Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           <---------ARR14(2)                         --------->ARR14(2)                   <---------ANAC46      <----------ID1--------->ANAC58          --------->ANAC58            --------->MYB52(1)          --------->ANAC46  --------->HSFB2a(2)        --------->ANAC58      --------->YAB1     --------->GLK1(2)    ----------->GT1--------->DAG2 ------>ANAC58    <---------LBD16 <---------------------WRI1---------->DOF2             --------->ANAC55(1) ------>ANAC58  <----------DOF2 --------->DAG2--------->ANAC58              --------->YAB1    ------- ----->DOF2  <---------ALFIN1  ---------->DOF2--------->ANAC58   ----------->GT1       ------->MYC3 ->DOF2   --------->ANAC58  <---------HSFB2a(2)        --------->ANAC46 ---------->DOF2<-------MYC3   aagcactatcatgcgccactttcggagaatccagaaggcgaaacggacaagtaaaacacacaaaaagcagtcaaaaaagcataacaacacatgtaacaaa  2802800                                         <---------HSFB2a(1)                                         --------->HSFB2a(1)                                         --------->HSFC1(2)                                     ----------->GT1                       --------->MYB46(3)<---------HSFC1(2)                <---------YAB1       --------->ANAC58               --------->TOE2(3)--------->ANAC58                             --------->ANAC58              <---------ICU4    --------->ANAC46                 --------->YAB1          --------->At4g35610              --------->YAB1    --------->ANAC58            ------->GAMYB    ----------->GT1  --------->CCA1(2)  --------->YAB1  --------->ANAC58      --------->ANAC58  --------->ANAC58       < --->DOF2    <---------ATHB12 --------->MYB52(1)           --------->ANAC58---------->DOF2    -------   gaagagacgaacacaatcatcaataacaaacaaaacggaacgaaaattcgaagctaatgcaacgaaatcacaacgaagaaagcaaaatcgcagaagaaaa  2802900               <---------ALFIN1               ----------->RAV1(1)             --------->LBD16                                                        --------->LBD16             ------>NtERF2                                                         <---------ANAC46            --------->ANAC58                                                      <---------LBD16            --------->ANAC46                                                     --------->MYB52(1)            --------->ANAC58                                                 <---------ARR11(3)   ------>ZmHOX2a(2)                                                         --------->ARR11(3) --------->ARR14(2)                                  ------->GAMYB           --------->GLK1(2) <---------ARR14(2)  ---------->DOF2              --------->MYB52(1)    --------->YAB1 ------ZmHOX2a(1) ----------->RAV1(1)      --------->YAB1              <---------ATHB12 --->DOF2  <---------LBD16    --------->ATHB12 --------->ANAC46      --------->WOX13(1)         <----   gaggatcgatgttcccgccacaacaaagaaaacgattggagagaattataaacaacgaaattagagagactcaatcaaaaatcttacggagaatgtatga  2803000                --------->ETT(2)             --------->DEAR3(1)                                     --------->DEAR3(1)             <---------DEAR3(1)                                   <---------At5g28300             <---------ANAC46                                   ----------->HVH21            <------NtERF2                 ---------->DOF2      ------>ZmHOX2a(2)           <-----------HVH21           --------->ANAC58       <------ZmHOX2a(2)        <---------ANAC58               --------->ANAC58      --------->ARR11(3)        <---------ANAC58     --------->ALFIN1                <---------ARR11(3)    <-----------GT1 -----AHL20(2) <------NtERF2 <---------AtMYB61        --------->ALFIN1         --------------------->WRI1   aattgggaatgcgcgtcgtcgagagagagaggtggtctctcaaggaaagaatacaagtgttgagatctcaccgtctctcttcgtttttctcttcgctctc  2803100                                <------NtERF2                              <---------DEAR3(1)                          <---------AtMYB61      ---------->DOF2                      <----------DOF2     ------>ZmHOX2a(1)                  <---------At4g35610   ----------------->AGL1    --------->TOE2(3)         <--------                  --------->At4g35610 ------>ZmHOX2a(1) ----------->GT1                    <---------DAG2                  <---------ZAT2--------->ATERF1(1)    ----------->GT1  *TSS     <-----------GT1   tctctctctctctcgctctcagctctttttggtcgtcgtccttccttatgggaaagacgggaaaaaaaacttaatatgcgaattagcctctcaccttttt  2803200                                                                                    <-----------GT1                                                   <---------REM1(1)        <---------ZAT14                                                   <-----------RAV1(1)      --------->ZAT14     -----          --------->ARR11(3)                   ================RAV     <---------ZAT14 <----------DOF2          <---------ARR11(3)                   <-----------RAV1(2)--------->ZAT18   ---------->ID1      <---------AHL20(2)         <----------DOF2   --------->ALFIN1    --------->ZAT14 <---------DAG2 --DOF2  <---------CCA1(2)      --------------->AGL15             <---------ZAT18  <-----------GT1   