Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <------NtERF2      <---------ZAT18      ------>NtERF2    --------->RAP2.3(1)                                                         <-----------HVH21   --------->LBD16                                                       --------->ZAT6    --------->RAP2.6(3)   <---------ATERF1(1)                                                <---------bZIP60(1) <---------ICU4   ------>NtERF2                                                      --------->bZIP60(1) --------->ATHB12  --------->DEAR3(1)                                                  <---------GLK1(1)  --------->ICU4  <---------DEAR3(1)                                                  --------->GLK1(1)  <---------YAB1 <------NtERF2                                                     <---------YAB1<---------MYB52(1) <---------LBD16                                                <---------ARR14(2)  --------->ANAC58 --------->ATERF1(1)                                            --------->ARR14(2)  --------->ANAC58 ---------ATERF1(1)                         ---------->ID1 --------->MYB52(1)   <---------RAP2.6(3) <   ggctccggcgcaatctctcacattattctctcacttcatttcttctgtccccttgccttcaaaacggttctgatatcagtaccgtcaagtcatgatggca  2661300                    --------->TOE1(2)                    --------->TOE2(2)                                              <----------DOF2                   --------->HSFB2a(1)                                    --------->GLK1(2)                   --------->HSFC1(2)                                    --------->ARR11(3)                   <---------HSFC1(2)                                    <---------GLK1(2)     ------              <---------HSFB2a(2)                    ------->TEIL        <---------ARR11(3)   <------              --------->HSFB2a(2)                 <---------YAB1<---------YAB1     <---------DAG2  <- ---------MYB46(3) <---------HSFB2a(1)         <---------AHL20(2)    ---------->DOF2         --------   agttgttgttgttgttttggaaccttcgtttagcactctcccaattgattttatgaatttcaattgatgaataaagattcttcaacttttagttatataa  2661400                             <---------MYB52(1)                     <-------MYC2                     ------->MYC2                     <-------MYC3                    --------->ANAC58                    --------->ANAC58  <--------ATHB1                   <---------TOE2(2)  <---------AHL20(2)                   ------->TEIL       --------->ATHB51      <-----------GT1------->MYC3     <---------ICU4   <----------DOF2 <---------TOE1(2)  --------->AHL20(2)                 <---------ATHB12  <---------AHL20(2) --->YAB1<---------DAG2     <-------GAMYB   --------->HSFB2a(2)      --------->MYB46(3)   --------->AHL20(2) ---AHL20(2)    --------->ANAC46     --------->ICU4            --------->YAB1             <---------AHL20(2) --------TOE2(3)--------->ANAC58   --------->YAB1              <---------ICU4           --------->TOE2(3) ->AHL20(2)     --------->ANAC58  <---------AHL20(2)          <---------ATHB12   <---------ZAT18   taaggcttttacctttctacgcacgtttttcgttgtttaataatttccagtatttcaattttcaataatcaacaaatcagtagtctacttcattaatttt  2661500                                     --------->AHL20(2)                                <---------YAB1                          --------->AHL20(2)                          <---------AHL20(2)           --------->ATERF1(1)                         --------->YAB1                --------->RAP2.6(3)                     <---------AHL20(2)               <---------ATERF1(1)    <---------AHL20(2)                     --------->AHL20(2)   <---------AHL20(1)                <---------AHL20(2)                     --------->AHL20(1)   --------->AHL20(1)                --------->AHL20(2)                    --------->AHL20(2)    <---------AHL20(2)               <---------YAB1       --------->YAB1<---------AHL20(1)   --------->AHL20(2)             --------->YAB1      <---------ATHB12<---------AHL20(2) --------->AHL20(2)     ---------->DOF2              --------   ggaactcaatgaaaattttcaaattaattttaatatgaatgaaataaattagggggagacggcccttaaggcccattataaatttagagggccattaagg  2661600                                                                                            <-------PIF5                                                                                           ----------                                                                            ------>ZmHOX2a(2)                                                                           <------ZmHOX2a(2)------->PIF5                                                                          --------->AGP1   --------->ZAT2                                                                          --------->ARR11(3)---------                            --------->ZAT2   --------->MYB52(2)          <---------GLK1(1) --------->At4g35610                            --------->At4g35610               <---------ATHB12    --------->At4g35610                            <---------At4g35610<---------MYB52(1)        --------->GLK1(1)------->TEIL                            <---------ZAT2  <-------TEIL      --------->MYB46(3)  <---------At4g35610                     <---------ATHB12    <---------ANAC58   --------->WOX13(1)    ----------->RAV1(2)     --------->ZAT6 <-----------HVH21    <---------ANAC46  *TSS     ---------->DOF2 ------->GAMYB  <- -->DOF2    --------->AHL20(2)           <---------ANAC58 ------------>CBF<---------ARR11(3)---------   cccattaacacaaattaaacccagtcatggagctgaggcagtagcgttcgtttttttggaatcaatcaccgaaagagatctttcaactgaagcacctgcg  2661700                                                                                                -----                                                <---------ANAC46                        --------->At4g35610                                 <------ZmHOX2a(1)        --------->YAB1              <-----------RAV1(2) ->RAV1(2)          <---------DEAR3(2)          <---------ANAC58                     <---------At4g35610 >TOE2(2)        <-----------HVH21----------->GT1 <-------GAMYB<---------YAB1        --------->At4g35610 ------TEIL     --------->ANAC46----------->GT1 <---------ANAC58     <----------DOF2 <---------ZAT2 >TOE1(2)    ------>NtERF2 --------->O2---------->DOF2   --------->ICU4 <---------LBD16 ----------->GT1   attcatcttcttctctgcccgtcgtttcaacgtgaggagaaaaaagaatggcgtttgcaaaaatgatgtttcttttcggaaaatttcagcaggtgaatat  2661800                                                                             --------->HSFC1(2)                                                                  <---------ANAC58                                                                  <------MYB83                                                 <---------ANAC58 <------MYB46(1)                                                 <---------ANAC46 <---------ANAC58                                                 <---------ANAC55(1)         <---------HSFC1(2)                                                 --------->ANAC55(2)         --------->HSFB2a(1)                                                 <---------ANAC55(2)       ---------->DOF2                                                 <---------ANAC58 <---------ANAC46                 --------->At4g35610            <-------TEIL     <---------MYB46(3)       <---------CCA1(2)          <---------HSFC1(2)             --------->MYB59   <---------ARR11(3)             --------->HSFC1(2)         <-----------RAV1(1)   --------->ARR11(3)     <---------YAB1      <---------MYB52(1)<---------ANAC46       <----------DOF2 ---->CCA1(2)    <---------At4g35610    ------>ZmHOX2a(1)   <---------TOE2(3)<---------HSFB2a(1)<----   atgaagttcttatcttctaatctgacttatttttgaaacttcctctctggtacgtgttttttgatgttgggtatgaagaaagttcgaggcttttcaaagg  2661900                                                                                                <----                                                                                   <---------WOX13(1)                                          <---------ANAC58                       --------->ATHB12           --------->At5g28300--------------->AGL15                              -------->HAHB4 -----      <---------REM1(2)       =======================================================================      <---------ZAT14         <---------------AGL15                             <---------YAB1 ------      --------->ZAT14   ------>ZmHOX2a(1) <---------ANAC46                      --------->ICU4 <----- --ZmHOX2a(1)    <---------YAB1           <---------ANAC58         --------------->AtSPL8  <---------YAB1   atttagtcttcactgtaatatgattcctgtgactatattttgtagcttgtatagacttcagaacatatgtgagtacttgaaaatgattgaattctcaatg  2662000                                                                                               <-----   <----------DOF2                                                                     <---------AHL20(2)  <---------ANAC58                                                                  <----------DOF2  <---------ANAC58----------->GT1                                                  <---------ANAC58 ----ATHB1 --------------->AGL15              -------->HAHB4                       <---------ANAC58 ---->ATHB12  --------->AHL20(2)              --------->YAB1             ----------->GT1    <-------- ==========================MADS_MADS         <---------YAB1              --------->YAB1--------->AHL20(2) --->ICU4 ----------------->AGL3           --------->YAB1       <---------YAB1<---------ARR14(2) ----ATHB12<---------------AGL15 <---------ANAC46             --------->YAB1  --------->ARR14(2)   <-   atttgctttctgtccataaaatgtaatttgaagttgctcatacgataataataggcattgtcaattttgattcaatggtgaatttgcttttaattttctt  2662100                                                                    <---------RAP2.6(3)               <---------HSFB2a(2)                                  ----------->RAV1(1)             -        <------MYB46(1)                               ------->GAMYB <---------DDF1                  <        <------MYB83                                --------->At4g35610                             <      <--------P               <----------DOF2      <---------At4g35610                            --     <-------GAMYB ---------->DOF2        --------->GLK1(2)         ------>NtERF2                  --    --------->ALFIN1  --------------->AtSPL8   --------->ANAC58    --------->RAP2.6(2)             -- -----DOF2     --------->HSFB2a(2) <---------------------WRI1      --------->DEAR3(1)              -- ---GT1<---------AtMYB61       <---------DAG2  --------->ANAC58   --------->DEAR3(2)              <-- --------LBD16 >>>>>>>ZML2  <---------ALFIN1   --------->ANAC46  <---------At4g35610   <---------YAB1   ttcagggtgttggtgttctagcaaagagtaccacttttgctaagaatccaaggcaactgcaatttgaagccgacattaacaaattgtttatgtttacaag  2662200  Previous    Next  AGI:  At5g08260.1    Description:  SCPL35 (serine carboxypeptidase-like 35); serine carboxypeptidase. Identical to Serine carboxypeptidase-like 35 precursor (SCPL35) [Arabidopsis Thaliana] (GB:Q9LEY1); similar to SCPL34, serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT5G23210.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42008.1); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563) Range:  from: 2657152    to: 2661417    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g08270.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G23200.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44430.1) Range:  from: 2661659    to: 2663628    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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