Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   ----------->GT1                                 <---------At5g28300 ---->CCA1(2)                 --------------->AGL15                                   <---------ARR14(2) --->ARR11(3)                 <---------------AGL15                                   <-----------ARR10 ----ARR14(2)            <---------ANAC46  ----------->GT1           --------->MYB52(1)   ------>ZmHOX2a(1) --->ARR11(1)            <---------ANAC58 --------->DAG2     ---------->DOF2    --------->ANAC58 --->ARR14(2)            <---------ANAC58---------->DOF2 ----------->HVH21      --------->ANAC58 ----ARR11(3)      <---------At5g28300----------->GT1   ------>ZmHOX2a(1)      --------->WOX13(1) --->ARR10        <-----------GT1--------->YAB1 <-----------GT1     ----------->HVH21 --------->ARR14(2)   atgtagttaaaaacaaaaatttaccttgcttgctattacaaggtaaagttataccgtccttgacaaagaactgacgaatggcaatccaaatcctcccatt  2874500         ---------->DOF2       --------->MYB52(1)     ------>ZmHOX2a(1)       <---------MYB59              --------->YAB1                --------->TOE1(3) <---------ARR14(2)   --------->GLK1(2)           --------->YAB1                  ------>ZmHOX2a(2) --------->ARR14(2)  <---------GLK1(2) ----------->GT1   <---------YAB1<-----------GT1  --------->TOE2(3)   gcaattcctcacaaagactctccgattcttatctaactggaatgtaaacaaaacataacatcataaacaaatatcacaacttgatccaaaccctaaaact  2874600                                                                                   <----------DOF2  <                                                                                   ==================                                                                                  <---------ANAC58  <                                                                                ------>NtERF2       <                                                                              <---------MYB52(1)    <                                                                             --------->At4g35610    <                                                                           --------->SPL7           <                                                           --------->ARR11(3)<---------At4g35610    <                                                    --------->At4g35610  <---------SPL7    ==========                                                    <---------At4g35610  <-----------HVH21 <---------DAG2                        --------->CCA1(2)   <---------YAB1 <---------ARR11(3)<------NtERF2 <---------                   ---------->DOF2          <---------TOE2(3)    ------>ZmHOX2a(1)<---------ANAC58  <   catacgaactgctacagacaaaaaagagatgaatagtagagagactaacattgcagatgaagatgtcctcaatctcgtccgctggctttgccactttctt  2874700          <---------PCF2       --------->ALFIN1      ------->PIF5      <-------MYC3      <-------PIF5      ------->MYC2      <-------MYC2     <---------TGA1a     <---------ANAC46     <------NtERF2     <---------ANAC58     --------->ALFIN1     --------->TGA1a     <---------ANAC58    ------>NtERF2   <---------ANAC46  <------NtERF2  --------->ARR14(2)  --------->ATERF1(1) <---------ORA47(2) <---------RRTF1(1) <---------RAP2.6(1) ------>NtERF2   <---------GLK1(2) <---------ATERF1(1) <---------DEAR4(2) <---------RAP2.3(1) <---------ERF1  <---------ARR14(2) ---------RRTF1(2) ==============bZIP_DOF ---------RAP2.3(3) ---------DREB2C(2) ---------RRTF1(3)                                               <---------ANAC58 ---------RAP2.6(2)               <---------At4g35610            <---------ANAC58 ---------ATERF1(2)            ----------->RAV1(2)             <-----------GT1 ---------RAP2.3(2)        <-----------HVH21               <---------DAG2 ==============bZIP_DOF  <------NtERF2           ------>ZmHOX2a(1) <---------MYB52(1) -DOF2------->MYC3   <-----------HVH21   ----------->HVH21 <----------DOF2             --------->TOE2(3) ---------DEAR3(1) <-------TEIL<---------At4g35610    <----------DOF2            --------->TOE2(3)   aggcggcgcgtgggtctcagattcgtcgcggtcgtctgatgctctgacatcctcgtctttcctttttccgttctcagacattttcttaacctctaaaaaa  2874800                                                                                            ---------                                                                                      <---------ANAC58                                                                                      <---------ANAC46                                                                              --------->ARR11(3)                                                                              <---------ARR11(3)                                                                            <---------AHL20(2)                                                                            --------->AHL20(1)                                                                            --------->ARR11(3)                                                  *TSS<---------ALFIN1      <---------ARR11(3)                                            --------->AHL20(2)              <---------AHL20(1)                                        --------->AHL20(2)            <---------ANAC46<---------ANAC58                                     ----------->GT1------->TEIL      --------->ANAC55(2)--------->WRKY38(1)                --------->DAG2 --------->GLK1(2)--------->DAG2        <---------ANAC55(2)--------->WRKY12               --------->ICU4 <---------GLK1(2)---------->DOF2<----------DOF2<---------CCA1(2)   aacactcttctactgcaaaaattgactcttgagattctcaagttaaataaaaagcacctctctccttttctcgcgtaatatatctactgcgttcaccgaa  2874900                       --------->ANAC46                       --------->ANAC58                           --------->TOE2(3)                       --------->ANAC58                     ------>NtERF2                      --------->SPL7                        <------NtERF2                 <-------TEIL                              --------->DEAR3(1)                --------->ARR14(1)                         --------->RAP2.3(2)                --------->GLK1(2)                        <---------ATERF1(1)               <---------GLK1(2)                        --------->ANAC46               --------->ARR11(1)                      <-------MYC3               --------->ARR14(2)                      ------->MYC3               <---------ARR14(2)     --------->ZAT14  <-------MYC2         --------->GLK1(1)            <---------ZAT14  ------->MYC2  ---------->DOF2             ----         <---------GLK1(1)            <---------ZAT18 --------->ANAC58                      <------MYB83         --------->bZIP60(1)          --------->ZAT18 --------->ANAC58                      --------- >ANAC46 <---------bZIP60(1)   <-----------GT1        --------->ANAC46    <---------LBD16   <------MYB46(1)   ttacaactgtgatatcagattcggaacgccattttacaagcgcacagtttgagaacacgcgcggccaaacttaaaacgggggagttttttgggaaggtaa  2875000                                       <---------ALFIN1                                     ----------->RAV1(1)            <-------TEIL         --------->At4g35610                             ---------->DOF2                     XXXXXXXXXXXXXXXXXXXX>MIR861-3P ----->ICU4                 --------->YAB1                  <---------YAB1  ---------->DOF2 -->GT1  ---------->DOF2   <---------ATHB12       <-------TEIL <---------ANAC46          <---------At4g35610   atattctttggaaaagagcaactatagcaatgaaagtagcaacacagagtgatacatttattgtgatgggttcatcttcaaagacaatgtctgcttatgg  2875100                                                                                                -----                                                                                                -----                                                                                              -------                                                                                              <------           <---------ANAC55(2)                                                                -------        <------ZmHOX2a(2)                                  <-----------GT1                    <------     --------->LBD16                            ------>MYB46(1)                              <-------   <---------LBD16                              ------>MYB83                                 <------- <---------WRKY18(1)       <---------ARR11(3) <---------MYB59         <---------ATHB12------>ZmHOX2a(1)   ccttgtccggatcaagtgaagtttggcaagagctatgtaacatttagacctatcttgtttataacttatcaaatgaatacttgtattcctgcaacgtatc  2875200                                                                 --------->AtMYB61                                                                <---------MYB55(2)                                                                --------->MYB46(3)                                                <---------AHL20(1)                                                <---------AHL20(2)    <---------ANAC58                                                --------->AHL20(1)---------->DOF2                                               --------->AHL20(2)------->GAMYB                                            <--------HAHB4     -------->P                           --------->At5g28300<---------YAB1   ------>MYB83 ---->TOE2(3)             ----------->GT1   <---------ICU4     ------>MYB46(1) ---->YAB1              <---------At4g35610 --------->YAB1    --------->MYB55(1) >TEIL                  --------->At4g35610 -------->ATHB1   <---------MYB111(1) ---ARR11(1)         --------->ZAT14       --------->ICU4    <---------MYB111(2)              ------- -->ARR14(2)         ---------->DOF2       <---------ATHB12  <---------MYB46(2)             <-------- ---ARR14(2)         <---------ZAT14     --------->WOX13(1)  --------->MYB46(3)     --------->DAG2 --ARR14(1)     --------->ZAT18   ---------->DOF2         <-----------GT1          ---------->DOF2 --CCA1(2)--------->AHL20(2)     --------->AHL20(2)  --------->TOE2(3)<---------ANAC58      ---------   ttaatttgcaaataaaacagcactacagcagtaaataaaagagcaatcattatattcttaataccaaccaaagcttgtctgaaccaaaagtgaaagattc  2875300                                                                                                    <                                                                   --------->MYB52(1)          ------                                                             ------->GAMYB                     ------                                                             --------->AtMYB61                 ------      ------>MYB46(1)                                       --------->MYB46(3)              <-------TEIL      ------>MYB83       --------->ZAT6                    --------->ANAC58                 --------- --------->ANAC46   <---------At4g35610                    --------->ANAC58             ------------- -->GLK1(2)         --------->At4g35610                  --------->MYB46(3)             ------------- -HSFB2a(1)         --------->ZAT2               --------->HSFB2a(2)              <---------YAB1----- >HSFB2a(1)      <---------At4g35610             <---------HSFB2a(2)----------->RAV1(2) <------------   catacaccaactaatttgaagcagcttacactagcagaacatggtgttgttctacaaaaacaaccaaaacaactgagccatattctaatagacgtacaac  2875400  Previous    Next  AGI:  At5g09240.1    Description:  transcriptional coactivator p15 (PC4) family protein. similar to KIWI, DNA binding / transcription coactivator [Arabidopsis thaliana] (TAIR:AT5G09250.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79502.1); contains InterPro domain Transcriptional coactivator p15; (InterPro:IPR003173); contains InterPro domain ssDNA-binding transcriptional regulator; (InterPro:IPR009044) Range:  from: 2873696    to: 2874850    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g09250.1    Description:  KIWI; DNA binding / transcription coactivator. Identical to RNA polymerase II transcriptional coactivator KIWI (KIWI) [Arabidopsis Thaliana] (GB:O65154); similar to transcriptional coactivator p15 (PC4) family protein [Arabidopsis thaliana] (TAIR:AT5G09240.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79502.1); contains InterPro domain Transcriptional coactivator p15; (InterPro:IPR003173); contains InterPro domain ssDNA-binding transcriptional regulator; (InterPro:IPR009044) Range:  from: 2875233    to: 2876576    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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