tttgttattttatatcttaagtagcactcggtttcctttttttgtttatacaggtgttgctgttttagagccctatactgtagtttttcctttttctata  2803300                                                             <------MYB46(1)                 <-------                    <---------ANAC58              --------->AHL20(2)                     <---------ANAC58                    <---------ANAC58            <----------DOF2                          <---------ANAC58               <---------ANAC58                <-----------------AGL3               --------->ATHB12       <------------ATHB5                 <----------DOF2    <------MYB83           <---------ICU4      <---------ATHB12----------->GT1  ------->TEIL        <--------P          --------->AHL20(2) ---->YAB1     <---------ANAC58       <---------CCA1(2)   <-------GAMYB        <---------AHL20(2) <--   gtagcccaataactgggccttgtcttgttatatgggccttgaatctttagctttaaatggggttggatttgaaaccagtattttattcattgcttacgat  2803400                                        --------->AHL20(2)                                        <---------AHL20(2)                                       <---------AHL20(2)                            --------->ATHB51                            --------->YAB1                            <---------ICU4                   <---------------AGL15                  -                            <--------HAHB4                   --------------->AGL15         <---------HSFB2a(2)                           --------->ICU4                   ----------------->AGL1         --------->HSFB2a(2)            --------->TOE1(3)      <---------AHL20(2)       ----------------->AGL3     ------>MYB83 -            --------->TOE2(3) <---------YAB1                ----------------->AGL2     ------>MYB46(1)    ----------->GT1        <---------YAB1            <---------YAB1                   <---------ALFIN1 --YAB1---------->DOF2--------->ANAC46 --------->AHL20(2) <---------WRKY18(1)        ------->GAMYB  - -------AHL20(2) --------->ZAT6<---------AHL20(2) <---------ATHB12---------->DOF2 <-----------GT1   -   ttaaaatggtaaagccttaactctccaccattattatttgattaaattccaaatgatgtttgaccaaaaaaagaaaacttcaaataacccactctagaaa  2803500                                                                                              -------                                                                        --------->YAB1      ---------                                                                   --------->At5g28300      <--------            <---------TOE2(3)                                     ----------->GT1    ------->GAMYB          <---------AHL20(2)                                     --------->ZAT6     --------->MYB46(3)       <---------AHL20(2)                                    <----------DOF2        <---------MYB55(2)      --------->AHL20(2)      <-------TEIL                  <---------ICU4         --------->ANAC58 -------->ANAC58  <---------ANAC58        --------->YAB1  --------->GLK1(2)        --------->ANAC58 -------->ANAC46  <---------ANAC46       <---------ATHB12 --------->ARR11(3)       ------>MYB46(1) -------->bZIP60(2) ------>ZmHOX2a(1)   ------>MYB83      <---------ARR11(3)       -------->P<-------GAMYB -------->ANAC58  <---------ANAC58      ------>MYB46(1)   <-----------ARR10        ------>MYB83   ccaagtcattaaataatgtttcctgtgtaaaattcatggaccaatcgaaatgcagaagaaaatctttacagtaattagaatggccaaccaaagtttgttg  2803600                                                                    --------------->AtSPL8                                                            >>>>>>>>>E2Fc                                                            >>>>>>>>>E2Fd                                                           ------>NtERF2                                                           --------->LBD16                                                          ------->GAMYB                                                          --------->ANAC46                                                          --------->ANAC58                               <---------ARR11(3)         --------->ANAC58      <---------ARR11(3)                               --------->ARR11(3)        <---------MYB55(2)     --------->ARR11(3) --->ID1           --------->MYB46(3)           <---------AtLEC2    <---------------AtSPL8     ------ >MYB52(2)      <---------WRKY12    <---------AHL20(2)   --------->MYB46(3)    --------->CCA1(1) -MYB46(3)      <---------WRKY38(1) --------->AHL20(2)<---------ALFIN1         --------->RVE1(1)   tttttgtttttgtttttgtcaacgactcaagatgatatttatttgtgtttacatgaacacccgccaaaaatatgtactaaaatatctatttcaaatatgg  2803700  Previous    Next  AGI:  At5g08630.1    Description:  DDT domain-containing protein. similar to peptidase M50 family protein / sterol-regulatory element binding protein (SREBP) site 2 protease family protein [Arabidopsis thaliana] (TAIR:AT5G35210.1); similar to peptidase M50 family protein / sterol-regulatory element binding protein (SREBP) site 2 protease family protein [Arabidopsis thaliana] (TAIR:AT5G35210.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO71613.1); contains InterPro domain DDT (InterPro:IPR004022); contains InterPro domain WSTF/Acf1/Cbp146 (InterPro:IPR013136) Range:  from: 2798282    to: 2803172    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version