Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              --------->ZAT14                                                                            <---------ZAT14       <--                                                                         <---------At4g35610     <---                                                                         <---------ZAT2       -------               ------->TEIL                                              ----------->RAV1(2)  <------         <---------AHL20(2)                                              --------->ZAT2    <------ZmHOX2a(2)     <---------AHL20(2)                        ---------->DOF2           --------->At4g35610---------     --------->AHL20(2)               --------------->AGL15            <-----------RAV1(2)--------->ARR11(3) ------->AHL20(2)                  <-----------GT1                    <---------At4g35610 <---------ARR11(3) --------AHL20(2)  <---------TOE2(2) ----------------->AGL1    --------->ATHB12          <---------At4g35610   attatatataatttaagtacctatgttgatatacttgtaacctattgcagaaagaccacttgaaaccattgcatcagctgcagtgaaactcagatcatta  2693100                               <---------GLK1(2)                   <---------MYB52(1)    <----------DOF2            --------->ARR14(2)                 <---------MYB52(1) -------ZAT6                 ----------->ARR10                --------->MYB52(1) ------YAB1         <---------ATHB12                         <-----------GT1                   <----- -->ICU4          --------->WOX13(1) <----------DOF2        --------->MYB46(3)           --------->YAB1 ---YAB1        <---------ATHB12    <---------ANAC58      --------->YAB1             --------->ATHB12 >ATHB12      --------->WOX13(1)    <---------ANAC58--------->GLK1(2)--------->MYB52(2)<---------WOX13(1)   gtattacttttactatcaatcaatcttgcattagatttgctttctatagagtagaatcagtaatcaccggtttgtttgataagggtttcattgatattac  2693200                                       <---------------AGL15                                       --------------->AGL15               <---------MYB46(3)      --------->YAB1--------->ARR11(3)             --------->ZAT2            --------->TOE1(3)             <---------ZAT2            --------->TOE2(3)             <---------At4g35610      ----------------->AG      <---------ICU4                  ----------------->AGL1      --------->ATHB12                ----------------->AGL2      -------->HAHB4                  <-----------------AG     <---------YAB1                   ----------------->AGL3      --------->ANAC58     --------->ICU4   <---------At4g35610     ----------->GT1     --------->ANAC58 ----ZAT14   --------->At4g35610      <-----------------AGL1   --------->WRKY18(1)   actgaaaatgattccagctgttccatctgatcagagagtaaccataagaggtaaataacttgagagtcaaggaaatagaaattcaaaaaaaaaaaacaat  2693300                     <------ZmHOX2a(1)          --------->ANAC58          --------->ANAC58      ======================HOX2a_HOX2a      ------>ZmHOX2a(2)                                                  --------->WOX13(1)         -    <---------ARR14(2)             <-------TEIL                        --------->At4g35610          <   gaaggggatcgaaccccatttgaggagagagagcaagtccattgttcatcaacattcgactctgaaacccatcagcaatctgagtcagagttatagtcag  2693400             --------->YAB1           ------->TEIL        <---------ATHB12                                <-----------GT1   --------->ANAC46                       <---------WOX13(1)      --------------->AGL15   --------->ANAC58                      <---------ANAC58        <-----------------AGL1   --------->ANAC58                      <---------ANAC58 <---------ANAC58 -------->ZAT14                          <---------ANAC46 <---------ANAC58 ---------ZAT14    <------ZmHOX2a(1)--------->ATHB12<----------DOF2   agtgaacgcaatgaatcttaaggagaaactaagaagaaccattgcttgatcaagcttttttcttgtttccttcaatggctataaacagattgagagagag  2693500                                                                                                    -                                                         --------->ALFIN1                           -                                                     --------->ZAT2   <---------MYB52(1)            -                               <---------AHL20(2)    <---------At4g35610                          <--                              --------->ICU4         --------->At4g35610                       ------                            --------->YAB1           <---------ZAT2   <---------ARR14(2)       ------                         ----------->GT1        --------->ALFIN1      --------->ARR14(2)     --------                       <---------ANAC58   <-------GAMYB--------->ALFIN1                      --------                       <---------ANAC58  <---------MYB46(3)  --------->ARR11(3)              --------                       <---------ANAC46*TSS   <---------ANAC46<------ZmHOX2a(2)<-----------TBP ------   <-------TEIL   <---------ICU4 <---------TOE2(3) <---------PCF2    <---------RAP2.6(3)     <-------   agaggttcaagaaaaatcaaaaatggcctgtaataaatgttgatggttaagtgggagctgtgggatcatgccgatatttgtatatatacacacacacaca  2693600      <---------ZAT6 -------->ANAC46 -------->ANAC58 -------->ANAC58 -------ALFIN1 --->ANAC46 --->ANAC58 ->ANAC58                               <------MYB46(1) ->ANAC46                               <------MYB83           <---------AHL20(2) ->ANAC58                              <---------MYB46(3)  <---------DAG2                           - --->ANAC58                      <---------ATHB12 <-------GAMYB--------->AHL20(2)  <---------AHL20(2) --ALFIN1       <---------MYB52(1)    --------->ALFIN1     <----------DOF2<-----------GT1       <----   ccacggtactgtgactctcttagttgtctctccaaatcaagtgggtcgttttcgttgtcaactttttaatttcatttttctatgtttattttcagattta  2693700           --------->GLK1(1)                    ----------->GT1           --------->CCA1(2)                 --------->DAG2          --------->ARR14(2)           --------->ANAC58          <---------ARR14(2)           <---------ANAC46      <---------LBD16              <-----------HVH21                         <-------GAMYB     --------->MYB52(1)       ---------->ID1---------->DOF2                 --------->MYB111(2)   <----------DOF2--------->ARR11(3)   --------->ANAC58                     <---------MYB46(3)    --- ------>TEIL      <---------ARR14(2)----------->TGA1             ---------->DOF2            <-------- -----TOE2(3)     <---------ARR11(3)----------->HVH21      ----------->GT1 <--------P       ---------   tgtagcttcacggatatggagatattgtatttgtctctgtgacgcaaaaagtgtaaaaagattgagaaaaagaagaggttgttaactgtgtaagacgtat  2693800                                                                    <---------MYB46(3)                                               <---------YAB1       ----------->GT1  ----------->GT1                                              --------->AHL20(2)--------->ATHB51     <---------ANAC58                                   <---------WOX13(1)           -------->ATHB1       <---------ANAC46          <---------YAB1       <------NtERF2  <---------AHL20(2)--------->ATHB12     <---------ANAC58 ------>YAB1                   <---------At4g35610             <---------YAB1--------->ANAC58 -ANAC55(2)             ---------->DOF2     <---------YAB1     --------->ICU4--------->ANAC46 >ANAC55(2)           <---------ZAT6  <---------TOE2(3)  ---------->DOF2     --------->ANAC58       <   tcataactaattctgataaaactagtgaaaggcagcgattgatgttattaatatagaacaaaagcattattggttatataagcaatggagtgaatcacta  2693900                                                                                --------->YAB1                                                    <---------AHL20(1)   <---------ICU4                                              --------->ANAC46  --------->ARR11(3)                                              --------->ANAC58  <---------ARR11(3)     <---------TOE2(2)        --------->LBD16 --------->ANAC58 --------->YAB1 ------->TEIL     <---------TOE1(2)       --------->ANAC46 --------->ANAC55(2)   --------->ICU4         <---------    --------->LBD16          --------->HSFB2a(2)    --------->AHL20(1)   --------->YAB1    ----------   <---------TOE2(1)         <---------HSFB2a(2)    --------->AHL20(2)  --------->ICU4    --------->ANAC58   <---------TOE1(1)        <---------LBD16   <---------ANAC55(2)   <---------YAB1   <---------ZAT6 -----------HVH21   --------->YAB1          <-----------GT1 ---------->DOF2<---------YAB1 --------->ANAC58   gaggtccgaggtttatgtccattcatagtctccggaatttagaaaattacgaaatattttagtaaagataatgaataatgaatcgtagtgatacacaatt  2694000  Previous    Next  AGI:  At5g08370.1    Description:  ATAGAL2 (ARABIDOPSIS THALIANA ALPHA-GALACTOSIDASE 2); alpha-galactosidase. similar to ATAGAL1 (ARABIDOPSIS THALIANA ALPHA-GALACTOSIDASE 1), alpha-galactosidase [Arabidopsis thaliana] (TAIR:AT5G08380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65987.1); contains InterPro domain Glycoside hydrolase, family 27; (InterPro:IPR002241); contains InterPro domain Glycoside hydrolase, clan GH-D; (InterPro:IPR000111); contains InterPro domain Aldolase-type TIM barrel; (InterPro:IPR013785) Range:  from: 2690880    to: 2693539    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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