Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           --------->ZAT14                                                                         <---------ZAT14                                                                    <---------At4g35610                                                                    <------NtERF2                                                                <---------ATERF1(1)                                               <---------AHL20(2)   --------->At4g35610                                    ----------->RAV1(1)         ------>NtERF2                       <                         <------ZmHOX2a(1)     --------->AHL20(1)  ==========================RAV  <--                      --------->HSFB2a(2)      --------->ARR11(3)  ----------->RAV1(1)       <-------              --------->YAB1       <---------ALFIN1            --------->ANAC46              -------- --------->YAB1       <---------HSFB2a(2)   --------->AHL20(2) <---------DEAR3(1)      --------->AHL20(2) ------->AtLEC2       <---------LBD16       <---------AHL20(2)--------->RAP2.6(3)   <------ZmHOX2a(1) ------->ANAC58  <---------ICU4   --------->MYB46(3)         ------->GAMYB       <-----------RAV1(2)< ------->ANAC58 --------->ICU4  <-----------GT1<---------AHL20(1)<------NtERF2   <---------LBD16  <-- ------>WOX13(1)<---------YAB1--------->ARR11(3)            --------->MYB46(3)   ====================   caagcaaaatagcatctcataattcgaggaaatatcaccaccatattaaaatattgcatacaacgacggcagcactacattgctcaggataaaatgtgtt  2825300 --------->ARR14(2) <---------ARR11(3) --------->ARR11(3) <-----------ARR10 <---------ARR14(2) ---------CCA1(2) -------ANAC58                                              --------->YAB1 <---------ANAC58 ----RAV1(1)                                  --------->AHL20(2)           <---------ANAC58 ->ALFIN1                                     --------->AHL20(1)     <---------ICU4                <- ---------GLK1(1)                 <---------AHL20(2)       <---------YAB1<-----------GT1   <---------AHL20(2) -------ANAC58         --------->ARR11(3)     <---------AHL20(2)--------->AHL20(2)         --------->AHL20(2) ====RAV     <-----------GT1     <---------YAB1    <-------TEIL <---------AHL20(2)      ------->TEIL   gcatatctcggtattttaccaaaaatatgttgatttttatttgaaaaataaaatacatactatcattttaatatttatcgtgtctaaatgtattttttta  2825400                                    --------->ANAC58                                    --------->ANAC46                   ---------->DOF2  --------->ANAC58          <-----------GT1         ---------->DOF2                 <---------ARR11(3)      <----------DOF2    ----------->GT1          --------->TOE2(3)              --------->AHL20(2)    <---------YAB1<---------------AGL15           --------->TOE1(3)          <---------AHL20(2)   <-----------GT1--------------->AGL15         --------->ARR11(3)--------->AHL20(1)          -------   <---------ARR11(3)  <---------ARR11(3)       <---------ARR11(3)<---------AHL20(1)    --------->WRKY38(1)   --------->ARR11(3)  --------->ARR11(3)      --------->GLK1(1)  --------->ARR11(3)    --------->WRKY12 --------ICU4<----------DOF2<---------AHL20(2) <---------GLK1(1) --------->YAB1  <---------AHL20(2)   aaaattatctttatacttttctaaagatagttaaatgaaagcaacttggaaatcttaaaaccatcaaaaatatttgtgtttaataaaactttgaccttgc  2825500     <---------AHL20(2)   <---------AHL20(2)               --------->LBD16  <---------ARR11(3)            <------ZmHOX2a(2)  --------->AHL20(2)           --------->ARR14(2)  --------->AHL20(1)           <---------ARR14(2)      <------------------------ANAC81    --------->YAB1  --------->ARR11(3)        --------->MYB46(3)  --------->TOE2(3)          <---------MYB52(1)  <---------AHL20(2)   --------->TOE2(3)    <---------WRKY38(1)           <----------DOF2<---------YAB1  <---------AHL20(1) <---------ARR11(3)     <---------WRKY12              ------>ZmHOX2a(1)  -------- --------->AHL20(2)  --------->ARR11(3)    --------->WRKY18(1)        <-----------GT1  --------->YAB1 -->AtLEC2          --------->RVE1(1) ---------->DOF2 <----------DOF2<-----------GT1--------------->AGL15   aaaatatatttttgttaactaaaaatctcaaccgatcccccaaaggtcaacctcatcttttttttttttttttatcctttagttttctattatgataaag  2825600                                                               <------------CBF                                                              --------->ATHB12                                                             <---------ATHB12                                                            ------>MYB83                                                            <<<<<<<<<<<<<<<<<LFY                                                            ------>MYB46(1)                                                          <---------MYB55(2)                                                          --------->AtMYB61                                                          <---------MYB46(2)                                                          <---------MYB111(1)                                                          <---------MYB111(2)                                                          --------->MYB46(3)               --------->At4g35610                                                         --------->ANAC58                 --------->ALFIN1                                                         --------->ANAC46               <---------At4g35610                                                         --------->ANAC58             <-----------RAV1(2)     --------->AHL20(2)                               --------->DEAR3(1)             <-------TEIL    <---------AHL20(2)                                --------->ZAT18            ----------->ARR10    --------->AHL20(2)  <---------MYB52(1)          --------->PCF2           --------->At4g35610 -->DOF2         <---------ICU4                ----------->RAV1(2)           <---------At4g35610   <-   acccaaataaataagcccattattctgttttgttcaaaataagcccattatctgagcccaccaaacattggaaagtttgagcttagattcaggtgctgta  2825700                                                                                             --------                                                                                             <-------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                           --------->RAP2.3(1)                                                                                        ------>ZmHOX2a(2)                                                                                       --------->CCA1(2)                                                                                       <---------At4g35610                                        <---------ANAC58                               <------ZmHOX2a(2)                                        <---------ANAC46                              <---------ARR14(2)                                        <---------ANAC58                              --------->ARR14(2)                                   <---------ICU4                                     <---------AGP1                                  <---------ATHB12                                    <---------ARR11(3)                               <---------ALFIN1                                       --------->AGP1              <---------ARR14(2)------>MYB46(1)                                       --------->ARR11(3)              *TSS------>ZmHOX2a(1)--------->YAB1                                  <--------P------>NtERF2             <---------GLK1(1)--------->MYB46(3)                                  <---------MYB52(1)       <---------ANAC58       <---------MYB55(2)                                 --------->LBD16       <---------ANAC58      --------->ANAC58               <---------CCA1(2)   --------->HSFB2a(2)      <---------STY1(2)      --------->ANAC58             --------->YAB1        <---------HSFB2a(2)      --------->ZAT2       <---------ALFIN1             <-----------GT1        <---------LBD16      <---------ZAT2     --------->ANAC46   --------->HSFB2a(2)            <---------At4g35610<------NtERF2      --------->STY1(2)  <---------ALFIN1 <------NtERF2<-----------GT1  <-------TEIL----------->ARR10 ----------GT1--------->ARR14(2)------>MYB83<---------HSFB2a(2)        <---------MYB52(1) --------->At4g35610   gttaccctagcttgcatttcctcttccacacacccactcatggcgtctcgaagagttttatcatctcttctccgttcatcttccggtagatctgccgcca  2825800                                                                                   ------>NtERF2                                                                                  --------->DEAR3(1)                                                  ------>NtERF2                  <------NtERF2                                              <---------TGA1a                 --------->ATERF1(1)                                              --------->ANAC46                <------NtERF2                                              --------->TGA1a                <---------ATERF1(1)                                              --------->ANAC58               <-----------HVH21                                              --------->O2                  --------->TGA1a                                              ==========================MYC_MYB ------>NtERF2                                              --------->ANAC58              <---------DEAR3(1)                                              <---------O2                  --------->O2                                            <---------ALFIN1                <---------O2                                           ----------->HVH21                --------->bZIP60(2)        ------->GAMYB                     <-----------HVH21                <------NtERF2    <---------WRKY12                     --------->ANAC46                  --------->ATERF1(1)    <---------WRKY38(1)                  --------->ANAC58                  ------>NtERF2   --------->WRKY18(1)                   --------->ANAC58                 <---------ATERF1(1) ->LBD16================================================MYC_MYB=======================MYC_MYB --RAP2.6(3)                             --------->bZIP60(2)   -------->P --------->RAP2.6(2) >DEAR3(1)                            <---------LBD16       <---------At4g35610--------->DEAR3(1) >RAP2.6(2)                           --------->LBD16       --------->At4g35610<---------DEAR3(1) >ATERF1(2)                      <---------ALFIN1 <---------At4g35610    <---------DEAR3(1) -ATERF1(2)     <-----------RAV1(2) --------->MYB46(3)     ------->TEIL ------>NtERF2 >RAP2.3(3)--------->ARR14(2)  <-----------HVH21  --------->At4g35610------>ZmHOX2a(1)    ----------- >RAP2.3(2)<---------ARR14(2)  ------>ZmHOX2a(1) --------->DEAR3(1) --------------------->WRI1   <---   aattagtcaaccgaaaccccaggcttccttctccttcacccgcgcgtcacgccgctccatgtagctacctcctcggccgcgtcgccgagtatgcgacctc  2825900                    <---------ALFIN1                  ------>NtERF2                 --------->ANAC46                 --------->ANAC58             --------->ZAT2             ----------->RAV1(2)             --------->At4g35610             <---------At4g35610             <---------ZAT2            <-----------RAV1(1)         <---------ARR11(3)        <---------ZAT2                                                 <------NtERF2               <-       ----------->ARR10                                         <---------At5g28300              ---       --------->ANAC58                                      <---------ICU4             <---------ANAC46  <---------ATERF1(2)                   <------ZmHOX2a(1)    --------->YAB1             <---------ANAC58  --------->DEAR3(1)--------->DEAR3(1)<---------TOE1(3)      --------->ATHB12       ------>ZmHOX2a(2)  --------->ATERF1(2)       --------->At4g35610             <---------ATHB12   <-------TEIL       >>>  --------->DREB2C(2)       <---------At4g35610        --------->ARR11(3)    --------->TOE1(2) <----- <---------LBD16 --------->ANAC58------>ZmHOX2a(1) ---------->DOF2    ------>NtERF2<------ZmHOX2a(2)< >HVH21--------->ANAC58  ------>ZmHOX2a(1)  --------->ALFIN1<---------YAB1 --------->DAG2 --------->ALFIN1 --------HVH21 <---------ATERF1(1)    <---------TOE2(3)<---------ARR11(3)---------->DOF2<---------ANAC58   ttcaccggcaagctctgctgcgccatcctctgctcctgctaaggatgaggggaaaaagacctatgattacggtggcaaaggtgcgatcgggcgtgtttgt  2826000                                           ===================HOX2a_HOX2a                                       <------ZmHOX2a(1)<---------ICU4                                       =======================HOX2a_HOX2a                      <-----          <------NtERF2             xxxxxxxxxxxxxxxx>smallRNA(fl3)              <------ZmHOX2a(2)         --------->ABI4(2)          <-----------RAV1(2) --------->YAB1         --------->ARR14(2)      <---------DEAR3(2)           <------ZmHOX2a(2)   <---------ATHB12        <---------ARR11(3)   <     <---------DEAR3(1)            ===============HOX2a_HOX2a                  --------->ARR11(3)  <-  <---------WRKY38(1)             --------->ARR14(2)   ==============================HOX2a_HOX2a   <-  <---------WRKY12                <---------ARR14(2)   <------ZmHOX2a(2)       <-----------ARR10  <-- --------At4g35610               <------ZmHOX2a(1)------>NtERF2               <------ZmHOX2a(1)<----- ------>MYB59                    =============================HOX2a_HOX2a  <-----------RAV1(2) <----- >>>>GRF7------>NtERF2      <-------TEIL   <------ZmHOX2a(1)              <-------TEILxxxxxxxxxxxxxxx ------HVH21               --------->GLK1(2)    <---------ANAC58      <---------TOE2(3)       ------- -----------HVH21          --------->CCA1(2)    <---------ANAC58      <---------TOE1(3)       <------   caggtcatcggtgccattgtcgatgtgagattcgaggatcaggaaggattgcctccgatcatgacatctcttgaggttcaggatcatcccacaaggctgg  2826100      --------->ALFIN1                                                            --------->HSFB2a(1) -MYB46(1)                                                                        <---------HSFB2a(1) ----------DOF2                                                                   --------->HSFC1(2) --------ANAC58                                                         <---------LBD16          xxxx --------ANAC58                                                         --------->LBD16    --------->ZAT6 -------MYB46(3)                                                       <---------ANAC46    <---------ALFIN1 -MYB83                                                                <---------ANAC58   --------->ZAT14 ----At4g35610--------->ATHB12                                   <---------ANAC58 <---------HSFC1(2) xxxxxxx>smallRNA(l2)                <------ZmHOX2a(1)         --------->ARR11(3) <------MYB46(1)xxxx -->ALFIN1    <---------ICU4       --------->MYB59   <------MYB46(1)   <---------ANAC58   <---------ZAT14 ---MYB46(3) <---------YAB1      <---------MYB52(1)  <------MYB83<---------ANAC58 <------MYB83<------   tgcttgaggtgtctcatcatttgggtcaaaatgtcgttaggaccattgctatggatggtactgagggtcttgtccgtggaaggaaggttctcaacactgg  2826200  Previous    Next  AGI:  At5g08690.1    Description:  ATP synthase beta chain 2, mitochondrial. Identical to ATP synthase subunit beta-2, mitochondrial precursor [Arabidopsis Thaliana] (GB:P83484;GB:Q8RY05;GB:Q8VX26;GB:Q9C5A8;GB:Q9C5B0); similar to ATP synthase beta chain 1, mitochondrial [Arabidopsis thaliana] (TAIR:AT5G08670.1); similar to ATP synthase beta chain, mitochondrial, putative [Arabidopsis thaliana] (TAIR:AT5G08680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42228.1); similar to ATP synthase subunit beta, mitochondrial precursor (GB:P17614); similar to hypothetical protein [Vitis vinifera] (GB:CAN69512.1); contains InterPro domain ATPase, F1 complex, beta subunit Range:  from: 2825714    to: 2828663    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version