLK1(2)--------->ARR14(2) -RRTF1(3)          --------->HSFC1(2)       --------->MYB52(2)     <---------SPL7<---------TOE1(3) ---NtERF2         --------->GLK1(2) <-----------RAV1(2)   ----------->ARR10      <---------TOE2(3)   cagtttccggagaacgttgagaagcttgtgctgtgctgcgcaggggtttgtttggaggagaaagatatggaggacggattgtttaaggtgccgaatctag  2932700  Previous    Next  AGI:  At5g09420.1    Description:  ATTOC64-V/MTOM64 (ARABIDOPSIS THALIANA TRANSLOCON AT THE OUTER MEMBRANE OF CHLOROPLASTS 64-V); amidase. similar to ATTOC64-III (ARABIDOPSIS THALIANA TRANSLOCON AT THE OUTER MEMBRANE OF CHLOROPLASTS 64-III), binding / carbon-nitrogen ligase, with glutamine as amido-N-donor [Arabidopsis thaliana] (TAIR:AT3G17970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62642.1); contains InterPro domain Amidase signature enzyme; (InterPro:IPR000120); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro domain Tetratricopeptide Range:  from: 2928317    to: 2931950    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g09430.1    Description:  hydrolase. similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT4G39955.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62638.1); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089); contains InterPro domain Alpha/beta hydrolase fold-1 (InterPro:IPR000073); contains InterPro domain Epoxide hydrolase-like; (InterPro:IPR000639) Range:  from: 2932163    to: 2933363    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version