Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 ------>ZmHOX2a(2)                                                                             --------->ARR14(2)   ---                                                                             <---------ARR14(2)   ---                                           --------->ZAT18                   <---------ARR11(3)   <--              <---------YAB1             <---------At4g35610       ---------->DOF2               <---      <----------DOF2                    --------->At4g35610      --------->TOE1(2)  --------->HSFC1(2) <---------At4g35610                --------->GLK1(2)            --------->MYB46(3)  <---------HSFC1(2) --------->At4g35610               <---------GLK1(2)    <---------ATHB12     --------->ARR11(3)<-----   gccatctgcatttttgatgatcagtcttagaataagagattctagctcacagactcaaatcatccgaaccaaagaagtagatcgtgaagcttctctaccg  2905700                                                                          XXXXXXXXXXXXXXXXXXXX>MIR832-5P                                                                        ----------->GT1                                                                    --------->ARR14(2)                                    --------->TOE1(3)               <---------ARR14(2) ------>GLK1(2)                     --------->TOE2(3)               ---------->TaMYB80 ------>ARR14(2)            <---------YAB1                   <---------ARR14(2)                    <- -------ARR14(2)        --------->TOE2(3)                    --------->ARR14(2)           <---------ARR14(2) ------ARR14(1)       <---------ARR11(3)      ------>ZmHOX2a(1)  <---------ANAC46         --------->ARR14(2) ----MYB59        --------->YAB1  <---------ARR11(3)        <---------CCA1(2)   --------->YAB1  <----   aatccagaccaatttcaaaaacataatcttatactagaccttaatgtcctcgctaaaaacccaaatctcgtatatgctaaaatcaaaattcgaatccccc  2905800                                                                          ------>ZmHOX2a(1)                                                                 ------>MYB46(1)                                                                 ------>MYB83                               <-------TEIL                      -------->P                               ------->TEIL                     ----------->RAV1(1)                            --------->ANAC46                    --------->MYB52(1)     <---------WRKY38(1)                            --------->ANAC58                   --------->AtMYB61  ------>ZmHOX2a(1)                            --------->ANAC58               --------->DEAR3(1)    --------->TOE2(3) --------ATHB12      <---------ICU4                 ---------->DOF2   --------->ARR14(2)           <- -----ALFIN1     <---------ZAT14                 <-----------HVH21    <---------ARR14(2)       ------   aatcgagagaaattgggacttcacaattacacgtacatgagcttctccaaatgtcaaagcacagaccaacaggttcctcgtctccttagtcaacaaaaac  2905900                             --------->YAB1                         ----------->GT1                         --------->ANAC58    --------->ATHB12     --------->ANAC58   --------->ICU4   --------->LBD16                                                --------->ANAC58   <---------YAB1   --------->ANAC46           --------->YAB1                    ---------->DOF2 --------MYB52(1)  --------->LBD16   <---------LBD16                --------->ATHB12          ------- --->MYB52(1)     <---------LBD16    <-----------RAV1(2)           <---------ATHB12--------->ANAC58   cggtaatgactgaaaattttccccgagacgaaaataatctcagggagaagaataagagtttagaacccagtgattagcttcttcaaagcaaacccattat  2906000                                                                                <-------GAMYB                                                                             --------->LBD16                                                                            --------->ANAC46                                                                            --------->DEAR3(1)                                                                           --------->ATERF1(1)                                                                           <---------LBD16                                                                          <---------ATERF1(1)                                                                         <---------ARR14(2)                                                                         --------->ARR14(2)                                                                     --------->ATERF1(1)                                                                     <------NtERF2                                                                    ------>NtERF2  <-----------HVH21                                                                    <---------ATERF1(1)<------NtERF2                                                                    <-----------HVH21  --------->ATERF1(1)                     <----------DOF2                               --------->DEAR3(1)--------->ETT(1)                  --------->ANAC58                  <---------At4g35610 --------->ATERF1(1)         ---------->DOF2                    ----------->GT1     ------->GAMYB------>NtERF2    --------->ZAT6--------->ANAC58     --------->LBD16         --------->MYB46(3)<---------MYB52(1) -->ATHB51--------->DAG2             <---------LBD16--------->At4g35610<---------ATERF1(1)  <--------   tcgttgtcactaaaagttgcaagctttagaaatttcaaatgcggagttgaaaatagctgagttcaatcgccgtcgtctccgccgttgtcggaggcttttg  2906100                                                                                                   --                                                                                                  <--                                                                           <---------AHL20(2)    <---                                                                         <---------AHL20(2)--------->ATHB12                                                                     <---------AHL20(2)   --------->ICU4                                                                    <---------AHL20(2)    <---------YAB1                                                            <---------TOE2(3)           --------->YAB1                                     <-----------RAV1(1)   ---------->DOF2--------->AHL20(2)     ----                    ---------->DOF2 <---------YAB1        --------->AHL20(2)           --------->ICU4 --DOF2   ---------->DOF2 ----------->GT1      *TSS       <---------AHL20(2)           <---------ATHB12   