Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  --------->ATHB12                                              <---------WOX13(1)                                           <---------YAB1                                           <---------AHL20(2)                                          --------->AHL20(2)                                          <---------AHL20(2)                                   <---------TOE2(3)                                 <---------AHL20(2)                          <-------GAMYB                                <---------AHL20(1)                        <---------ANAC58                                <---------AHL20(2)                        <---------ANAC58  ---------->DOF2               --------->AHL20(2)               --------->ANAC46                   - ----MYB52(1)            ------->MYC3    --------->YAB1          --------->ANAC58              ------ -GAMYB    --------->ANAC46     --------->AHL20(1)               --------->ANAC58        <----------DOF2 ----RAV1(1)             <-------MYC3  ------->TEIL       --------->ZAT6  <---------ANAC46 <---------YAB1   gttttaaagctctacggtagtactacacatgtaatttaatgaattttaattgatttctaaacagtacgagcaatttgtgtgttgaattcaactttgatta  2656800                                         <---------TOE2(3)                                  --------------->AGL15                                         <----                                  <---------------AGL15         <---------AHL20(2)              -----                               --------->GLK1(2)        ---------->DOF2   <---------MYB52(1)   <----- ---------->GT1         <---------At4g35610      ---------->DOF2--------->AHL20(2)             ------ --->AHL20(2)           --------->At4g35610 >>>>>>>>>>GT-3b    --------->AHL20(2)<---------ALFIN1----   tatggtttataaaaccttgttttgggagatgaaattctgaattaagaaaaataaagaagaaagcatttaatttgccgatggctccatctccatagccatg  2656900                                                                                   <---------ATHB12                                                                                  ------>MYB83                                                          ----------->GT1         ------>MYB46(1)                                                         --------->DAG2           -------->P                    --------->At4g35610                ---------->DOF2          <---------MYB111(1) ---MYC3     --------->YAB1                        <---------------AGL15        --------->AtMYB61 -->MYC3    <---------ATHB12                       --------------->AGL15       --------->MYB46(3) ----O2     --------->ICU4                        <-----------------AGL3       --------->DEAR3(2) --->O2   <---------At4g35610                     <-----------------AGL2    --------->ZAT18 ----->ALFIN1<---------ICU4                    <----------DOF2              <---------ZAT18   tggttcagtctccgatgatgacatctcaagcgttgaaattcaattccatctttctgtaaaaggtgagaaaattggtagtgaaccaaccatgttatcggag  2657000                            <---------YAB1                 <-------MYC3                         <---------YAB1                    ------->MYC3                         --------->ICU4                   <---------TGA1a                       -------->HAHB4                     --------->O2                       <---------ICU4                     ===========================================                --------->ANAC58                          --------->ANAC55(2)              --------->AHL20(2)                --------->ANAC58                          --------->ANAC46   <---------ARR11(3)                --------->ANAC46                          <---------ANAC55(2)--------->ARR11(3)        <-------TEIL   --------->YAB1           <-----------GT1             --------->RVE1(1)      <------NtERF2   <---------YAB1        <---------YAB1===========================================  --------->REM1(2)   <---------ATHB12    ----------->GT1 <---------O2      --------->CCA1(1)     <-- --------->ALFIN1     --------->ICU4  <---------YAB1      --------->TGA1a --------->AHL20(2)---------   accgtggaggcacattacaaggaaatgattatgaaatgtgtttattgttataacattttcacgtgagtatcaaaaaaaaaatctcatgaaaaataaaaga  2657100                                                               --------->At4g35610                                                        <---------ARR14(2)                                                     <---------ANAC46                         <------                                                     <---------ANAC58                      ----------                                                     <---------ANAC58                --------->ATHB12   <---------TOE1(3)                                <------NtERF2                    -------->HAHB4   <---------TOE2(3)                                *TSS--------->ARR14(2)           --------->ATHB51  ---------->DOF2            ----------->GT1       ------>NtERF2                     <--------ATHB1 ==bZIP_DOF            ---------->DOF2            <---------RAP2.3(3)                <---------ICU4-- ==bZIP_DOF --------->AHL20(2)                 --------->ALFIN1<---------At4g35610  --------->AHL20(2) --------DOF2     ----------->TBP  --------->DAG2 <---------DEAR3(1)                <---------AHL20(2) ->DOF2     <---------AHL20(2)    ---------->DOF2 <---------PCF2                    <---------ATHB51   cttttaaagttttttttaatataaaaaaagacagtataaagtagaagaagtgggggcgttttctcatctgctcttcatttcgataaataattgaaaagaa  2657200                                                                                     ----------->RAV1(2)                                                                             --------->LBD16                                                                           <---------LBD16                                                                           --------->DEAR3(2) <------MYB83                                                 <----------DOF2          --------->MYB52(1)<--------P                                               ------->TEIL               <---------At5g28300 <------MYB46(1)             --------->CCA1(2)               --------->ZAT18             <-----------GT1 <---------AtMYB61   <----------ID1                            <---------ZAT18          <---------ZAT6 <---------ANAC58 ----ID1    <----------ID1                  --------->ANAC58   <----------DOF2       <---------ANAC58 >DOF2  ---------->DOF2                     --------->ANAC58 --------->ZAT14<---------ATERF1(2)    <- -------->DOF2     ---------->DOF2     >>>>>>>>>TBF1         <---------ZAT18--------->ATERF1(2)<-----   caaaagaaacaaaagagacgagaaagagttttggcgatgaagaagaacgcactttggctactgtgcattctggtgttaccggcgatagcctgtggtagga  2657300                                                                         --------->MYB52(1)                                                                        <---------ALFIN1            <                                                                        ------->GAMYB               <                                                                        --------->AtMYB61           -                                                                       <---------MYB55(2)          <-                                                                       <---------MYB52(2)          <-                                                                       --------->MYB46(3)         <--                                                                       <---------MYB111(2)        <--                                         <---------At4g35610          -------->P               ------                                         --------->At4g35610          ------>MYB46(1)          ------                                  <------ZmHOX2a(1)               ------>NtERF2               -------          ----------->GT1   <---------HSFB2a(2)                  --------->LBD16             <------- --------->LBD16            --------->HSFB2a(2)          <---------MYB52(1)                  -------- --------LBD16             <---------LBD16          <-----------GT1   ------>MYB83       --------->ZAT6 -ZmHOX2a(1)              ------>ZmHOX2a(1)  --------->ARR11(3)<---------LBD16<---------MYB52(1)<----   aaccggagaagaaggtaacaatttcatcctctgggaggaaggaagatgaccttgtaaccggtttgcccggccaaccaccggttaacttcaaacactacgc  2657400         ----------->RAV1(2)        --------->ARR14(2)       <---------CCA1(2)   <---------ANAC46   <---------O2   <---------ANAC58   <---------ANAC58   <---------ANAC55(2)   --------->ANAC55(2)   <---------ANAC55(1) ---------MYB52(1) ---------ARR14(2) -------->ARR14(2) ----------HVH21 ------GAMYB  <---------PCF2 -------MYB46(3) -------DEAR3(2)<---------ANAC46 >NtERF2--------->GLK1(2)             <----------DOF2 ------>AtMYB77------>NtERF2          <---------DAG2                                        ------>ZmHOX2a(1) -->ANAC46 <-----------RAV1(1)  --------->DAG2                                      ------>ZmHOX2a(1) --ZAT14<---------ARR14(2)--------->ANAC58                                      <---------SPL7  ----- ->ZAT14------->TEIL      --------->ANAC58                --------->At4g35610 ---------->ID1<-------- -----LBD16--------->ALFIN1   ---------->DOF2             <---------At4g35610XXXXXXXXXXXXXXXXXXXX>MIR858   cggttacgtgaatctggggcctgaacagaagcaaaaggcacttttctattggttcttcgaagctcaacaaaactcttctcgtcgtcctctcgtcctttgg  2657500                                                  <---------AHL20(2)                                                  --------->AHL20(2)                                                  <---------AHL20(1)                                          ----------->GT1                    <---------ICU4                      ------>ZmHOX2a(1)  --------->DAG2                      --------->ATHB12 ----->ID1  <---------GLK1(2)           ---------->DOF2                      --------->YAB1 --DOF2   --------->MYB52(2)       --------->AHL20(2)        ----------->GT1<---------YAB1        <--   ctcaatggaggtcagtttctcttcctctctcgctcatttacataaagtatattttatttgaagtagtaatacaaacttatcattgttctcaattggaatt  2657600                                                                <----------DOF2             <--------                                                       --------->ATHB12                <---------ICU4                                                      <---------YAB1                  <---------YAB1                     <---------LBD16           --------->YAB1  <---------DAG2         --------->ICU4       --------->HSFC1(2)           <---------YAB1<---------AHL20(2)             --------->bZIP60(1) -------YAB1         <---------At4g35610<-----------GT1--------->YAB1            <---------bZIP60(1)   ttcattcgaaacttcattgtttctgcggttttacaaatatgtttaccaattttaaaatgatagcaccttttttgaaacggatgatgtgatgattatgttt  2657700  Previous    Next  AGI:  At5g08260.1    Description:  SCPL35 (serine carboxypeptidase-like 35); serine carboxypeptidase. Identical to Serine carboxypeptidase-like 35 precursor (SCPL35) [Arabidopsis Thaliana] (GB:Q9LEY1); similar to SCPL34, serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT5G23210.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42008.1); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563) Range:  from: 2657152    to: 2661417    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version