Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--                                                                                                 <---             ----------->GT1     <---------At4g35610                                        ---------    ------------------------>ANAC81      <---------ZAT6                                     <--------   --------->ZAT14       <------ZmHOX2a(1)        --------->TOE2(3)                        <---------ATHB12   <---------ZAT14   ---------->DOF2--------->MYB52(1)                                   --------->WOX13(1) -----DOF2 ---------->DOF2       --------->At4g35610        --------->ANAC46  <---------MYB52(1) <---   ttcagtaaacagcaaaagaaaaaaaaaggatgtgaagctaacagtgttatgaccttagttagactccacgagtatgaacagtttgttttatcagtcattg  2720300                                 <---------TOE2(3)                               --------->ATHB51                               --------->YAB1                               <---------ICU4                              <---------ATHB51                              --------->ICU4                              <---------ATHB12                           <---------------AGL15                                      <---------ICU4                           --------------->AGL15                                     <---------YAB1                          <-----------------AGL2                                   <---------ICU4                          ----------------->AGL2                                   --------->ATHB12                          <-----------------AGL1                                  --------->ICU4                          ----------------->AGL1                                  <---------YAB1                          <-----------------AGL3                             <---------ANAC58         <---------ANAC58 ----------------->AG                               <---------ANAC58 --------DOF2           <-----------GT1                                    <---------YAB1 ------ANAC58      --------->AHL20(2)                                    --------->YAB1   --------->ZAT18 >ATHB12 <---------ANAC58 <-----------------AG                           <---------ICU4   <---------ZAT14 -ICU4   <---------ANAC46 ----------------->AGL3        ----------->GT1 <---------ATHB51  --------->ZAT14 ------ANAC58      <---------AHL20(2)      ---------->DOF2              <---------ATHB12  <---------ZAT18   cttttgcagtttcttgtctaaatatttatccaattatggaaaactaaaaggagattaatggaaaaactaatccaattatgcttgatgattagtacacaat  2720400                                                  <------ZmHOX2a(1)                                            <---------TOE2(3)              <---------ARR11(3)                                           ---------->DOF2         <---------YAB1                                       <---------MYB46(3)       --------->ICU4            --------->GLK1(2)                                    <---------ANAC46          ----------->GT1 --------->CCA1(2)                     ----------->GT1<---------ANAC58      <---------AHL20(2)--------->CCA1(2)                  <---------AtMYB61 <---------ANAC58     --------->AHL20(2)--------->ARR11(3)    <---   gagtgttttccaaataagcttaggtgttaattttgttttcgtggttaaagtaggatatataaaatagttattagaaagatatatgagagaagaatcgaac  2720500                                                                                                 ----                                                                                                 ----                                                                                                -----                                                                                                -----                                                                                             --------                                                                                           --------->YAB1                                                                                           <---------ICU4                                                                                          <---------YAB1                                                                                     ----------->GT1                <-----------GT1                                                      <---------ZAT6 <             <---------ICU4                                                        <---------ANAC46 -             --------->YAB1                                                  <---------AHL20(2) <----             <--------HAHB4                           --------->YAB1        <---------AHL20(1)<------      --------->ARR11(3)                              <---------ICU4        <---------AHL20(2)-------      <---------ARR11(3)                              <--------HAHB4        --------->AHL20(2)-------    ----------->ARR10 <--------P                     <---------YAB1      --------->YAB1 --------->YAB1 -------DOF2<---------YAB1    --------->AHL20(2)  <---------YAB1        --------->AHL20(2)--------->ICU4   tttagtaagatactataattacaggttgccaaaaaaataagaaatataagttactataattacagaaaaaacaaataataaaatttagtgtaataataat  2720600    --------->AHL20(2)    <---------AHL20(2)                     --------->YAB1   --------->AHL20(2)                   --------->ATHB12   <---------AHL20(1)                   <--------ATHB1   <---------AHL20(2)                   --------->ATHB51 ---->HAHB4                             <--------HAHB4 ----->YAB1                             --------->YAB1 ------>GT1                             -------->HAHB4 ---->ICU4       <---------ICU4         <---------ICU4 ->ICU4          --------->YAB1        --------->AHL20(2) ---------AHL20(2)                     <---------ATHB51                                  <-----------HVH21 -------->AHL20(2)  --------->YAB1     <---------YAB1                                   <---------bZIP60(1) -----YAB1      <---------ATHB12       --------->ICU4                                   --------->bZIP60(1) ---ICU4        --------->ICU4       --------->YAB1           ----------->GT1--------->ANAC58       - -->YAB1        <---------ATHB51  --------->TOE2(3)         ---------->DOF2  --------->ANAC58      -- ->HAHB4    ------------>CBF      <----------DOF2 <------------CBF    *TSS --------->GLK1(1)       <-   gataaattatttaagacaataatgagaagaaaacaactttaataattagaagaattggaaccaaaagaaaaaatgagaaacccaattctgaggtcacaac  2720700                                        --------->ANAC58                      <---------YAB1                                        --------->ANAC58                <---------ANAC58                                    >>>>>>>>>TBF1                       <---------ANAC46                                 >>>>>>>>>TBF1                          <---------ANAC58                              >>>>>>>>>TBF1                       <---------AHL20(2) -------->LBD16         <---------HSFB2a(2)          <-----------GT1  <---------AHL20(2) ------->HSFB2a(2)      <---------------AGL15    <----------DOF2 <---------YAB1                    <- --------HSFB2a(2)      --------->HSFB2a(2) ---------->DOF2     --------->AHL20(2)                <--   tccagaagaaaaactgagagagtttgctcgaagaagaagaagaagcaaaagctttttaaaatccatttttattttcttgtatgattccaaacttatcttc  2720800                                                                                                 ----                                                                                                -----                                                                                      <---------HSFC1(2)                                                                                      --------->HSFB2a(1)                                                                                      <---------HSFB2a(1)                          --------->TOE2(3)                                      --------->HSFB2a(2)                          --------->YAB1                                         <---------HSFB2a(2)          --------->WOX13(1)                                                  --------->ARR11(3)<----    <----------DOF2    <----------DOF2                                       <---------GLK1(1) <----- --------ICU4--------->YAB1           <---------ZAT2                    <-------GAMYB --------->HSFC1(2) -------YAB1<---------ATHB12          --------->ZAT2  <---------YAB1   <---------ANAC46       <------   atcattctttctcaatcataccattctttcttaatctccaagctcgtattctatttcttattcgatgtttatttcgttgaaatctcgaagcttctcttcg  2720900                  <------MYB46(1)                  ----------->GT1                  <---------MYB46(3)                                <---------ANAC58     <---------MYB59                                                <---------ANAC46         --------     --------->TOE2(3)                   --------->ARR11(3)         <---------ANAC55(1)      <-------    <---------ANAC55(2)  --------->ANAC46<---------ARR11(3)         <---------ANAC58         -------- ------->GT1  <---------MYB46(3)       ----------->ARR10 <---------RAP2.6(3)                 <------- ---->HSFB2a(2)   <------MYB83     <---------At4g35610   <------NtERF2                      <-------- -----HSFB2a(2) <---------WOX13(1) --------->At4g35610  --------->RAP2.6(2)             --------->HSFB2a(2) ----ANAC46   --------->ATHB12   <-----------RAV1(2)   ----------------->AGL1           <---------HSFB2a(2) ---LBD16    <---------YAB1---------->DOF2--------->GLK1(2)        <------NtERF2    <---------GLK1(2)   ggtaatacctaaatgttgattggttactcgaaagcccagatgagattttgagagtaggccgaaattggagccgtgtttttggttcagtttctcgagggtt  2721000         <---------ANAC58         <---------ANAC58        <-------TEIL      <---------ARR14(2)                        --------->ICU4      <---------GLK1(2)                    ------->GAMYB      --------->ARR14(2)                --------->MYB52(1)  <---------LBD16                      <---------WRKY12                            <---------PCF2 ->HSFC1(2)                     --------->ARR14(2)                              --------->ALFIN1 --HSFC1(2)                     --------->GLK1(2)         <---------ANAC58 --------->HSFB2a(2) ->HSFB2a(1)    <----------DOF2 <---------ARR14(2)  <------ZmHOX2a(1)    <---------LBD16         ---- --HSFB2a(1)  <---------At4g35610      <---------WRKY38(1)<---------ANAC58<---------LBD16    -------- -TOE1(2)<---------ANAC46  ----------->GT1--------->MYB46(3)    ------>NtERF2 --------->ALFIN1 ------   cgatttcggattcgtgagcttttggggactggagaatatggacaacggccatgaggaaagacttgccgagaggttttcgggagtgggactcggagaatca  2721100                                                                                   <---------At4g35610                                                                               --------->ANAC58                                                                               --------->ANAC58                                                                               --------->ANAC46                                                                              --------->WOX13(1)                                                                             ---------->DOF2                                                                       =========================RAV                                                                       ----------->RAV1(1)                                                                       --------->RAP2.6(2)                                                                    --------->ANAC58                                                                    --------->ANAC46                                                                    --------->ANAC58<-----------RAV1(2)                                                                  --------->At4g35610                                <---------ANAC58               --------->At4g35610 --------->At4g35610 ------->RAV1(2)                <---------ANAC46        <---------REM1(1)   <---------ATHB12 ->GLK1(2)        --------->TOE2(3)           <---------YAB1  ----------->RAV1(1)  <---------ZAT2  -- --->YAB1        ----------->GT1<---------ANAC58---------->DOF2<---------At4g35610 --------->ZAT2 <--   tctggttcccatgaaaacgacgttaaaaacgatagcttgtttcaagttatcaaagctgttgaagcagcagaagccacaatcaagcagcaggtttgtgttc  2721200  Previous    Next  AGI:  At5g08430.1    Description:  SWIB complex BAF60b domain-containing protein / plus-3 domain-containing protein / GYF domain-containing protein. Identical to Uncharacterized protein At5g08430 [Arabidopsis Thaliana] (GB:Q9FT92); similar to zinc finger (C3HC4 type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G63700.1); similar to hypothetical protein OsJ_017826 [Oryza sativa (japonica cultivar-group)] (GB:EAZ34343.1); similar to hypothetical protein OsI_019323 [Oryza sativa (indica cultivar-group)] (GB:EAY98090.1); similar to Os01g0884500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045018.1); contains InterPro domain Plus-3 (InterPro:IPR004343); contain Range:  from: 2716701    to: 2720213    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g08440.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G23490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67077.1) Range:  from: 2720670    to: 2727168    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version