Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            <---------MYB52(1)                     --------->ZAT6                                                      --------->At5g28300                   --------->MYB52(1) <---------AHL20(2)                            --------->ZAT18    <---------WRKY12<---------At5g28300                                            >>>>>>>>>>>>>>>>>LFY    <---------WRKY38(1)         <---------ANAC55(2) --------->DAG2             ---------->DOF2 <------MYB46(1)   <<<<<<<<<<<<<<<<<LFY            ---------->DOF2      <----------DOF2 ----------->GT1 <------MYB83      <-----------GT1  <---------AHL20(2)                  <---------DAG2  <---------ZAT6   gggaggtcaaagttttcgaattaacagtggtattacatatatttttggtgataaaaagtcatatcagtagcaaactttttgaaaagaccactgttaattc  2821500                  <---------DAG2                  <----------DOF2                    ---------->DOF2                            <----               <-----------GT1            <---------MYB52(1)                                ---------        --------->ANAC58                <---------ANAC58                            <-----------GT1        --------->ANAC58                <---------ANAC58       <-----------RAV1(1)<---------WOX13(1)   gacattacacaaacaattcactttacaaatctatctgaattttcgtttgtataacaaaagttcaaatgttgggaacatcgtttgattaacaaaatagtta  2821600                                                                              <---------ZAT18      <---------ANAC55(2)                                               >>>>>>>>>>>>>>>>>LFY      --------->ANAC58                                                <---------At4g35610      --------->ANAC58                                                --------->At4g35610    <---------ALFIN1                                             --------->ANAC58  <---------At5g28300                                            --------->ANAC58     <---------YAB1 ---TEIL                                                    --------->ETT(2)  <---------ZAT14 -->GT1                                                     <---------ETT(2)  --------->ZAT14    <---   cattcaccacgtatggtttacatatgatgaagatgagaaaatggtctagtttttgttatttgtcgacaagtaagctccagtgtacattttgtttgttttt  2821700                                          <------MYB83                                          <------MYB46(1)                                          <---------ANAC46                                         <------MYB46(1)                                         <------MYB83                                       <--------P                                           ------->GAMYB                                      <---------ANAC58                                      =========                                      <-------GAMYB                      <-----------GT1   --------->MYB46(3)              --------->ARR14(2)      <---------ANAC58                <---------ICU4      --------->At4g35610              <---------ARR14(2)     <------MYB83--------->YAB1   <---------YAB1         --------->MYB52(1)             --------->GLK1(1)       <------MYB46(1)        <---------TOE2(3)           <---------WRKY38(1)          <<<<<<<GRF7               --------->MYB59      <------ZmHOX2a(2)             --------->MYB46(3)        ----------->HVH21           <---------AtMYB61   <---------ARR11(3)             <---------ATHB12        ------>ZmHOX2a(1)       <---------MYB46(3)  ---------->DOF2  <---------YAB1   --------->ANAC46 --------RAV1(1)       <---------ICU4<---------MYB46(3) --------->ARR11(3)           --------->WOX13(1)   tgttgttgtcctgacatatccaaactaattacattggtttggttgggttaatgagaaagatcaacgttttgattatttccttccatccaatcaacggcct  2821800                                    --------->YAB1                           --------->ALFIN1                           <-----------RAV1(1)                          ------->MYC4                          <-------MYC4                          ------->MYC3                          ------->MYC2                          -------->ABF1                          <-------MYC2                          <-------MYC3                         --------->ANAC46                         <---------O2                         <---------ANAC55(2)                         <---------TGA1a                 --------->At4g35610                         --------->TGA1a         <-----------HVH21                         --------->O2           <---------ANAC55(2)                         --------->ANAC55(2)    --------->ANAC55(1)    --------->ANAC46              ----------->GT1     <-----------HVH21  <---------ANAC46  --------->ANAC58             ----------->GT1  <---------ANAC46  --------->ANAC58       --------->ANAC58           --------->GLK1(2)<-----------HVH21   --------->ANAC55(2) <---------WRKY38(1)          <---------GLK1(2)----------->HVH21    --------->ANAC46 --------->ZAT18            <-------- ==================================MYC_MYB      --------->ANAC58--------->ALFIN1         ----------->GT1   tgatatggaatagaatcggaaaatcacacgtgtcgcagtcagaacaaaacacgttacgcagaagaagtggtctacgctactgaatcgaagagagttatat  2821900                                                                                             <-------                                                                                             <-------                                                                                             <-------                    --------->ARR11(3)                                                <-----------HVH21                    <---------ARR11(3)             <----------DOF2  <---------DAG2<---------ALFIN1          --------->At4g35610          --------->TOE2(3) <-----------GT1         --------->ANAC46   <      --------->ALFIN1       *TSS     --------->ZAT6   <-----------GT1         <-----------GT1     <- ---TBP <------ZmHOX2a(1)   --------->ATHB12       <---------DAG2   <----------DOF2--------->ZAT14<--   agagagaagaggagctacaagagaacttattcatttgataaccctagtagctccttttttctctatctcgctttctctgtttcaccacagtcatggcgag  2822000                                                                                                    -                                                   --------->ARR14(2)                               <    --------->ARR14(2)                   =====================HOX2a_HOX2a                        ----    <---------ARR11(1)                  ======================HOX2a_HOX2a                       -----    ------->TEIL                        <------ZmHOX2a(2)                                       <----    <---------ARR14(2)                 --------->ARR11(3)                                       -----    <-----------ARR10                  <---------ARR14(2)             --------->RAP2.6(2)       -----    --------->GLK1(2)                  <---------ARR11(3)            --------->RAP2.3(1)        <----   <---------CCA1(2)                   --------->AGP1               <---------At4g35610         <----   <---------ARR14(1)                  <---------AGP1               --------->At4g35610        <----- --ANAC46                              --------->ARR14(2)      <---------LBD16              --------- --ANAC58  --------->YAB1            ----------->ARR10         ------>ZmHOX2a(2)            <-------- --ANAC58 <---------YAB1         <---------HSFB2a(2)   ===============HOX2a_HOX2a          <---------LBD16 ------NtERF2               <<<<<<<<<TBF1------>ZmHOX2a(2)  --------->ATHB12           <-----------GT1 --------ORA47(2)       <---------MYB52(1)         <---------ARR14(2)<------NtERF2 <----------DOF2<-- -------DEAR3(1) <----------DOF2 --------->HSFB2a(2)   ------>ZmHOX2a(1)      --------->LBD16--------   tcggcgaatcttatcatcgcttctccgttcttcttcgagtagatctacttctaaatcctccttgatcgggagccgaaacccgaggcttttatcccccggt  2822100 --------->ANAC58 --------->ANAC58 -------->LBD16 ---------LBD16 ----->SPL7 ---->ARR14(2)                                   <---------ARR14(2)                       <---------At4g35610 -----ARR14(2)                                   --------->ARR14(2)           <------NtERF2 ---->PCF5          --------->ALFIN1         ------>NtERF2                    <---------ZAT14 ---->PCF2<------NtERF2<---------PCF2       --------->DEAR3(1)               <---------ATERF1(1) -----TCP20--------->DEAR3(1)              <------NtERF2                   <---------At4g35610 -----TCP15(1)     <-------MYC3          <---------DEAR3(1)                --------->At4g35610 ------HVH21--------->At4g35610          --------->DEAR3(1)                ----------->RAV1(2) >LBD16   --------->ATERF1(1)           --------->ATERF1(1)              <---------RAP2.6(2) -LBD16   --------->RAP2.3(1)          <-----------HVH21         ------>NtERF2--------->ZAT18  ------ -------LBD16      ------->MYC3      <------NtERF2               --------->LBD16  <---------ALFIN1 ->LBD16 <---------At4g35610  --------------------->WRI1       <---------LBD16--------->At4g35610  --   cccgcgcatggagccgctccatgtgggactctccttggccgagtcgccgagtattcgacttcttctccggctaattcggctgcaccatcttctgctcctg  2822200                                                            >>>>>>>GRF7                                                         <-----------HVH21                                                      --------->ALFIN1                                                      <---------ANAC58                                                  <---------ANAC46                                 <------NtERF2    <---------ANAC58                                ------>NtERF2<------ZmHOX2a(2)                                    <--                       --------->ATHB12     <---------ARR14(2)                                   <---                       --------->YAB1       --------->ARR14(2)                                  -----                       <---------ICU4     <------NtERF2 ----------->HVH21                       <----                      <---------YAB1      ----------->HVH21<-----------RAV1(2)                  XXXXX                      <---------ATHB12   ------>NtERF2<---------ANAC58                          <----          ---------->DOF2  <---------At5g28300------>ZmHOX2a(2)                           <-------TEIL >ZmHOX2a(1)     --------->ARR11(3)  --------->DAG2 --------->ALFIN1    <------NtERF2    --------->CCA1(2) -------->DOF2   <---------ARR11(3)---------->DOF2<---------ANAC58     ------>NtERF2     --------->GLK1(2)   ctaaagatgagggaaagaagacctatgattacggtggcaaaggcgcgatcgggcgtgtgtgtcaggttattggtgccattgttgatgtgagattcgaaga  2822300                                                         <------MYB46(1)                                                        <---------MYB46(3)            ------>NtERF2                               --------->MYB59          <---------ANAC58                              <---------AtMYB61          <---------ANAC58                             <--------P       --------->GLK1(1)                      --------->MYB46(3) <------ZmHOX2a(1)                        <------ZmHOX2a(2) =======================HOX2a_HOX2a       ===========================HOX2a_HOX2a ---------RAV1(2) <---------ICU4         --------->ARR11(3) ---ZmHOX2a(2)    --------->YAB1         --------->ARR14(2) ---->ARR11(3)   <------ZmHOX2a(2)       <---------ARR11(3)         --------->ALFIN1 -----ARR11(3)   <---------ATHB12       <------ZmHOX2a(1)<------MYB83                              <- XXXXXXXXXXXXXXX>MIR390A/B          <-------TEIL    <---------TOE2(3)                            ---- -----ARR14(2)   ==============================HOX2a_HOX2a    ------>ZmHOX2a(1)                <-----   tcaggagggattgcctccgatcatgacatctctcgaggtacaggatcatccaacaaggttggtccttgaggtgtctcatcacttgggtcaaaatgtcgtt  2822400  Previous    Next  AGI:  At5g08680.1    Description:  ATP synthase beta chain, mitochondrial, putative. Identical to ATP synthase subunit beta-3, mitochondrial precursor [Arabidopsis Thaliana] (GB:Q9C5A9); similar to ATP synthase beta chain 1, mitochondrial [Arabidopsis thaliana] (TAIR:AT5G08670.1); similar to ATP synthase beta chain 2, mitochondrial [Arabidopsis thaliana] (TAIR:AT5G08690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42228.1); similar to ATP synthase subunit beta, mitochondrial precursor (GB:P17614); similar to hypothetical protein [Vitis vinifera] (GB:CAN69512.1); contains InterPro domain ATPase, F1 complex, beta subunit; (InterPro:IPR005722); contains InterPr Range:  from: 2821929    to: 2824967    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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