Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      <---------ARR14(2)                                                    --------->ARR14(2)                                             <----------DOF2                                            ===============================HOX2a_HOX2a     --------->YAB1                         ------>ZmHOX2a(2)     <---------ICU4                        <------ZmHOX2a(2)    <---------YAB1                         ================================HOX2a_HOX2a    <---------ATHB12                      <---------ARR14(2)    --------->ICU4                        <---------ARR14(3)  --------->YAB1                          --------->ARR14(3)                  ---------->DOF2 <---------YAB1                           <---------ARR11(3)             <---------ANAC46 ------->YAB1                             --------->ARR14(2)            <---------ZAT2 -->TOE1(1)                               --------->ARR11(3)            <---------At4g35610 -->TOE2(1)         <----------DOF2       <-----------ARR10         ------>ZmHOX2a(1) --LBD16           --------->TOE2(3)      <---------AGP1          ----------->RAV1(2)     <-------TEIL   attataatcattctttggaaacctttttgttatgggctcttgaagatctttgtgtattctcttcttactcctgcagcttgtaaagaaccaagttcatgga  2878500                              --------->HSFB2a(2)                              <---------HSFB2a(2)                        <---------MYB46(3)                      <---------ANAC58                      <---------ANAC58                           ---------->DOF2                      <-------GAMYB                         --------->TOE1(2)                     <------MYB83                  <---------WRKY18(1)                     <------MYB46(1)              --------->WRKY38(1)       --------->YAB1                     <---------MYB46(3)           --------->WRKY12        <---------WOX13(1)                    <---------AtMYB61             ----------->HVH21    <---------YAB1                    --------->MYB59         <---------GLK1(2)  <---------YAB1   gtctctctccttgtaaaatggtttggttgtttctaaaaccgattcagagtctttgacctgaacatatgaaagtatgaatgacaacatttaggctcagtgg  2878600                                   <----------DOF2                              <-----------GT1                          <---------GLK1(2)                          <---------ARR14(2)                            ---------->DOF2   <---------CCA1(1)                          --------->ARR11(3)                         --------->HSFC1(1)   <---------RVE1(1)                          --------->ARR14(2)                         --------->HSFB2a(2) <---------AHL20(1)                         <------ZmHOX2a(1)                           <---------HSFB2a(2) --------->ARR11(3)                <----------DOF2  ------>ZmHOX2a(1)            <---------GLK1(2)          --------->AHL20(1)                --------------->AGL15                   <----------ID1--------->LBD16---------->DOF2            <----------DOF2  <-----------GT1        ---------->DOF2  <---------HSFC1(1)  <---------ARR11(3)   gaacaattgtttctctttctttgtataggattttcctcttttctgagtgaaaatcaaagctacaaattcttccagaaagaattcactaaaagatatttgt  2878700                                                                                  --------->AHL20(2)                                                                                  <---------AHL20(1)                                                                                  --------->AHL20(1)                                                                                  <---------AHL20(2)                                                                            ----------->GT1                                                                         ------>MYB46(1)                                                                         --------->MYB52(1)                                                                         ------>MYB83                                         ----------->GT1               --------->AtMYB61                              --------->ARR11(3)           <---------WOX13(1)    --------->AHL20(2)<-                              <---------ARR11(3)      --------->TOE2(3)<---------MYB59      ---------       <-----------HVH21    --------->ICU4      --------->AHL20(2)  <-----------GT1        <---------AtMYB61   aaatgggaatgtcaaaccaattggtttgtcaagatttcaaaaccagaaaaaaaaattcttaattgatattaaaccaaaccgtattaaattggtatggttt  2878800                                         --------->ANAC58                                         --------->ANAC58                                    --------->ARR14(2)                                  ----------->GT1                        <--------ATHB1                                 --------->ANAC58                        --------->YAB1                                 --------->ANAC55(2)                    <---------ATHB12               ---------->DOF2   --------->ANAC58                       <---------ATHB51------>ZmHOX2a(2)          ------->GAMYB          <---------ANAC55(2)                ------------>CBF  <---------ARR14(2)         --------->MYB46(3)   <---------ARR14(2)                    <---------ATHB12  --------->ARR14(2)      --------->REM1(1)  --------->MYB52(1)                        ------>MYB46(1)    <---------AGP1 --------AHL20(2)        ------------>MYB.PH3(1)                   ------>MYB83      *TSS -->GT1  <---------MYB52(2)   --------->ARR14(2)               ------->TEIL<-----------GT1          -   tttaatctacaacaaaccaaagaaaaaaaaccgatacggaaacacgactatttagcaaaactatgcacctatcaataatacctcgctcgatctgggtttt  2878900                                                      --------->ATHB12                                                 <---------ARR11(3)                                                 <---------ARR14(2)                                                 --------->ARR14(2)                                                 --------->ARR11(3)                                                --------->GLK1(1)                                                <---------GLK1(1)                                        --------->ATHB12                                       <-------TEIL  <---------YAB1                                      <---------------AGL15                                      --------------->AGL15                                     <-----------------AGL3                                     <-----------------AG                           --------->LBD16     <----------DOF2                --------->At4g35610                <----------DOF2 --------->DOF2                     <---------At4g35610             ------>NtERF2  <-----------RAV1(2)   