atggcaattcaacaaagagagagaaaggaagtaaaactattgttggcagtatttttaaaattaaagtttttttattttaaatttgtcgaatgatgatggg  2906200        <---------At4g35610        --------->At4g35610      <---------ZAT14      --------->ZAT18    --------->TOE1(2)   --------->TGA1a   <---------ANAC58           ------->TEIL   <---------ANAC46      <---------ZAT2             <------MYB46(1)   <---------ANAC58      --------->ZAT2            <---------AtMYB61   <---------TGA1a       --------->At4g35610     <---------MYB52(1)   =============================================bZIP_DOF     --------->ANAC46 --------->MYB52(1)      <---------At4g35610   <---------ANAC58        --------->ATHB51 ---->ZmHOX2a(2)    --------->ANAC46           <---------ANAC58       <---------YAB1 ----ZmHOX2a(2)     --------->ANAC58           <---------ANAC46     --------->YAB1 ------ARR11(3)     --------->ANAC58    ------------>CBF <-----------GT1 ----->ARR11(3)     --------->AtLEC2 <----------DOF2<------MYB83   --------->AHL20(2) <---------O2   atctaacgtgcgctggaaaaccacgcaagctgaatctttctttgcaatttcgtttggtttttccctccatttattattgtctcgtttcacatggccattt  2906300                         <---------ARR11(3)                         --------->GLK1(2)                         <---------ARR14(3)                         <-----------ARR10                         --------->ARR11(3)                         --------->ARR14(3)                                                         <                  --------->ANAC46       --------->MYB52(1)                                   -------                --------->AtMYB61       --------->ICU4               ---------->DOF2     --------->ANAC46             <-----------GT1          <---------bZIP60(1)   <---------ANAC58           <---------ALFIN1         <---------AHL20(2)           --------->bZIP60(1)   <---------ANAC58          <---------ZAT14         --------->AHL20(2)           <---------TGA2(1) <----------DOF2               --------->ZAT14   gaattttgaatttaaataccacaccaaaatcttggtagtgacataatggacaactaaacttttcttgattccaaagcatttatgggactacacttcattc  2906400                                                    ----------->HVH21                                                  <---------ANAC58                                                  <---------ANAC58                                              <------ZmHOX2a(1)                                              --------->ATERF1(1)                                            --------->ALFIN1                                           <------ZmHOX2a(1)                       ==================                                        <-----------RAV1(2)                   <-------TEIL                     --------->ZAT6    ==============HOX2a_HOX2a           <------MYB46(1)               --------->YAB1          <------ZmHOX2a(2)           --------->ARR11(3)              ====================================HOX2a_HOX2a      <---------ARR11(3) --------->ZAT6             <---------ARR11(3)       --------->ARR11(3)         ----------->ARR10 <----------DOF2         ---------->DOF2              <---------ARR11(3)   --------->SPL7  <------MYB83 ---------ICU4<------ZmHOX2a(2)       <---------ARR14(2) <---------SPL7    <---------DEAR3(2) -->AtLEC2   --------->ARR11(3)     ----------->ARR10<---------WRKY18(1)  <---------DREB2C(2)  ------   aaaaatggcagaaaagatcataaacactaacaagaaggaagatcaggaggaggcttgaccatacgggaagatttagtcggtccatctttcactatgaaca  2906500                         <-----------------AGL3                  <---------ANAC58                  <---------ANAC46                  <---------ANAC58              <-------MYC3--------------->AGL15    --------->ANAC46              ------->MYC3<---------------AGL15    --------->ANAC58             <---------TGA1a                     <---------ALFIN1             <-----------RAV1(1)                 --------->ANAC46             =======================================MYC_MYB             =========================================MYC_MYB             --------->PIF3(3)                 <---------ALFIN1             =======================================MYC_MYB             --------->TGA1a                  --------->MYB46(3)             --------->O2----------------->AGL2--------->AtMYB61             <---------O2<-----------------AGL1------->GAMYB         --------------->AGL15              ------->GAMYB        ==================================MADS_MADS--------->ANAC58        <-----------------AGL1             --------->MYB46(3)        <-----------------AGL2             <---------MYB111(2)                         <---------ARR11(3)        <-----------------AG               <---------MYB55(2)                    --------->TOE2(3)        ----------------->AGL2             <---------MYB52(2)                   ------>ZmHOX2a(2)     --------->KAN4(2)   <-----------------AG-------->P   --------->YAB1      <---------ARR11(3) ======================bZIP_DOF            <---------MYB111(1)      <---------ATHB12   --------->ARR11(3) --->ZAT6<---------------AGL15        --------->AtLEC2 <----------DOF2      <---------YAB1       ----   ctgtgttcattccccatgtggcatgtctctctatatggcaatgcaacaaccacacccctttaataaacaaatcaaaccatgatcgtcaatatctcaaatt  2906600  Previous    Next  AGI:  At5g09350.1    Description:  phosphatidylinositol 4-kinase, putative. similar to phosphatidylinositol 4-kinase (PI4K) [Arabidopsis thaliana] (TAIR:AT5G64070.1); similar to hypothetical protein OsI_034285 [Oryza sativa (indica cultivar-group)] (GB:EAY80326.1); similar to putative phosphatidylinositol 4-kinase [Oryza sativa] (GB:AAF34418.1); similar to Phosphatidylinositol 4-kinase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA92023.2); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Phosphatidylinositol 3- and 4-kinase, catalytic; (InterPr Range:  from: 2899124    to: 2906147    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g09360.1    Description:  LAC14 (laccase 14); copper ion binding / oxidoreductase. Identical to Laccase-14 precursor (LAC14) [Arabidopsis Thaliana] (GB:Q9FY79;GB:Q1PDY2); similar to LAC12 (laccase 12), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G05390.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49683.1); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Cupredoxin (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); contains InterPro domain Multicopper oxidase, type 1; (InterPro:IPR001117); contains InterPro domain Multicopper ox Range:  from: 2906427    to: 2908659    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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