Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                                                -----                                                                                                -----                                                                                             <------NtERF2                                                                                            ---------                          <---------RVE1(1)                                                 ------>NtERF2                          <---------CCA1(1)                                                 <--------                         --------->ARR11(3)                                                 ---------                        <------ZmHOX2a(1)                                                  <---------ANAC46                    ---------->DOF2                               --------->ANAC58         --------->LBD16             <---------AHL20(2)                                   --------->ANAC58        --------->ATERF1(1)           <---------RVE1(1)                                    ---------->DOF2           <------NtERF2           <---------CCA1(1)                                --------->ANAC58             ------>NtERF2          --------->ARR11(3)                                --------->ANAC58            <---------ATERF1(2)          <---------ARR11(3)       <-----------GT1       <---------ZAT14                --------->ATERF1(2)          <---------GLK1(2)     <----------DOF2          <---------ZAT18                --------->DEAR3(1)        ----------->ARR10<---------ARR11(3)              --------->ZAT14               <---------RAP2.6(2)     --------->DEAR3(1)----------->GT1              <---------At4g35610    <----------DOF2<---------LBD16   cacagagccgaagatttttttaaaaaggatatttcttttaccaattgaaactgaagcagagcacgaagaagcaaacccttttggattttgccgccgggaa  2732800                                                                             <---------TOE1(2)                                                                             <---------TOE2(2)                                                                      <---------MYB52(1)                                                                 <-----------GT1  <---------AHL20(2)                                         --------->AHL20(2) --------->ICU4                                              <---------AHL20(2) ------>GT1                                                 <---------AHL20(1) ---->ANAC58                                                <---------AHL20(2) ---->ANAC58            <----------DOF2                     --------->AHL20(1)           *TSS >LBD16         --------->ARR14(2)                          --------->AHL20(2)          <----------DOF2 -HSFB2a(2)     <---------ARR14(2)              --------->At4g35610 <---------ANAC58    ------------- >HSFB2a(2)     <---------GLK1(2)               <---------At4g35610 <---------ANAC58    <---------DAG2   gtaataaatggcaaactggattcggacttttgcctctctctgagtttctctgatgagtctaatttattttccgttctccttggtttgctactttattttg  2732900                                                                                          --------->ARR14(2)                                                                                          <---------ARR14(2)                                                                                   <------------CBF                                                                                  <---------AHL20(2)                                                                        <---------TOE1(3) <---------MYB52(1)                                                                        <---------TOE2(3)<-------GAMYB                       <---------ICU4            <---------ZAT18        --------->MYB59  <---------RAP2.6(3)                ----------->GT1   <-----------HVH21       --------->ANAC46        <---------ICU4       <---------AHL20(2)   <---------ANAC58  <---------ANAC58   ------------>CBF --------->ATHB12 -->AGL15   <-----------GT1 <---------ANAC58  <---------ANAC58  --------->ANAC46 <---------AHL20(2)   gacaaatgtttatttttcgcgttaatatttgcttcttgtcacagaccgtcgtgctcttacaagtctccacaatttaggttttatttattgccgttatgcc  2733000                                                         <---------TOE1(2)                                                         <---------TOE2(2)                   <-------                                                       --------->TOE1(2)           --------->AHL20(2)                                          <---------AHL20(2)            ---------->ID1       --------                                          --------->ATHB12        <---------ARR11(3)       <---------                                         --------->AHL20(2)       --------->ARR11(3)<---------AHL20(2)                                         <---------AHL20(2)  --------->CCA1(2)     <---------AHL20(1)                          --------->TOE2(3) <---------WOX13(1)    <---------GLK1(2)<---------AHL20(2)                    <---------DAG2    <---------------AGL15 --------->ARR11(3) <---------AHL20(2)----                    <----------DOF2   --------------->AGL15<------ZmHOX2a(1)   --------->AHL20(2)----   ctcatacttattcaatctctcactttttccataaaactttctattaattgaattgttcataggatatagattttgtcgtttttaattttttttatacagt  2733100           --------->At4g35610                                   <---------AHL20(2)          --------->MYB52(1)                                    <---------AHL20(2)          <---------DOF5.7(2)                                   --------->AHL20(2)         <---------WRKY12                                --------->AHL20(2)         <---------WRKY38(1)                             <---------AHL20(2)     --------->DAG2                                     --------->AHL20(2)    ---------->DOF2                                   --------->YAB1  --------->YAB1                                    --------->AHL20(2)  --------->AHL20(2)                       --------->ANAC58  --------->AHL20(2) --------AtSPL8                            ----------->GT1  <---------AHL20(2)                     -- ------->AtSPL8        <---------At4g35610 --------->ANAC58 --------->AHL20(2)                     <- --GT1   <---------WRKY45     --------->AHL20(2) --------->AHL20(1)                                <- -------->CBF------->GAMYB    <---------AHL20(2) --------->AHL20(2)                 <---------CCA1(2) ----->ZAT14--------->ANAC46 --------->AHL20(2)  <---------AHL20(2)           <------ZmHOX2a(1)  <---   acaataaaaagtcaacggaaaacagagctcattaaattcactgagacgaaataaaataataaataaataaatcgaaggaaggagtcatatcaccttggta  2733200          --------->ANAC46          --------->ANAC58                                     <---------ANAC46          --------->ANAC58                                     <---------ANAC58    --------->ARR11(3)                                         <---------ANAC58    <---------ARR11(3)                                   <---------YAB1   <---------CCA1(2)      ----------->GT1              --------->YAB1 ------->AHL20(2)     <---------YAB1                  --------->ICU4           --------->TOE2(3) --------AHL20(2)   --------->YAB1                    <---------YAB1         <---------ATHB12 ----------TBP      <---------AtLEC2               --------->ICU4--------->AtLEC2 --------TBP      --------->AtLEC2          ---------->DOF2   <-----------------------TaNAC69(2)   tttatatatctcaagcgaccatgcatgatagtgaaatattcaagtttaaagacatgatgatgatgtcttgcacagttcaaacattagtacttgttccatg  2733300                                                            ------>NtERF2                                                            --------->LBD16                                                           <---------LBD16                                                          <---------LBD16                        ----                                                     --------->ICU4                           -------                        --------->ALFIN1         <------NtERF2                            <---------MYB46(3)                      <---------DEAR3(2)        ------>NtERF2                          <---------ANAC46                  --------->ANAC46            --------->RAP2.6(3)                     <---------AtMYB61  <---------HSFB2a(2)<---------DEAR3(1)      <---------ATERF1(1)                    <----------DOF2  --------->HSFB2a(2)<---------ATERF1(2)    ----------->HVH21                    --------->GLK1(2)   gtttctagtagtatttgtactcgccggtggagaagactcatccgagacgacggcaatgtttccggcgatgtttgtgttcggagactctttggtggataac  2733400                                                                               <-----------HVH21                                                                               <---------MYB52(1)                                                                           ------>MYB83                                                                           ------>MYB46(1)                                                                           -------->P                                                                           --------->MYB52(1)                                                                          --------->MYB55(1)                                                                          --------->MYB52(1)                                                                         <---------MYB55(2)                                                                         --------->MYB46(3)                                                                         --------->AtMYB61                                                                         ------->GAMYB                                                    <------NtERF2       <---------MYB55(2)                                               --------->ANAC58         --------->MYB46(3)                                               --------->ANAC46         <---------MYB52(2)                                               --------->ANAC55(2)     -------->P                            <------MYB83       --------->ANAC58        --------->ANAC58        --------->MYB46(3)  <------MYB46(1)   --------->SPL7           --------->ANAC58      ------->GAMYB      --------->YAB1       --------->MYB59    --------->RAP2.6(3)     --------->WOX13(1)   --------->RAP2.6(3) --->GAMYB              <---------STY1(2)    --------->MYB52(1)   --------->GLK1(1)       --------->MYB52(1) -->MYB52(1)            --------->STY1(2)   <---------SPL7        <---------GLK1(1)    --------->HSFB2a(2)   ggaaacaataaccacttgaactcactggctaggtccaactatctcccttacggcatcgatttcgctggaaatcaaccaaccggtcgcttctctaacggca  2733500                                                                                 --------->AHL20(2)                                                                                 <---------AHL20(2)                                                                                --------->AHL20(1)                                                                                <---------AHL20(2)                                                                         --------->YAB1                                               <-------TEIL            --------->AtLEC2                                              --------->AtLEC2       <---------ANAC58                                 --------->MYB52(1)                  <---------ANAC58                                 <---------ARR14(2)  <------MYB83   --------->ZAT14                            <-----------GT1<---------REM1(2)    <---------ICU4  --------->AHL20(2)                    <-------TEIL --------->ARR14(2)  <------MYB46(1)<---------ZAT18                <-             --------->ATHB12 --------->ANAC55(2)------->TEIL<---------GLK1(1)  <---------AHL20(1)<--   aaactatcgtcgatttcattggtacatattttacatatcggtctctacatgcatttggttttgaaatcagtgcatgcataaatttaatttgcacaagaga  2733600                                                                           --------->ATHB12                                                                           <---------ICU4                                                                          <---------YAB1                                                                         --------->ARR11(3)                                                                     --------->YAB1                                                                   <-----------GT1                                                              --------->AHL20(1)                                                              --------->AHL20(2)                                                              <---------AHL20(1)               <-----                                                          <---------AHL20(1)                  <------MYB83          <---------DAG2                                  --------->AHL20(2)                  <------       <-----------GT1          <---------AHL20(2)        <---------AHL20(2)                  <------MYB46(1)    <----------DOF2             --------->AHL20(2)        --------->AHL20(1)             --------->ALFIN1 ----------GT1 <------------------------ANAC81         --------->WOX13(1)<---------ARR11(3)  <------- -----TEIL<----------DOF2----------->GT1          <--------P  <---------AHL20(2)      ------->TEIL <-   ttcacccttttactttttttttttgttttgttaattttttagtttgttttgggttagcaattaattaattaacatgatcatggggatggatgtggatggt  2733700  Previous    Next  AGI:  At5g08450.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO67090.1); contains InterPro domain Histone deacetylation protein Rxt3 (InterPro:IPR013951) Range:  from: 2727822    to: 2732889    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g08460.1    Description:  GDSL-motif lipase/hydrolase family protein. similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT1G71250.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67098.1); contains InterPro domain Lipase, GDSL; (InterPro:IPR001087) Range:  from: 2733221    to: 2735456    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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