tgcaaagctttatagggtttaagaactatggctctctgagcttcatttggaaatcttcattgttcttcgacgactttgtttgactccaggtacctgtttt  2879000                                                                                <-------TEIL                                                                           ------>ZmHOX2a(1)                                                                           --------->HSFB2a(2)                                                                           <---------HSFB2a(2)                                                                       ==============================                                      <----------DOF2                  ------>ZmHOX2a(2)                             --------->ANAC58                         <------ZmHOX2a(2)             -                             --------->ANAC46                         --------->GLK1(1)             <                             --------->ANAC58                         <---------GLK1(1)            <-                        <------ZmHOX2a(2)                             ===============================                       <---------ARR11(3)                            <---------ARR11(3)            --                       --------->ARR11(3)                            --------->ARR14(2)           <--                       --------->ARR14(2)                            <---------ARR14(2)         <----                       <---------ARR14(2)                            --------->ARR11(3)--------->DAG2        --------->TOE2(3)------>ZmHOX2a(2)        <---------LBD16    <---------AGP1   ---------->DOF2   gtttttgtattcttagaacaaataagatcccaaggaatttctttttgtaatttctgggttttgtagccatagatctcctagatgcacagaaagtgtttga  2879100                                                           ----------------->AGL3                                                           <------NtERF2                                                          --------->LBD16                                                          ------>NtERF2                                                         --------->DEAR3(1)                                                         --------->RAP2.3(2)                                                         --------->RAP2.3(3)                                                         --------->RAP2.6(2)                                                         --------->RRTF1(2)                                                         --------->ATERF1(2)                                                         --------->DREB2C(2)                                                         <---------ATERF1(2)                                                         --------->ANAC46                                                         --------->RRTF1(3)                                                        --------->ERF1                                                       <---------ATERF1(1)           ---------->DOF2      <---------At4g35610                           ===============================HOX2a_HOX2a ====HOX2a_HOX2a                                    ------>ZmHOX2a(2)         <---------GLK1(1) -------->GLK1(1)                                  <------ZmHOX2a(2)         --------->ARR14(2) ---------GLK1(1)                                 <---------ARR11(3)         <---------ARR14(2) --------ARR14(2)       <-----------GT1           --------->ARR11(3)     --------->HSFB2a(2) ====HOX2a_HOX2a      <---------AHL20(2)          <---------AGP1         <---------HSFB2a(2)        < ------->ARR14(2)<-------TEIL                 --------------------->WRI1<---------ANAC46  <----------DOF2 ----ZmHOX2a(1) <--------P             <-------TEIL================================HOX2a_HOX2a      < -----TOE2(3) ----------->GT1         <---------MYB52(1)--------->RAP2.3(1) <------ZmHOX2a(1)      --   ggaaatgcctctgagaaggttgatttaaactctattgcccgttcatttcatagatctcgccgccaattttagtttcgaggatttgtgcaaagcttttaga  2879200                                                                 <---------DAG2                                                                 <----------DOF2                                                                 <---------ANAC58                                                                 <---------ANAC58                                                                --------------->AtSPL3                                                      --------->ARR14(2)                                                  ------>ZmHOX2a(2)             <-------GAMYB                       <------ZmHOX2a(2)            <---------MYB46(3)     ======================HOX2a_HOX2a           <---------AtMYB61       ------>ZmHOX2a(1)  <---------ARR14(2)        <----------DOF2  ================================HOX2a_HOX2a    <-----------------AGL1         =====================HOX2a_HOX2a  ---------->ID1         ===============================HOX2a_HOX2a                                -- ---------ANAC58         ------>ZmHOX2a(1)      <---------ARR14(2)   <---------YAB1             <---- ---------ANAC58        --------->TOE2(3)       --------->ARR14(2)<---------SPL7           ---------- ------------->AtSPL8<-----------GT1         --------->ALFIN1  <---------ZAT18            <---------YAB1   tttcgtccctcttttggttgtattttcctcaaaaatcctatgcaaatgtggatccagtttcgcagtgccttacgattttagatttcaatagtatggttat  2879300                                            <---------DAG2                                     <---------TOE2(3)                                 <----------DOF2                              --------->ARR11(3)             ------>ZmHOX2a(2)   <-------TEIL               <---------ARR11(3)           <---------ARR11(3) ----->TEIL                --------->AHL20(2)     --------->TOE2(3) -----YAB1               <----------DOF2    <----------DOF2--------->ARR11(3)         <-------TEIL ->GT1        <-----------GT1<---------CCA1(2)  <-----------GT1          <-----------GT1          <--   gaacattcatggaatttttcaacttccctttaaatcttttagattacttttttcttaatatgatcttagtttgtttcacttcatgaggtccatatagatt  2879400  Previous    Next  AGI:  At5g09260.1    Description:  VPS20.2. similar to VPS20.1 [Arabidopsis thaliana] (TAIR:AT5G63880.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81116.1); contains InterPro domain Snf7; (InterPro:IPR005024) Range:  from: 2876754    to: 2878701    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g09270.1    Description:  similar to hypothetical protein OsI_004420 [Oryza sativa (indica cultivar-group)] (GB:EAY76573.1) Range:  from: 2878885    to: 2880221    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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