Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   --------->YAB1                <<<<<<<<<ARR1                <---------ATHB12          ---------->DOF2        --------->ANAC46              <----------ID1    ----------->RAV1(1)             ---------->DOF2         <-----------------AGL1 --------At4g35610          --------->ANAC46                <-----------------AGL2                 <- ------->At4g35610          --------->ANAC58               -------->P   <------NtERF2           <---- --------->RAV1(2)          --------->ANAC58              <-----------GT1                 <---------ALFIN1 -->ANAC58      <<<<<<<<<ARR2     --------->YAB1----------->GT1<----------DOF2           --------->MYB46(3) -->ANAC58    --------->WOX13(1)  --------->AHL20(2)    <---------MYB52(2)             <-----------GT1   catctgcaacacaaaacaatcataaatcacactcaataaaaagacaaagaatgaaaaaactaaccctttctggcctcgtcttatgctcttaaccacttct  2633100                                ----------->HVH21                              --------->ZAT2                              --------->At4g35610                              <---------At4g35610                           --------->At4g35610                                       --------->YAB1                           --------->ZAT2                                        <---------AHL20(2)                           <---------At4g35610             ------>MYB46(1)    <---------ARR11(3)                           <---------ZAT2                  ------>MYB83       <---------AHL20(1)                    <---------ANAC58                       -------->P     <---------ICU4     ------>ZmHOX2a(1)    --------->ANAC46                ----------->RAV1(1) --------->AHL20(1) ----------GT1      <---------ANAC58   <---------ICU4    --------->AtMYB61--------->YAB1            - ------DOF2    <---------ICU4 <---------ZAT2          --------->ANAC46   <---------ATHB12   ---------   ttaactcctctcttcaaacatttcttcccagcagctgacaaaaattacagagcaatacaccaacatgagctactaatcaatatataatgagaaataaaga  2633200                                        <----------DOF2                            <------NtERF2                                        <---------DAG2                            --------->LBD16                                       <---------DAG2                            <---------DEAR3(1)                                  <------MYB83                      --------->HSFB2a(2)                                  <------MYB46(1)                   <---------HSFB2a(2)                                 <---------------AtSPL8            <---------LBD16------>NtERF2                                 --------------->AtSPL8           ----------->RAV1(2)                  <---------ZAT2 --------------->AtSPL3     --------->ARR11(3)   --------->ATERF1(2) -------->CCA1(2) --------->ZAT2<---------WOX13(1)          <---------ARR11(3)   <---------ATERF1(2) ->DOF2   ----------->HVH21  <---------TOE2(3)          ---------->DOF2         <---------LBD16   agatagagagatgtgaagcgagcttggaactgagattggtacctttttgaatgagtttgaaagttctcttctggagttttttgccggcgagaggtttagc  2633300                                                                                               <-----                                                                                              -------                  --------->ZAT18                                                             -------                  <---------ZAT18                                                       <---------ZAT2                 <---------ANAC58                                                   <---------ZAT2                 <---------ANAC46                                                   --------->ZAT2                 <---------ANAC58                                                   <---------STY1(2)                --------------->AtSPL3                                              --------->STY1(2)                --------------->AtSPL8                                          <---------At4g35610                <---------------AtSPL3              --------->At4g35610         --------->STY1(2)         --------->YAB1           <----------DOF2   <---------At4g35610    <---------AHL20(2) -------  <------ZmHOX2a(1)       <<<<<<<<<TBF1        <---------ZAT14         <---------CCA1(2)--------->At4g35610   gataggagcaagagtaatagcgtacttcttcttctccttttgaatcgacttctctgcttcggtatcgcttcccatattttttagctagctagctccaagt  2633400                         --------->LBD16                   <-----------RAV1(1)           <---------ANAC58                             ----------->HVH21      <---------ICU4 --------->ALFIN1             <-------GAMYB      --------->MYB52(1)<---------ANAC46         <---------MYB46(3)     <---------ATHB51<---------DEAR3(1)          ----------->GT1     <---------AHL20(2) ----------->GT1         <---------MYB55(1)                               <---    --------->AHL20(1) <---------LBD16          <--------P                   <---------YAB1   <------   --------->YAB1  --------->ALFIN1            <-------GAMYB                <-----------TBP  -------- ----MYB52(2)<------NtERF2<------NtERF2       <---------MYB46(3)       <---------TOE1(3)     -------- -->ANAC46 <---------ANAC46                  <---------DEAR3(1)        <---------TOE2(3)     -------- -->ANAC58 <---------ANAC58         <---------TOE2(3)   *TSS      --------->ALFIN1          <-------- -->ANAC58<---------LBD16----------->GT1     <---------RAP2.6(2)  <---------ZAT6        ----------->GT1   aacaaaaataatggcggaagagtgtggcggaaaaaactagggtttaggcggttgttatatgaccagaagtgttagggtttttatagagaagtgtattatt  2633500                                                                         --------->AHL20(2)                                                                         <--------HAHB4                                                                         --------->ATHB51                                                                         --------->ATHB12          --                                                                         <---------AHL20(2)        -- ----------->GT1                                                         -------->ATHB1           --- ------WRKY18(1)                                                        --------->ICU4            <-- ------CBF                                                              <---------ATHB51          <-- ->ATHB12                                   ----------->GT1             <---------ATHB12          <-- ->ATHB51                        <---------ANAC58        <---------ANAC46<---------ICU4           --- >ATHB1          --------->TOE2(3)         <---------TOE2(3) <---------AHL20(2)                 ----- -YAB1       <------ZmHOX2a(1)   <---------ANAC58     <--------P     ------------>ATHB5         <----   gaccagtaaaatataggaaccctaatttcatatgggcttgttaatgaggtaaactggttgcatataatggcccaattatttgggccttcatacagactaa  2633600            <---------WOX13(1)          --------->ATHB12         <-------TEIL ------->CCA1(2) ------->ARR14(1) ------>ARR11(3) -------ARR11(3)                                                            --------->AtMYB61 -------GLK1(2)               --------->ARR11(3)                        <---------ETT(1) -------ARR14(2)              <---------ARR11(3)       ------------------------>ANAC81 ------>ARR14(2)        <----------DOF2         <---------ANAC58     <---------ARR14(2) ------>ARR10    <----------DOF2                <---------ANAC58     --------->ARR14(2) -----TOE2(3)   >>>>>>>>>>>>WRKY18    <-----------RAV1(1)    --------->AHL20(2)           --------->AHL20(2)   gatttgctacattcattgacttttgactttgagatattgtatgttgtttagcttgaaaatcaaaaaaatcaaatccgaccaaaaaaaaaaaaaaaaatca  2633700                  --------->MYB111(1)                  --------->MYB52(2)               --------->TOE2(3)               ------------>MYB.PH3(2)              <---------YAB1                                   <---------AHL20(2)             <---------TOE2(3)                                 --------->AHL20(1)          <---------ARR11(3)                                   <---------AHL20(1)          --------->ARR11(3) <---------ANAC58                  --------->AHL20(2)         --------->YAB1      <---------ANAC46           --------->ANAC58        <---------TOE2(3)    <---------ANAC58           --------->ANAC58        <---------YAB1      <---------At4g35610         --------->ANAC46     ------>ZmHOX2a(1)      <---------ZAT2         <---------GLK1(2)     --------->ATHB12        ----    --------->TOE2(3) <---------At5g28300       ------->GAMYB <---------AHL20(2)                 <---    --------->TOE1(3)<-----------GT1           --------->MYB46(3)       <---------ATHB12         <--- <-----------GT1  --------->MYB46(2)         <-----------GT1  --------->AHL20(2)   <---------TOE2(3)   aattttccttaagataatgttagttactgtagctggtgaatgttatttaaccacattctcgcaaataaattccaacgattagtatgaggttttttatcgg  2633800         ---------->DOF2    --------->At4g35610                                                     <-----------GT1    <---------At4g35610                                                 <---------AHL20(1)  <-----------RAV1(2)                                           <---------ARR11(3) ----->ARR14(2)                                      ----------->HVH21  --------->AHL20(1) ------GLK1(2)                               <---------DAG2<-------TEIL<---------AHL20(2)  <---------YAB1 ------ARR14(2)<----------DOF2               <----------DOF2  <---------MYB52(1)  ---------->DOF2   atgctcagatgaaaagacttttttaaaaacttcaccaagtgattttgctttatccatgacatccattatctatatatattaccaaaaaacagtatgattc  2633900                                                     --------->ANAC58                                                     --------->ANAC58                                 ----------->GT1    --------->DAG2                                ---                                --------------->AtSPL8                                          -----                                <---------------AtSPL8                   --------->ATHB12       <----                             <------ZmHOX2a(1)     ---------->DOF2     <---------TOE2(3)        <----                           <---------TOE2(3)  --------->MYB52(1)    <---------WOX13(1)          <----         ------->MYC3  <---------ANAC46      ------->GAMYB       <---------YAB1               <------         <-------MYC3  <---------ANAC58     <---------MYB52(2)   --------->ICU4   <----------DOF2<---  ----------------->AG <---------ANAC58--------->ANAC46   --------->ICU4<---------YAB1   <---------YAB1   tattaccaaaacgtgtttctaacttgcttgaggaaatgtacaaacaactaacaaaaagccataagtgaagattgatgtttggagcttgaatgtcattgtc  2634000  Previous    Next  AGI:  At5g08180.1    Description:  ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein. Identical to H/ACA ribonucleoprotein complex subunit 2-like protein [Arabidopsis Thaliana] (GB:Q9LEY9); similar to ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [Arabidopsis thaliana] (TAIR:AT5G20160.1); similar to ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [Arabidopsis thaliana] (TAIR:AT4G22380.1); similar to unknown [Populus trichocarpa] (GB:ABK93593.1); contains InterPro domain Ribosomal protein L7Ae; (InterPro:IPR004037); contains InterPro domain High mobility group-like nuclear protein (InterPro:IPR002415); contains InterPro domain Ribosomal protein L7Ae/L30e/S Range:  from: 2631655    to: 2633456    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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