Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        ----------->HVH21                                                         --------->ANAC58        ----------------->AGL1                           --------->ANAC58                          <-     --------->LBD16                                     --------->ANAC46                      <-----    <---------ANAC46                                     --------->ANAC55(1)                  <<<<<<<    <---------ANAC58                          --------->TOE2(3)    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <---------ANAC58                         <---------ICU4     ---------->DOF2               >>>>>>> ------ANAC58  ----------->GT1    --------->ANAC46  <---------WRKY38(1)                      <------- ------ANAC58  <----------ID1     --------->REM1(1) <---------WRKY45--------->ALFIN1      --------->MYB111(1)   cttgctccgtgcctaaaacgataaacatgtttctctacatcatataaacattagtcaacacgaaatcaaagtgtgacacaaacacaagagagtagttacc  2908300                                                                                --------->LBD16                                                                               ----------->GT1                                                                               --------->HSFB2a(2)                                                                               <---------HSFB2a(2)                                                                              <---------HSFB2a(2)                                                                              <---------LBD16                                                                              <---------ANAC46                                                                           <---------SPL7                                                                     <---------TOE1(3)                                                                    <-----------GT1                                                                <----------DOF2--------->LBD16   ----                                                             <------MYB46(1) <---------LBD16   <-----            <---------REM1(1)                                <------MYB83 <---------DEAR3(2) -------- --------ATHB12                                            <--------P<---------TOE2(3)       <------- ----YAB1<-----------RAV1(1)                            --------->ANAC46  <---------MYB46(3) -------- <<<<<<<<<<LFY                                          --------->ANAC58  <------MYB46(1)    -------- >>>>>>>>>>LFY       <---------AtLEC2 <---------TOE2(3) --------->ANAC58  <------MYB83 <-----------GT1 ----GT1 --------->ICU4              >>>>>>>>>WRKY18  <---------ALFIN1  <---------MYB52(1)  <--------   aatggagagtaatgttgtagtttgcattgttgatgacattgacgatgagcttatcaccacggtaggcttttaacgttggtccgggaaattctccgttcac  2908400    <---------ARR11(3)    <---------ARR14(2)    --------->ARR14(3)    <---------ARR14(3)           --------->ANAC58    --------->ARR11(3)           --------->ANAC58    --------->ARR14(2)          <---------ZAT18    <---------AHL20(1)          --------->ZAT18    --------->AHL20(1)        --------->REM1(2) ----->DEAR3(1)               <---------SPL7 ----At5g28300           <---------ANAC46 ->ZAT14                 <---------ANAC58               >>>>>>>>>GATA-1 --ZAT14                 <---------ANAC58  <----------DOF2                                          - ->WRKY12   <------MYB83<-----------------------TaNAC69(2)                                          - ->WRKY38(1)<------MYB46(1)<---------ANAC46<---------DAG2                                      ------ -MYB52(1)<--------P---------->DOF2 <----------DOF2   ----------->GT1                          ------   cgtcaatatcttgttggtattacaaagtcgtgtgtacgctttcgactttatctgtatagataaaaacgatggcatagtcagtttttttttaatccagtct  2908500                                               <---------MYB46(3)                                               ----------->GT1                                              --------->ALFIN1                                              <---------ANAC46             <---------AHL20(2)               <---------AtMYB61            <---------AHL20(2)       ---------->DOF2            --------->AHL20(2)   --------->TOE2(3) --------->ARR14(2)        --------->YAB1   <---------ANAC46 --------->ARR11(3)        <---------ICU4  --------->ALFIN1   <---------LBD16 <---------ARR11(3)       <---------ATHB12 <---------AtMYB61<---------SPL7 -------->RVE1(1) <---------------AtSPL8  <---------ZAT14 --------->At4g35610                -------- -------->CCA1(1) --------------->AtSPL8 --------->ALFIN1 <---------At4g35610          ---------->DOF2 --->TOE2(3)--------->AHL20(1) --------->ARR11(3)   <---------ARR14(2)      <---------------------WRI1 --->YAB1   <---------AHL20(1) <---------ARR11(3)   ------->TEIL--------->LBD16    <----------ID1   taatatcttcaaaataaaattttgtacaatcaataccttgaaagtgtggtggtgaatctcggcttccgcgatttggaatgcaagaagaacaaagagaaag  2908600                       --------->ATHB12                       <--------ATHB1                                                           <----                       -------->HAHB4                                                      ----------                       <---------ICU4                                                --------->YAB1                       --------->YAB1                                              --------->ANAC58                      <---------ATHB12                                             --------->ANAC58                      --------->ICU4                                         --------->ARR11(3) -----                      <---------YAB1                                       <---------AHL20(2)   -----   --------->ZAT14   <---------TOE2(3)                                    --------->AHL20(2)    <----   <---------ZAT14  --------->YAB1                         <---------MYB46(3)<---------ARR11(3)<----- -->DOF2  <---------ZAT14            --------->ICU4       <--------P     ----------->TBP<------ZmHOX2a(1)   aagactatagtctgtagagttttaatgattgtatttggaatgttgagcttgaactccatggttgttcttctcactataaaatctcaagcaggatgcaata  2908700                                                                                                  ---                                                                                                  ---                                                                                                <----                                                                                ----------->GT1 -----                                                                            --------->AHL20(1)  <----                                                                            <---------AHL20(1) ------                                                                        --------->YAB1         <-----                                                                        <---------ICU4         ------                                                          <---------GLK1(2) <---------AHL20(2) ====== -----AHL20(1)                                         --------->ANAC55(2) --------->AHL20(2)  <----- -->CBF                                                <---------ANAC55(2)<---------YAB1       ------ ---->AHL20(2)          <---------At4g35610       <---------ICU4        -------->HAHB4        <------ ---->AHL20(1)   <-----------RAV1(1) <------------CBF<-----------GT1   --------->ICU4     ---------->DOF2 -----AHL20(2)XXXXXXXXXXXXXXXXXXXX>MIR857      ----------->GT1<----------DOF2 <------------CBF------- ----ATHB12<-----------TBP       <-----------GT1 --------->ICU4        <---------ATHB12--------->YAB1   aattttagtttttttttatatgttgcagatgtttttttctattgtcaaatagttattacatattctttatcaaatgattatattgttaaaaataaagacc  2908800          --------->GLK1(1)    <------ZmHOX2a(1)  <---------TOE2(3) --->MYB46(1) --->MYB83<---------GLK1(1) -----MYB59 ---------->AGL15 -----------AGL15 ----------->AGL2 ------------AG                        --------->ANAC58 ----------->AGL1                      --------->ANAC58     <---------YAB1 =====================================================================MADS_MADS ------------AGL1              ------->MYC3                 <---------AHL20(2)       <---------ARR11(3) ----------->AG                <-------MYC3           --------------->AGL15          --------->AHL20(1) ---ARR11(3)                  --------->ANAC46     <-----------GT1   <---------ZAT14 --------->ARR11(3) -->ARR11(3)              <-----------GT1   ----------->GT1--------->AHL20(2) <------------CBF   taataaggaaggaaatctctgtaacgttttacacgttgagtaagaaatgtattataccatatataataggctacagtaggcattgaatatatcgaatgta  2908900                                                                  <---------At4g35610                                                          --------------->AGL15                                                          <---------------AGL15                                                         ----------------->AGL3                            <---------YAB1               --------->MYB46(3)                           <---------AHL20(1)            <---------ATHB12                           --------->ARR11(3)           ------>MYB46(1)                           <---------ARR11(3)           -------->P--------->At4g35610                          --------->CCA1(1)            ------>MYB46(1)                          --------->RVE1(1)          <---------MYB59                   ----------->GT1                   --------->MYB46(3)        --------->ANAC46               --------->DAG2                       --------->ANAC58           --------->ANAC58  <---              ---------->DOF2                       --------->ANAC58           --------->ANAC58  ----      --------->ANAC58  --------->YAB1  <-----------GT1------>MYB83         <---------ARR14(2)  -----      --------->ANAC58  --------->AHL20(2) ------->GAMYB------>MYB83        --------->ARR14(2)  -----   taacagggaagcacataaaagtggaataatatctttggaatttaaccgaatggaacccaaccatttttagatgactcggactcgccactaaatttgaatt  2909000                                                                                                   --                                                                                                   <-            <XXXXXXXXXXXXXXXXXXXXMIR826            --------->LBD16        <---------AHL20(2) --------    <-----------GT1                               <---------LBD16    --------->AHL20(2)      <------- ------AHL20(2)                          <-----------GT1        <---------MYB52(1)           <------- ----->AHL20(2)      --------->LBD16   <-----------GT1         --------->LBD16        --------->ANAC58 ---->AHL20(2)     <---------LBD16   <---------AHL20(2)       --------->ANAC46        --------->ANAC58 ---->YAB1  ------->TEIL      ----------->GT1     <-----------RAV1(2)<---------AHL20(2)  ---------->DOF2   aaaattttacaatgtatccaaaccggattatatggttattttttctccctctccagggtagtctccgctatttaaatttatgttcgacactcaaagattt  2909100                                   <---------ANAC58                    <---------ARR11(3)                    --------->ARR14(2)                    <---------ARR14(2)        <---------ICU4             <---------ANAC58      <---------TOE2(3)     <---------CCA1(1)                                                --------  <----------DOF2   <---------ARR11(1)                                                    --------->YAB1 ------>ZmHOX2a(2)  --------->ARR11(3)                                                   <-------TEIL ------->ARR11(3)   --------->GLK1(2)                                                  ------->MYC3 --------ARR11(3)  <---------CCA1(2)   <---------GLK1(2)                               <-------MYC3 ->ARR11(3)--------->AHL20(2)      <---------AtLEC2           <---------At5g28300 <-----------HVH21 --GLK1(2) <---------AHL20(2)    <-----------GT1             <-----------GT1     <---------ICU4 --ARR11(3)--------->YAB1   <---------RVE1(1)  <---------AtLEC2                 ------>ZmHOX2a(1) ---   tgatctttaagaattatatgcaaatcttggatattttgcctgattttcagcatggaacgatttttacagtttatgagcattcctcatcacatgcataaag  2909200  Previous    Next  AGI:  At5g09360.1    Description:  LAC14 (laccase 14); copper ion binding / oxidoreductase. Identical to Laccase-14 precursor (LAC14) [Arabidopsis Thaliana] (GB:Q9FY79;GB:Q1PDY2); similar to LAC12 (laccase 12), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G05390.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49683.1); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Cupredoxin (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); contains InterPro domain Multicopper oxidase, type 1; (InterPro:IPR001117); contains InterPro domain Multicopper ox Range:  from: 2906427    to: 2908659    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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