Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           --------->WOX13(1)                      >>>>>>>>>MYB2                --------->ANAC58           ----------->HVH21          ===================================HOX2a_HOX2a                          ----------->GT1          ------>ZmHOX2a(2)                   ---------->DOF2                     <---------ZAT6         <------ZmHOX2a(2)            <------ZmHOX2a(1)                 <---------At4g35610        <---------ARR14(2)         <-----------RAV1(2)                  --------->At4g35610       <---------RAP2.6(3)      --------->ZAT18      --------->ICU4 --------->ANAC46 --------RAV1(2)--------->ANAC58--------->ZAT14 ----------->GT1     <---------ALFIN1 -->YAB1--------->ARR14(2)      <---------ZAT14--------->DAG2     ----------->RAV1(1)  ---------->DOF2 --ATHB12====================================HOX2a_HOX2a     --------->KAN4(2) --------->YAB1   caggctggccgatctgaaacggaaaaccaattagttcacaggagataataaagtcaaaatgaacaatcccacacagcttaatcagagttaaaagcacttc  2649400                                                                                             --------                                                                                            ---------                          <---------ARR11(3)        <---------YAB1                    --------->At4g35610                          --------->ARR11(3)     <---------YAB1                       <---------At4g35610   aaacaaattcaatgctctcaacataagagatactacatagcaataagctagatgattatactactggcttcaaatttcactcagtttcagcacaaaaaga  2649500                           ----------->RAV1(1)                         ------>MYB46(1)                        --------->ANAC46                                                    <------ZmHOX2a(1)   <----------DOF2     --------->TOE1(2)                                    --------->TOE1(3)  <---------ANAC58    =================RAV       <---------------------WRI1 --------->TOE2(3)  <---------ANAC58    ----------->RAV1(2) ------>ZmHOX2a(1)        --------->ARR14(2)    --------->YAB1 ->DAG2             <-----------GT1--------->AHL20(2)              <---------ARR14(2)   <---------ATHB12 ->DOF2    --------->YAB1------>MYB83    --------->TOE1(2)        <------ZmHOX2a(1)   --------->WOX13(1)   gattgctttggcatcatactataaacctgccacattataaaatcctactaagatgagacattcaaggaggaaacacagccttaaatgtcaatgaggagcc  2649600                                                                                                   ==                                                                                               ------                                                                                               <-----                                                                                           --------->ANAC58                             <-------TEIL                                                  --------->ANAC58                          --------->ATHB12                                              --------->ZAT2                         <---------YAB1                                                 <---------ZAT2                         --------->ICU4                                                --------->ANAC58                       <---------ICU4                                                  --------->AtLEC2                       --------->YAB1                                          --------->ZAT2  ------                      <---------YAB1                              <------ZmHOX2a(1)    --------->ANAC58                     <---------ARR11(3)                          --------->ANAC58 --------->ANAC58 <-                     --------->ARR11(3)   <---------ANAC58       --------->ANAC58 --------->ANAC58 --                    --------->YAB1        <---------ANAC58    --------->ZAT18  --------->At4g35610---   --------->ANAC58<---------YAB1     ---------->DOF2       --------->ZAT18--------->TOE2(3)  <------   --------->ANAC58--------->ICU4  ------->TEIL          ---------->DOF2   --------->TOE1(3)  -------   aaactaagccaaacaaaaaccatgatcatgattcatgaatcaaagcgtgatgaaaccgagagagcgcaggacacaaaccttagcaggccaagcagggaat  2649700     <----------DOF2     --------->MYB46(3)     --------->TOE2(3)  --------->ANAC46 ===========================HOX2a_HOX2a                                          <<<<<<<<<<<<<<<<<LFY --->GLK1(2)            --------->ANAC58                                      --------->ZAT2 ----ARR14(2)           --------->ANAC58                                --------->ANAC46 --->ARR14(2)        <------ZmHOX2a(2)                                  --------->ANAC58 ---------DOF2       ===========================HOX2a_HOX2a        <----------DOF2          <-------- ---->ZmHOX2a(1)    <---------ARR11(3)                           ------>ZmHOX2a(1) --------->ATHB12 ------>TOE2(3)     --------->ARR11(3)               <----------DOF2    --------->ANAC58    --------- ---GLK1(1) --------->ANAC58             ------>ZmHOX2a(1)<---------ZAT18   <-----------RAV1(2) -->GLK1(1) --------->ANAC58      <---------CCA1(2)  --------------------->WRI1<------ZmHOX2a(1)   cctttaactttagcaagaacgagatcacccaatctcatctctcctatcgccatagctttgttcgctcctcttttacgcccaggagccattggcgaaactg  2649800                --------->At4g35610                    ------------>CBF                <---------At4g35610                   --------->GLK1(2)                <---------ZAT2            --------->YAB1                                 <-----------GT1                --------->ZAT2          --------->ANAC46                             --------->ARR11(3)      --------->TOE2(3)                 --------->ANAC58       ---------->DOF2       <---------ARR11(3)      --------->TOE1(3)                 --------->ANAC58    --------->YAB1       --------->LBD16 -ARR14(2)  --------->YAB1       --------->GLK1(1)--------->LBD16              <---------LBD16    <-- >ARR14(2)  <-----------GT1  --------->YAB1      --------->LBD16           <-----------HVH21    <----   actacaaaccctaatcacagctcagatagaatcacaaatcccaagcaaaacccgagaatcaataagaaagtccaactcttcaccggagatttttcttccc  2649900                                                                                                -----                                                                                              <------      ---------->DOF2                                                                         <------    --------->DOF5.7(2)                                                                     --------- -------ALFIN1                     --------->ANAC46   <------ZmHOX2a(1)                    ---------- -----ALFIN1                  <----------DOF2     <------ZmHOX2a(1)    ---------->DOF2     ----------   acacccgttaaagagaatggagacagcaagggcttcaccgtaacgagtgagaggaaggagttgaatcggttgagaaagagagaaacttgaagagtgacgg  2650000                                            --------->MYB52(1)                                         <---------bZIP60(1)                                         --------->ANAC58                        <-----------GT1                                         --------->bZIP60(1)                    <-----------GT1                                         --------->ANAC58                  <---------DAG2                                         --------->ANAC46                  <----------DOF2                                         <---------ANAC55(2)             ------>NtERF2                                         --------->ANAC55(2)            --------->DEAR3(1)                                 ---------->DOF2                       --------->RAP2.3(1)  --------->CCA1(2)             <------NtERF2                          --------->ATERF1(1) ---->At5g28300     --------->ICU4    ----------->TGA1                 <------NtERF2  <---------ALFIN1 ---ANAC46          <---------YAB1 --------->ICU4                      --------->DEAR4(2)  ------>MYB46(1) ---DEAR3(1)   ----------->GT1 --------->LBD16                        <---------RAP2.3(1)  ------>MYB83 >MYB52(1)    --------->DAG2  --------->LBD16  ------->GAMYB          <---------ATERF1(1)--------->AtMYB61 ->HVH21     --------->DAG2  <---------LBD16----------->RAV1(1)      <---------DEAR3(1)  <---------MYB111(1) ->TGA1     ---------->DOF2  XXXXXXXXXXXXXXXXXXXX>MIR391           <-----------HVH21------>ZmHOX2a(1)   tgagatttagggcaaaaaggtgataattttcgccggaaagatgacgcaacagagaaacttgtttactctggtcgccgctttttttcctctacctcccctt  2650100                              <-----------GT1                           <---------AHL20(2)         <---------AHL20(2)                         <---------YAB1              --------->AHL20(2)                        <---------AHL20(1)           <---------AHL20(2)                       <---------ICU4             <---------ICU4                    <---------ICU4               --------->AHL20(2)        <---------MYB52(1)                   <------ZmHOX2a(2)             --------->ICU4           --------->LBD16                  --------->ARR11(3)             <---------ATHB51        --------->ANAC55(2)              --------->At4g35610                <---------AHL20(2)      --------->ANAC46              <---------At4g35610               <---------AHL20(1)      <---------LBD16     <-------TEIL <---------ARR11(3)            --------->AHL20(2)<----------DOF2   --------->ARR14(2) <---------YAB1           --------->YAB1    <---------DAG2  ------>ZmHOX2a(1)   <---------ARR14(2) --------->ICU4  <---------AHL20(2)   <-----------RAV1(1)   <----------DOF2   gttcatatacgttttgagcagatcattatttttttcattttttattccaaaataattaaatatgtggccttttctccgtaatcctttttccaacttctat  2650200                                          <---------MYB52(1)                                         ----------->GT1                                         <-------GAMYB                                         --------->At5g28300                                        <---------MYB46(3)                          <---------AHL20(1)                          --------->AHL20(1)                          <---------AHL20(2)                          --------->AHL20(2)                         --------->AHL20(2)                      ----------->GT1               ---------->DOF2          ----------->GT1     <---------YAB1          ----------->GT1--            --------->At4g35610<---------AHL20(2)--------->AHL20(2)        ---------->DOF2         --   atgggcttctcatgagctaaagcccaattttatttagttgggccgttaaaaaaaaatgaattgtgatgagaaaaaacaaaagcgaattgtaaattgaaac  2650300  Previous    Next  AGI:  At5g08230.1    Description:  PWWP domain-containing protein. similar to HUA2 (ENHANCER OF AG-4 2) [Arabidopsis thaliana] (TAIR:AT5G23150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42016.1); contains InterPro domain PWWP (InterPro:IPR000313); contains InterPro domain Regulation of nuclear pre-mRNA protein (InterPro:IPR006569) Range:  from: 2643539    to: 2649789    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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