Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  ----------->RAV1(1)                                               --------->MYB46(3)                                               --------->REM1(1)                                             ----------->RAV1(1)                                          <------MYB83                                         ------                                          <------MYB46(1)                                 --------->ZAT2          <---------GLK1(2)             <--------P --------->YAB1                     ------>MYB83        <---------ATHB12               <---------ANAC58                               ------>MYB46(1)    <---------MYB55(2)                 <---------ANAC58                               -------->P   --    --------->MYB46(3)                 <-------GAMYB                     >>>>>>>>>SARD1---------->DOF2   -------->P  <-----------HVH21      --------->ATHB12--------->YAB1     >>>>>>>>>CBP60g  --------->At4g35610 --------->MYB46(3)                   <---------MYB46(3)          ----------->GT1   --------->TOE1(2)   aaaacaaccactgattctgtgaggcatttcatcaaacacttggttggcaacaacaataagaacagagcaagtgaaatttggacaaacctacaagctgaaa  2871000             --------->ANAC46          <---------ARR14(2)          ------->MYC2          <-------MYC2          ------->MYC3    --------->YAB1          <-------MYC3 --------->YAB1         <----------TaMYB80 --->GLK1(1)<---------LBD16                   ---------->DOF2                           <---------ANAC55(2) -------->DOF2--------->LBD16     ---------->DOF2                                   <-----------HVH21   tcaaaggaagcatatgcggaatcaacaataacaacgaatagcgaagaacaaagcgatgaagttgcatcaagacaaaaatcgacgagagtcacatgaacga  2871100                                                                                           *TSS                                                                                      --------->LBD16                                                                                      <---------At4g35610                    <------ZmHOX2a(1)                                                 --------->At4g35610                 <---------LBD16                                                      <------NtERF2                 <-----------RAV1(2)                                                --------->SPL7               -------->P                                                       <-------TEIL              --------->MYB52(1)                                            --------->ARR11(3)            <---------MYB52(2)           <------ZmHOX2a(2)        ---------->DOF2   <---------LBD16         --------->ZAT14 --------->At4g35610              <------ZmHOX2a(2) <---------ARR11(3)  ----------->HVH21 ============================HOX2a_HOX2a    --------->At4g35610<---------SPL7   atatttgacagagaactaaccaggagtagcagtcgagagagagatcgaagcgagggagagatcgaagctaaagagagagagcttcgtccgcagagagaga  2871200                                                                                    --------->O2                                                                                    <---------O2                                                                                    --------->TGA1a                                                                                    <---------bZIP60(2)                                                                                    <---------TGA1a                                                                                    --------->ANAC55(2)                                                                                    <---------ANAC55(2)                                                                                    <---------ANAC58                                       --------->bZIP60(1)                    --------->ZAT18                                       --------->O2                        <------------CBF                                       <---------O2                ===========================MYC_MYB                                       <---------bZIP60(1)         ------->GAMYB    <---------ANAC46                                  <---------ICU4       --------->ZAT18    --------->ATHB12                                 <---------ATHB12      <---------ZAT14    <---------ICU4                             ------------>CBF          --------->ZAT14<---------MYB46(3)        <----                --------->ARR14(2)--------->YAB1 <----------DOF2--------->MYB52(1)  <---------ANAC58                <---------ARR14(2)--------->MYB52(1)   <---------ZAT18----------->GT1           <----        <---------SPL7  <---------AHL20(2)       =============================================bZIP_DOF   acaaaatcgacgtatgcggtttctgttttattccaataacgacgtcgtttgcattagtgaactattcaacggtggataattgcgctacgtggctacttgc  2871300                                                                              --------->ANAC46                                                                              *TSS                                                                ----------->GT1                                                                --------->LBD16      --------->YAB1                                           <---------HSFB2a(2)      <---------ICU4                                           --------->HSFB2a(2)     <---------ATHB51                                          <---------HSFC1(1)     --------->ICU4              <---------ALFIN1             <---------LBD16 <----------ID1 --------     <---------ATHB12         <-----------GT1               --------->GLK1(2) --------->ANAC58 ------------>CBF   <---------SPL7                       --------->AHL20(2)   --------->ANAC58 -----ANAC58       <---------TGA1a                 ----------->RAV1(1)    ---------->DOF2   --------- -----ANAC58       --------->TGA1a------>NtERF2--------->MYB46(3)    --------->AHL20(2)     <--------   ttagccaataatgagtttcagacgtccgatttttgccaccttgtcttcaacaacaacaaaaaattctggaaaaaaataaaacgcaaaactgaagaaatct  2871400                ------->GAMYB               --------->MYB46(3)       ------>NtERF2       --------->LBD16      --------->ANAC58      --------->ANAC58                                                                            <--      --------->ANAC46                                                                            <--      --------->RAP2.6(2)                                   <---------AHL20(2)     --------->At5g28300      ------->GAMYB                                        <---------AHL20(2)   --------->HSFB2a(2)     --------->MYB46(3)                    --------->ARR14(2)     --------->WOX13(1)             ----    <---------At4g35610              <-----------GT1       --------->AHL20(2)   <---------HSFB2a(2) < ->ARR11(3)  <---------DOF5.7(2)    <---------YAB1    <---------ANAC46      <---------GLK1(2)    <--- >GLK1(1)    --------->MYB52(1) --------->TOE2(3)     <---------ANAC58     <---------At4g35610   <--- -GLK1(1)  --------->DOF5.7(2)  --------->YAB1        <---------ANAC58  <---------MYB52(1)    -------   cgtttcatccgccattaacgacctctcaaggtaatcttattactatatatgctcttgggtattaatttcaatctgttagcttctcggtgaaaaactcgat  2871500                                            ------>ZmHOX2a(2)                                           <------ZmHOX2a(2)                                          <---------AGP1                                          --------->ARR14(2)    <----------DOF2                       <---------ARR14(3)   <---------ANAC58                       --------->AGP1   <---------ANAC58                       <---------ARR14(2)  <------NtERF2                           --------->ARR11(3) xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)       <---------ARR11(3) ----MYB83                              ----------->ARR10 ----MYB46(1)                        --------->STY1(2)                 --------->YAB1 ----->MYB55(2)                <----------DOF2                        <---------YAB1         -------- ---------RAP2.6(2)      --------->ANAC58 --------->ARR14(3)      <---------ANAC58           <------- ------AtMYB61           --------->ANAC58<---------CCA1(2)    <---------WOX13(1)             <------- ------MYB46(3)         <---------------------WRI1--------->ATHB12<---------ANAC58       <---------MYB52(1) -->ATHB12     ------>ZmHOX2a(2)     <---------STY1(2)     <---------AHL20(2) <-------TEIL   <-------   tggtggctttattttgatctcagtagtacgatactttctagctagatcttcttcattgaatgtaattggcttatcatagattcatttctccattactttt  2871600                                                                                            ---------                                                                                            ---------                                                                                        --------->ANAC46                                                                                        --------->ANAC58  <---------ANAC58                                                                      --------->ANAC58  <---------ANAC58                                                               --------->ARR14(2) ------->AGL15           <-------TEIL                                            <---------ARR14(2) --DAG2           --------->YAB1               <----------DOF2                   ------->TEIL-------- --------AGL15   <---------YAB1        --------->ATHB12   --------->TOE1(2)     <---------CCA1(2) ---DOF2      <---------YAB1          --------->AHL20(2)------->TEIL          --------->ALFIN1   ----   ttttgctagtgaaattgtgatcatagattcatctctgcgatttattaggctttctatgaacatgagaagagtgtttggaggtgtatctacaggcaagtat  2871700                                               <---------ICU4                                              <-------TEIL     <---------YAB1                <---------ANAC58                                   <---------At4g35610   <---------ICU4                  <---------ANAC46                               <-----------RAV1(1)   --------->YAB1                 <---------STY1(2)    -------->P                <---------TOE2(3)  --------->ICU4                  <---------ZAT2    <---------ANAC58            <---------ICU4 >ANAC58  --------->KAN4(2)       --------->STY1(2) <---------ANAC58            --------->YAB1 >ANAC58 <---------KAN4(1)      ------>ZmHOX2a(1)   --------->ANAC55(2)  ----------->GT1       <----- ->ICU4 ------->TEIL   <----------DOF2    <---------YAB1               --------->ICU4 --------->At4g35610 ----->YAB1       ------>ZmHOX2a(1)<---------ANAC58 <---------ANAC55(2)<---------ATHB12    <---------   gagaataatgaatgttcttcctcatctttgtgtcctagcttgttttgattcattacttacctatgcaaatgcaatgagttaataatgttgctgagttttt  2871800                                                  --------->At4g35610                                                  <---------At4g35610                                               <---------ATERF1(1)                                               <------NtERF2                                               --------->At4g35610                                               <---------At4g35610                                              <---------ATERF1(1)                                              <---------DEAR3(1)                                             --------->SPL7                                           --------->ANAC46                                          <---------RAP2.6(2)                                          <---------ATERF1(2)                             --------->HSFB2a(2)  <---------ZAT14                             <---------HSFB2a(2)  --------->ZAT14                          <-----------HVH21<---------SPL7                         --------->ANAC46 --------->ATERF1(2)                         <---------ANAC58 --------->MYB46(3)                         <------ZmHOX2a(1)             --------->HSFB2a(2)        --------->MYB52(1)                         <---------TOE2(3) <----------DOF2<---------GLK1(2)       ------->TEIL     <---------LBD16         ---------->DOF2 ------GT1   <---------HSFB2a(2)       <-----------GT1  --------->ALFIN1    ----------->GT1 ---------------ANAC81   <---------ANAC58--------->DEAR3(2)              <-----------RAV1(1)   cttcttttccttcttctagatttgtttccgtcgcgaagtatgtaccggccgctgcagtctgggggaaacttggttatgttgtttaaaggatgcagacggt  2871900  Previous    Next  AGI:  At5g09225.1    Description:  similar to hypothetical protein OsI_033804 [Oryza sativa (indica cultivar-group)] (GB:EAY79845.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABG22350.1) Range:  from: 2869363    to: 2871191    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g09230.1    Description:  SRT2; DNA binding. similar to SRT1 (SIRTUIN 1), DNA binding [Arabidopsis thaliana] (TAIR:AT5G55760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71672.1); contains InterPro domain NAD-dependent histone deacetylase, silent information regulator Sir2; (InterPro:IPR003000) Range:  from: 2871378    to: 2873790    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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