Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              --------->ARR11(3)                                                                          <---------TOE2(3)                                                                  --------->ANAC58                                           --------->DAG2         --------->ANAC55(2)                           <-----------GT1---------->DOF2         --------->ANAC46           <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                     --------->ANAC58          <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                <---------DAG2<---------YAB1          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    ---------->DOF2<-----------GT1    <----------DOF2         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)----------->GT1 <----------DOF2 <---------ARR11(3)   <---         <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<-----------------------TaNAC69(2)<-----------GT1 ------>ZmHOX2a(1)   tgaaaatgtttttttttttttttttttttttgccaattcgacagaaaagtgaaaagtcacaactttttacgaaattaagatacctcttttgtttcctgat  2652000                 --------->LBD16                ------->GAMYB               <---------LBD16              --------->MYB52(1)              -------->P                                      --------->ARR14(2)            --------->MYB46(3)    ----------->GT1             <---------ARR14(2)        <---------YAB1          <------ZmHOX2a(2)       --------->ALFIN1    <----------DOF2   <---------ARR11(3)          <---------LBD16       --------->YAB1    <---------DAG2    --------->ARR11(3)       ------->TEIL  <---------GLK1(1)   <---------ANAC58   <---------AHL20(1)       <-----------HVH21       <---------YAB1               -   <---------ANAC58   --------->AHL20(1) --------->ANAC46    --------->GLK1(1)  <-------TEIL -------- ----TEIL--------->YAB1    <-----------GT1  <---------ANAC55(2)   <---------At4g35610        <-------   tcatggctttatcatcaaccggaatatttttacgatcagttatacgacgtatcacggagaggggtttctgcttatcatcagtttcatcttctactctcga  2652100                            <---------MYB46(3)                            <---------DEAR3(2)                          <------NtERF2                         ------------>AtMYB77                         <---------ATERF1(1)                         ------>NtERF2                        --------->DEAR3(1)                        <---------DEAR3(1)                        ----------->HVH21                     ------>ZmHOX2a(2)                                             --------->ARR14(1)                     <---------DEAR3(1)                                           <---------GLK1(2) <------MYB83      --------->ARR14(2)              <---------LBD16                --------->ARR14(2) <------MYB46(1)   <---------ARR14(2)           <-----------RAV1(2)               <---------ARR14(2) -------->MYB59 ------>ZmHOX2a(1) --------->ARR11(3)   --------->ARR14(2)   --------->DEAR3(1) ->HSFB2a(2)    ===========================HOX2a_HOX2a <---------ARR14(2)--------->AtMYB61 --HSFB2a(2)  <-----------------AGL1------>ZmHOX2a(2) <------NtERF2     --------->MYB46(3)  <<<<<<<<<TBF1   agtaggtttctctgtttcctcgatcggcgacggtttgatctcgctgttcttcaggcggaacttggaacacaaaaaccaccgagggattcgcttcttcttc  2652200                                                                                                -----                                                                                                =====                                                                                               ======                                                                                               <-----                                                                                               ------                                                                                =====================                                                                                =====================                                                                    --------->LBD16            ------                                                                   --------->ANAC46           -------                                                                --------->GLK1(2)             <------                                                                <---------ARR14(2)            -------                                           --------->ETT(1)     --------->ARR14(2)<---------GLK1(1)                --------->DEAR3(1)     <----------DOF2     --------->LBD16      <------ZmHOX2a(1)             --------->DEAR3(1)       <---------ANAC58   <---------HSFB2a(2) --------->LBD16  <------             <---------ALFIN1         <---------ANAC58   --------->HSFB2a(2)--------->DEAR3(1)-------             --------->AtMYB61   --------->MYB52(1)      <---------LBD16--------->MYB46(3)   <-------            --------->MYB46(3)  ------->GAMYB<------NtERF2--------->LBD16 --------->At4g35610<-------    <<<<<<<<<TBF1              --------->MYB46(3)       <---------LBD16---------->DOF2      ---------   atcttcttcttctcaccaccgtctcccttcgtaaccatcggcttgtcggagtatattttccgggagaatccgaaacagccgaggaaatacgaagaagatc  2652300        --------->TOE1(1)       --------->HSFB2a(2)       <---------HSFB2a(2)    ------>ZmHOX2a(1) ->ZmHOX2a(2) ==========HOX2a_HOX2a ==========HOX2a_HOX2a -ZmHOX2a(2) --->ARR14(1) ==HOX2a_HOX2a =HOX2a_HOX2a --->CCA1(2) -->ARR14(2) ---ARR11(3) -->ARR11(3) ---ARR14(2)                         <---------ANAC46 -->ARR11(1)                       <---------ZAT14                     --------->TOE1(2) --HSFB2a(1)                       --------->ZAT14          --------->ICU4 --GLK1(1)                  --------->ANAC46   ---------->DOF2        <---------ANAC58             *TSS -->ARR10      ----------------------->TaNAC69(2)  ---------->DOF2    <---------ANAC58         ------   cgagtccttctcggactctcttctctgttttcgccattgcagtggaattgaaagaaagagaaatgtttgcattcgtgcgaagactttgaaatatcgctca  2652400                                        --------->YAB1                                      --------->AHL20(2)                                     --------->YAB1                                   --------->AHL20(2)            <-----------GT1        <---------AHL20(2)      <---------ANAC46        <---------AHL20(2)                                                    -      <------MYB46(1)         --------->AHL20(2)                                 --------->YAB1     <      <------MYB83            <---------AHL20(1)                            <---------------------WRI1     <------MYB46(1)          --------->AHL20(1)                       <---------ARR14(2)           <     <------MYB83         --------->AHL20(2)                          <------ZmHOX2a(1)             -   <--------P     <----------DOF2 --------->YAB1                   <---------HSFB2a(2)           ----   <---------MYB52(1)    <---------AHL20(2)                        <---------LBD16        --------->At5g28300  <-------GAMYB ------>ZmHOX2a(1)<---------YAB1                    --------->HSFB2a(2)    <---------- <---------MYB46(3)   <---------AHL20(2)--------->AHL20(2)        <---------ANAC46       ----------->GT1 ---->CDC5 <-----------GT1<---------AHL20(2)           ----------->HVH21 --------->DEAR3(2)----------   gagcggttgggttttatcctctttttatttattttattaaaataatatttgtcactgttgacacagtttcgaggaatcgacgagaataacacggtgacat  2652500             <---------YAB1    <-----------GT1   <---------YAB1 <---------ICU4 --------->ATHB51                                                                  <---------AHL20(2) -------->ATHB1                                                                    --------->AHL20(2) -------->ICU4--------->YAB1                                              <---------YAB1 ---------AHL20(2)                                                       --------->AHL20(2) ---------ATHB51       --------->TOE1(2)                                 --------->AHL20(1) -------->AHL20(2)   --------->GLK1(2)                                 <---------AHL20(1) ----->AHL20(2)  --------->YAB1                                        --------->AHL20(1)     ------- -HVH21--------------->AGL15    <------ZmHOX2a(1)                   --------->AHL20(2) <-----------GT1 ->HVH21   --------->YAB1 ----------->HVH21 ------->TEIL   <---------CCA1(2)    <---------GLK1(2)  --   aaattattactacttataataagaaactgggacaggactgtatatgtatgtacaagaagttgtatccaaaaaaaatattatagaattttttacaagataa  2652600                                               ------->TEIL                                               <-------TEIL                                     <---------YAB1                                                <-     ----------->GT1              <---------TOE2(3)                                                <-     <----------ID1         ----------->GT1<---------------AtSPL8                                 <--    ----------->GT1   <------ZmHOX2a(1) <---------YAB1      <-----------GT1                    <----- -->CCA1(2)   ---------->DOF2    <-----------GT1   <---------TOE2(2)    <---------TOE2(3)--------->YAB1 ------->CCA1(2)   --------->CCA1(2)--------->TOE2(3)   <---------AHL20(2)    <---------AHL20(2)  ---   gatagaagggaaaaaaaaaagataggaagaaggtttaacattataaatgtacgtagatttattcacattttgttatggatttttttgactaacataagga  2652700                              --------->ARR11(3)                              <---------ARR11(3)                            <---------AHL20(2)                  -------->HAHB4                  --------->ATHB12           --------->DAG2  --------->AHL20(2)                                                      <-          ---------->DOF2  <---------AHL20(2)                                                   <---- --------RVE1(1)  <---------ICU4                        --------->AHL20(2)                ------>ZmHOX2a(1) --------CCA1(1)  --------->YAB1                    <---------AHL20(2)                   --------->TOE2(3) -------ARR11(3) <---------ATHB12                  --------->AHL20(2)                <----------DOF2 -ZmHOX2a(1)     <---------YAB1                    <---------AHL20(2)               <---------ANAC58 ------>ARR11(3) --------->ICU4             ----------->GT1     <---------AHL20(2)  <---------ANAC58<   gattttttgtaataaagtaatgattagaattaaatcttacatttagatgttaattttataaaatataaaaatccaatttctaagtttctttcctcaatat  2652800   <------MYB46(1)   <------MYB83  <---------MYB46(3)  --------->MYB59  <---------AtMYB61  --------->MYB111(1)                         <----------DOF2          <---------------AtSPL8 <--------P                                   <---------DAG2          --------->ZAT14     --------->CCA1(2) --------MYB46(3)               --------->TOE2(1)                 --------->DAG2         <---------ARR11(3) -------RAV1(1)                 --------->TOE1(1)                ---------->DOF2         --------->ARR11(3) -------GAMYB          <---------YAB1<----------DOF2        ------->TEIL      ----------->GT1       -   gtggttggtccagtttgtgggttttattatgccctcgtactttgatcacttttggcttcatgaaccaaaaagtatagtacatgttaaataagatatactt  2652900  Previous    Next  AGI:  At5g08240.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G23160.1) Range:  from: 2650838    to: 2652399    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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