Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   --------->ALFIN1 -------MYC2 -------PIF5 ------>PIF5 -------MYC3 ------>MYC2 ------>MYC3 ------->TGA1a ------->ALFIN1 --------TGA1a -----NtERF2 --------ANAC46 --------ANAC58 --------ANAC58 --->NtERF2 ------ANAC46 ---->ATERF1(1) --NtERF2 >NtERF2   <---------GLK1(2) ----ORA47(2) ----RAP2.3(1) ----DEAR4(2) ----ATERF1(1) -->ANAC46 --------->ARR14(2)                           <---------HSFC1(1) ---ATERF1(2)      ----------->RAV1(2)                  --------->HSFC1(1) -->ATERF1(2)      <---------At4g35610                  <---------HSFB2a(2)  --------->At5g28300 ---DEAR3(1)       --------->At4g35610         <---------DAG2        <-----------GT1 -->DEAR3(1)   <-----------TGA1           <----------DOF2     <---------ARR11(3)     --------->At4g35610 ---RAP2.3(2)  <-----------HVH21 <---------ARR11(3)     --------->HSFB2a(2) ----------->GT1 ---RAP2.3(3)<-------TEIL        --------->ARR11(3)   ------>ZmHOX2a(1) >>>>>>>>>>AtWER --LBD16   <---------ARR14(2)----------->HVH21 <----------DOF2--------->ARR11(3)     <---------At4g35610   cgcgtgggtttcagattcgtcatctgatgctctgacatcttcgtctttcctttttcctctagaagacattttctccaactgtaaataagcagacccaaaa  2876400                                                                                       <---------bZIP60(2)                          --------->ANAC58        --------------->AGL15             ----------->TGA1                          --------->ANAC58        <---------------AGL15             ----------->HVH21                      --------->ANAC58         --------->YAB1                     <---------ANAC58                      --------->ANAC58   --------->ANAC58                 <---------GLK1(1)                 --------->ZAT14         --------->ANAC58     --------->DAG2      <---------ANAC58                 <---------ZAT14    --------->MYB52(1)       ---------->DOF2----------->RAV1(2)   tgttctcttcagaccagagtaaactcgcactaaacaaaaaaccgagcaattacaaaatttagtaaaagtgagaaggaaacctggtcgtgacgctgcaacg  2876500                                                                                              <------               ---------->DOF2                                                                <------            <------NtERF2                                                            <-----------ARR10          <---------DEAR3(1)                                                        <---------CCA1(2)         --------->ATERF1(1)                                                      <------NtERF2        <---------ATERF1(1)                                                      ------>NtERF2-------       ----------->HVH21                                                     <---------DEAR3(1)   --------->HSFB2a(2)                                                     ------->TEIL       <------   <---------LBD16 <------ZmHOX2a(1)       ---------->DOF2 --------->GLK1(2)*TSS --------->ABI4(2)   <---------HSFB2a(2)                <----------ID1      <---------GLK1(2)--------->ARR14(2) <------   agtttctcggagacggcgaaaggactcttctactgcgaaatcgacaaaagagaattgagagattctgaagaaaaatgaatcggcgcgtctcttctcgcgt  2876600                             <-------GAMYB                        <-------MYC3                        ------->PIF5                        ------->MYC2                        <-------PIF5                        ------->MYC3                        <-------MYC2                       --------->ANAC58                       --------->ANAC58                       --------->ANAC46                   ------>MYB83                   ------>MYB46(1)                 <---------MYB55(2)   --------->TOE2(3) <---------ALFIN1   --------->YAB1--------->MYB46(3)  <---------YAB1 <---------MYB46(2) <---------TOE2(3)--------->ORA47(1)          --------->AHL20(2)           <---------LBD16     ------ ---ANAC46       --------->DREB2C(2)       ----------->GT1             <---------YAB1  <-----------TBP ---ANAC55(2)    --------->DEAR4(1)   <---------ANAC58          <-------GAMYB       <---------DAG2 -->ANAC55(2)    --------->DEAR3(1)   <---------ANAC46      ------------>AtMYB77 --------->ANAC58   - ---ANAC58      --------->DEAR3(2)    <---------ANAC58     ----------->HVH21     --------->ANAC58   < ---ANAC58   <---------ZAT14<-----------RAV1(1)<---------AHL20(2)<---------MYB52(1) <----------DOF2 -   atttatgttaatgtgttcaccgaccacgcgctgttgcagagcgtgtgataaaattagaactgtgacagttgttttgattcggaacgcttttttataaacg  2876700              --------->LBD16             <---------LBD16            --------->TOE1(2)         ---------->DOF2         ---------->DOF2      *TSS        <---------ARR14(2) <---------ANAC58         --------->CCA1(2)        --------->ARR14(2) <---------ANAC46        --------->ARR11(1)             ----------->HVH21 --->ANAC46 <---------LBD16<---------ANAC58        <---------ARR14(2)        ------->TEIL -------->GLK1(2)   <----------DOF2 ----------->GT1--------->ARR14(2)       <---------ALFIN1 ---------ARR14(2)  <---------DAG2 --------->DAG2  --------->ARR11(3)      <---------SPL7 -------->ARR14(2)<---------At4g35610          ---------->DOF2            --------->DEAR3(1)   cgaatttgagaaaacgcgggagcttttttgcttgggaaaggtgaaaacaaaaagatttggacttggtttgaaatcgccgaacccttgacaaaactcgatg  2876800                                       ------>ZmHOX2a(2)                      <------MYB83                                   <-------TEIL                               <------MYB46(1)     <--                                 <-------GAMYB                            <---------ZAT2         ----                                <---------MYB46(3)                        --------->ZAT2         <---                               <---------TOE2(2)                         --------->ANAC58       <----                --------->MYB52(1)<--------P                             --------->ANAC58    <-------    <---------AHL20(2)     <---------LBD16                             <------NtERF2       ----------   <---------AHL20(1)     --------->MYB52(1)                      --------->DAG2         --------->At4g35610   <---------AHL20(2)    <------ZmHOX2a(2)                       ---------->DOF2        --------->ANAC46   --------->AHL20(2)   <---------ARR11(3)    --------->GLK1(2) --------->MYB52(1)   <---------ARR11(3)   --------->AHL20(1)   --------->ARR11(3)   <---------GLK1(2)  ---------->DOF2 --------->WRKY18(1)   gggaatttattcgtgaagaaaccgaagatcacggaggttgatcgagcgattctctctctcaaaacccaaaggcgcaagcttggtcaatatcagcaacagg  2876900 -----TEIL                                             <------MYB46(1)  <---------ZAT18 ----->ARR14(2)                                        <------MYB83 --------->DAG2 ------ARR14(2)                         <---------YAB1--------->MYB59   --------->ZAT18 -----GLK1(2)                          --------->KAN4(2)           ---------->DOF2 ----RAV1(2)               --------->GLK1(1)       --------->ARR14(2)   --------->ZAT14             < ->RAV1(1)       <---------YAB1   ----------->GT1  <---------ARR14(2)   <---------ZAT14     ---------   ttcttgattccttcgccttgtgatttcgcatttctagggtttattcttgctcgaatttggtctgagacagaaagtgcagtttgattcgattcactaatgg  2877000                                                                                               ------                                                                                              <------ZmHOX2a(2)                                                                                        <---------ANAC58                                                                                        <---------ANAC58                                                                                        <---------ANAC46                                                                                  <---------ARR14(2)             <---------TOE1(3)                                                    --------->ARR14(2)             <---------TOE2(3)          <---------HSFB2a(2)                       --------->GLK1(2)     --------->MYB52(1)    <---------RAP2.6(2)                                   <---------GLK1(2) ---------YAB1     --------->ANAC55(2)  --------->HSFB2a(2)               <---------ANAC58   -------- >MYB52(1) ---------->DOF2--------->RAP2.6(3)           ----------->GT1   <---------ANAC58   <-------   ttatgaataagggtaaaggttactgaatttcggctatgggttctcgaggtttaagaagcagttaaatgtagaagttgccttcagaatctgtcttggatcc  2877100                                   --------->ATHB51                                   <---------ICU4                                   --------->AHL20(2)                               --------->AHL20(2)                               <---------AHL20(2)                           ----------->GT1                        <---------ICU4                        -------->HAHB4                        --------->YAB1        --------------->AGL15                       --------->ICU4         <---------------AGL15                       <---------YAB1        <-----------------AG               --------->DAG2   <---------YAB1      <---------ATHB12      ----------------->AGL1            ---------->DOF2 >ZmHOX2a(2)          <---------TOE2(3)    --------->ANAC46              --------->At4g35610 ->ARR14(2)      --------->ANAC58  <---------AHL20(2)  <--------P        <---------At4g35610 --ARR14(2)      --------->ANAC58 --------->ICU4 --------->ATHB12       ------>ZmHOX2a(2)   aaatgttgattcttatgtcaagctaatgatggtttaattatttcatcgccactattggtagatagtgagtttgatcgctgagaaagtggaatgcaaatgt  2877200                           --------->WRKY45                           --------->WRKY38(1)                           --------->WRKY12                           ----------->HVH21                                              <---------At4g35610                  ----------->RAV1(2)                                                     <---------ZAT2                  ------>ZmHOX2a(2)                                                       --------->ZAT2                --------->ARR11(3)                                                       --------->ANAC58                <---------ARR11(3)                                                       --------->ANAC58               --------->YAB1                                                        --------->ANAC58              <---------ATHB12                                                       --------->ANAC58             <---------TOE1(2)                                                      --------->DAG2            ------>ZmHOX2a(1)   <----------DOF2                   ---------->DOF2  ---------->DOF2            =============HOX2a_HOX2a<----------DOF2         <---------ANAC58  <---------At4g35610       <----------DOF2   <----------DOF2                    <---------ANAC58  --------->At4g35610    <-----------GT1 ------>ZmHOX2a(1)                <----------DOF2       ---------->DOF2--------->At4g35610   tttttttttctttcctatgatcctgagctttgacctttctttctcttaaacctttctttttagcttgagaaagtaattgaagcagaaaagcaagctgcaa  2877300  Previous    Next  AGI:  At5g09250.1    Description:  KIWI; DNA binding / transcription coactivator. Identical to RNA polymerase II transcriptional coactivator KIWI (KIWI) [Arabidopsis Thaliana] (GB:O65154); similar to transcriptional coactivator p15 (PC4) family protein [Arabidopsis thaliana] (TAIR:AT5G09240.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79502.1); contains InterPro domain Transcriptional coactivator p15; (InterPro:IPR003173); contains InterPro domain ssDNA-binding transcriptional regulator; (InterPro:IPR009044) Range:  from: 2875233    to: 2876576    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g09260.1    Description:  VPS20.2. similar to VPS20.1 [Arabidopsis thaliana] (TAIR:AT5G63880.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81116.1); contains InterPro domain Snf7; (InterPro:IPR005024) Range:  from: 2876754    to: 2878701    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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