Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             ----------->RAV1(2)                                                                         <---------ALFIN1                                                                        ------>MYB83               --                                                                        ------>MYB46(1)            --                                       ----------------->AGL1         ------->GAMYB              ----                                 --------->ZAT18    --------->GLK1(2) --------->AtMYB61          ----                                 --------->ZAT14 <---------KAN4(2)   --------->MYB46(3)  ------->GAMYB                         --------->ANAC58      ----------->GT1  --------->AtMYB61       --------->MYB46(3) ---->DOF2   <------ZmHOX2a(1)   <---------ZAT14<------ZmHOX2a(1)  <---------ALFIN1   <-----------GT1 ------->ANAC81          --------->ANAC58----------->HVH21   --------->ANAC46 <---------ZAT2 <-------   agagagagaagtcgaggaattgaagacaagtcaagtccagtgcctgaagaggataatctgaaaacaccacaacctccccctgctcatataaccacagtca  2895000                                             <---------ANAC58                                             <---------ANAC58                                          <-----------RAV1(1)                                        ----------->RAV1(2)                                        <---------At4g35610      ---------->DOF2              ------->GAMYB                                            --------- ---------->DOF2              <------ZmHOX2a(2)                                        ---------->DOF2 ------->ANAC58              <---------ARR11(3)                                      --------------->AGL15 ------->ANAC58              --------->ARR11(3)        ---------->DOF2               <---------------AGL15 ----->ANAC58               --------->GLK1(1)<---------ANAC46 <---------At4g35610   ----------------- ----->ANAC58     <---------YAB1  --------->MYB46(3)--------->ANAC58                ----------------- ----HVH21    <---------GLK1(2)  --------->At4g35610--------->ANAC58            <---------MYB52(2)   caccaaagaaaagatggattcttcttgcagagatcaacagacatctggtgtgcaacgtaaagcctgctaatgagacattgaaacaaaccaaaagaagaaa  2895100                  -------->P                  ------>MYB83              XXXXXXXXXXXXXXXXXXXX>MIR841             ------>NtERF2            --------->DEAR3(1)            --------->MYB46(3)           --------->SPL7                                                                     =======         ----------->HVH21                                                       ----------->GT1         --------->ANAC46                                                       <---------TOE2(3)        --------->MYB46(3)                            --------->TOE2(3)         <---------------AtSPL8    --------->MYB46(3)       ------>MYB46(1)          --------->TOE1(3)         --------->DAG2<------ZmHOX2a(2) -->GT1 <---------MYB55(2)   ------>MYB83  --------->DAG2           ----------->GT1         --------- >AGL2-------->P  ------>MYB46(1)       >>>>>>>>>GATA-1            ----------->GT1  <-------TEIL >AGL3--------->MYB52(1)   <---------MYB59---------->DOF2        ------->TEIL   <---------TOE1(3)   aattgaactacccgacgaccaacttgaaaccaaactacaatagataaagtgaagaaccctaaaaatgaatcggaaaatcgataaggttcaaatcagatca  2895200                                                                              <---------TOE2(2)                                                                             <------NtERF2                                                                            <---------SPL7                                                                           <---------ANAC46                                        ------>ZmHOX2a(2)                  <---------ANAC58                                      <---------ARR14(2)                  ------>NtERF2                                      --------->ARR14(2)                  <------NtERF2                                --------->ZAT6                           --------->LBD16          <------ZmHOX2a(1) --------->TOE2(3)                   --------->ANAC46<------ZmHOX2a(1)          =====================================HOX2a_HOX2a    --------->ANAC46<---------TOE1(2)       <---------LBD16      --------->TOE2(2)               ------>MYB46(1)<---------ANAC58 ================HOX2a_HOX2a--------->TOE1(2)               ------>MYB83<---------DEAR3(1)         -- >At4g35610       ---------->DOF2     <---------AGP1   <-----------GT1 <---------LBD16            ---   aaacccatttcaggaattacaaaaggaaaacctaagactagatcggaacacagaaaatcaccatccacaacatcgcggcgtaggattagaaacagagaga  2895300                                                                  --------->ALFIN1                                                            --------->DAG2                                                    =======================HOX2a_HOX2a                                                   ========================HOX2a_HOX2a                                                   <------ZmHOX2a(2)          --------->LBD16                         <---------ARR14(2)         --------->ANAC46                         --------->ARR14(2)<------ZmHOX2a(1)        <---------LBD16                       =============HOX2a_HOX2a                             <-      --------->SPL7                          <------ZmHOX2a(1)--------->ALFIN1                    <-      --------->ARR14(2)                  ---------->DOF2 <---------ARR14(2)                       <-      <---------ARR14(2)           <---------DEAR3(2)     --------->ARR14(2)                       <-    <---------SPL7                 <---------MYB46(3)     ---------->DOF2                       -----   <---------ANAC58   <----------ID1   <------NtERF2<---------DEAR3(1)                        -------   <---------ANAC58   ----------->GT1 <---------MYB46(3) <------NtERF2                   <------ZmHOX2a(1)  --------------->AtSPL3          <---------DEAR3(1)------>ZmHOX2a(2)               --------->CCA1(2) ------->DAG2        ----------->GT1 --------->ALFIN1 <---------LBD16              <---------ARR11(3) ------->DOF2     <---------ARR14(2) <---------ANAC46 --------->At4g35610          --------->ARR11(3)   aaaagtcgtacccggagatggatagggaaaaactcgacggtggggaaaggacgatcggcggaaagggggaggagagcgagagagagatataggagagagt  2895400                                      <---------SPL7  >>>>>>>>>ARR1          --------->ANAC58      <------NtERF2         >>>>>>>>>ARR2      <------ZmHOX2a(1)         <---------At4g35610   >>>>>>>>>ARR1 --------->ALFIN1       <---------WRKY38(1)   <-----------TBP                --------->AHL20(2) ----------->HVH21      <---------WRKY12<---------TOE2(2)                <---------AHL20(2) --------ANAC55(1)     --------->WRKY18(1)----------->GT1 <---------ANAC58   <---------AHL20(2) --------ANAC58       <-----------HVH21 <---------TOE1(2) <---------ANAC46<---------AHL20(2) --------ANAC46       *TSS      --------->At4g35610   <------------CBF   --------->AHL20(2) --------ANAC58 <---------ARR14(2)   <---------MYB46(3)   <---------ANAC58--------->AHL20(2) ---->ALFIN1    --------->ARR14(2) <-----------HVH21  >>>>>>>>>ARR2     <---------AHL20(2) -->ALFIN1--------->ANAC58    <---------DEAR3(1)     <------ZmHOX2a(1) --------->YAB1         -------   ggcgtgaaggacgagccagaactgagtcaagggctgcggtcgtagggtttatataggattgtgtgagggtctatattaatttataaacccaaaaaaactt  2895500                                                                                            ---------                                                                                            <--------                                                                                           --------->AHL20(2)                                                                                           <---------AHL20(1)                                                                                        <---------AHL20(2)                                                                                        --------->AHL20(2)                       <---------YAB1                   <---------AHL20(2)              <---------AHL20(1)                      <-----------TBP                --------->YAB1                     --------->AHL20(1)     <---------TOE2(3)--------->AHL20(2)          <----------DOF2                    --------->YAB1     ------------>CBF<---------ICU4          ------>ZmHOX2a(1)      --------->YAB1  <---------YAB1    <-----------GT1 --------->ICU4          --------->TOE2(3)<----------ID1       --------->YAB1 <--- -->TOE2(3)       --------->YAB1        <----------DOF2 --------->AHL20(2) <----------DOF2 <---------AHL20(2)   aaaaattaacaatatacctataatttttatagaattagttctctttcctcaacttttataaattggacaaaaatagccttttactcataataaattattt  2895600                     ------>MYB83                     ------>MYB46(1)                    --------->MYB55(1)                   --------->MYB46(3)                   <---------MYB59                                            <---------AHL20(2)                   <---------MYB46(2)                                      <---------AHL20(2)                <-----------GT1                                            --------->AHL20(2)             <---------ICU4                                                --------->ARR11(3)             --------->ATHB51                                              <---------ARR11(3)             -------->ATHB1                                                --------->AHL20(1)            <---------AHL20(2)                                             <---------AHL20(1)            <---------YAB1                                                --------->AHL20(2)         --------->AHL20(2)                  <---------YAB1             --------->AHL20(2)         <---------AHL20(2)                  --------->AHL20(1)       --------->AHL20(2)         --------->AHL20(1)                  <---------AHL20(2)      --------->YAB1    --------->MYB52(1)        <---------AHL20(2)        --------->AHL20(2)                --------->AHL20(2)--------->AHL20(2)        --------->AHL20(2)   <---------AHL20(2)                 <---------AHL20(2)<---------AHL20(2)   --------->AHL20(2)--------->MYB52(1)     --------->AHL20(2)  --------->AHL20(2)--------->AHL20(2) >AHL20(2)  --------->ICU4 <----------DOF2  --------->YAB1   <---------AHL20(1)  <---------YAB1 -AHL20(2)  --------->AHL20(2)    <---------AHL20(2)         --------->AHL20(1)--------->YAB1 --------GT1--------->AHL20(1)   --------->AHL20(2)         --------->AHL20(2)<---------YAB1   aacaatataaaaaaattattaccaaacgtcttttatttaattcaaataatattgtttatcaaatatataaataaaaatatattataaattaactgataac  2895700                                    --------->AHL20(2)                                    <---------AHL20(2)                                   --------->AHL20(2)                                <---------AHL20(1)                                            <<<<<<<                                --------->AHL20(1)                                          ---------                                --------->AHL20(2)                                          <--------                                <---------AHL20(2)                                    --------->ARR11(3)                             --------->YAB1                                           <---------ARR11(3)                           --------->AHL20(2)                                         --------->AHL20(2)                        <---------AHL20(1)                                            <---------AHL20(1)                      <---------AHL20(1)           --------->TOE2(3)                  --------->AHL20(1)                     --------->AHL20(2)<---------YAB1  <-----------GT1                <---------AHL20(2)           --------->YAB1  <---------AHL20(2)      --------->YAB1                    --------->AHL20(2)          <---------YAB1--------->AHL20(1)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <---------AHL20(2)        --------->YAB1--------->AHL20(1)          ----------->GT1                <---------YAB1  <---   tagtatgttaacatgataacaaaatatatattaataaatttataaatatacaatgttaaactatattgtattgcgataagtttataaatatattatgtta  2895800                                           --------->AHL20(1)                                           <---------AHL20(2)                                           <---------AHL20(1)                                          <---------AHL20(2)                                          --------->AHL20(2)                                          --------->YAB1                                      --------->AHL20(2)                                    <<<<<<<<<MYB98                                  <---------YAB1                                  ----------->GT1                               <---------AHL20(2)                            --------->ARR11(3)                            <---------ARR11(3)                            --------->AHL20(1)                                      --------->YAB1                            <---------AHL20(2)                                  <---------AHL20(2) <<MYB98                    --------->AHL20(2)                            ----------->GT1 -->GT1                     <---------AHL20(1)                          <---------At5g28300 -YAB1                     --------->AHL20(2)                          <-----------GT1    <---------AHL20(2) --------GT1           <---------YAB1 <---------AHL20(2)         <---------YAB1--------->AHL20(2)   -   aactatattgtatcgcgataagtttataaatatattatgttaaattatattgtatcgcgataagtttataaatataccgtattaaatcatattatatcgc  2895900  Previous    Next  AGI:  At5g09330.1    Description:  ANAC082 (Arabidopsis NAC domain containing protein 82); transcription factor. similar to ANAC103 (Arabidopsis NAC domain containing protein 103), transcription factor [Arabidopsis thaliana] (TAIR:AT5G64060.1); similar to NAC1 [Medicago truncatula] (GB:AAF68626.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) Range:  from: 2892366    to: 2895422    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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