Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                          --------->MYB52(1)                                                                                          <---------ARR14(2)                                                                                          --------->ARR14(2)                                                                                    <---------WRKY38(1)                                                                                    <---------WRKY12                                                                                   --------->WRKY18(1)                                                                                  <--------ZAP1   <--                                                     <-----------ARR10          --------->MYB59   ---                                                     --------->GLK1(2)         <-------TEIL <--------                                                --------->ANAC58              --------->ARR14(1)  ---                                                --------->ANAC58              --------->GLK1(2)   <--                                              ---------->DOF2                --------->ARR14(2)  ----                                            --------->ANAC58                 --------->ARR11(1)  <---                                   ---------->DOF2   <---------ARR14(2)      <---------ARR14(2) -----                    --------->TOE2(3)       --------->ANAC58--------->YAB1   <---------GLK1(2)-------   tttcaagtgtccaatatcaaaaccacaatcgaatggggaaagggaaacgaaagcaaatctaatcagaaacagcaattcagattcggtcaacataaccgga  2627700                                                                                           <------NtERF2                                                                                           --------->ATERF1(1)                                                                                          <---------DEAR3(2)                                                                                          ------>NtERF2                                                                             <---------ANAC46                                                                             <---------DEAR3(1)                                                                             --------->ALFIN1                                                                            <---------At4g35610                                                                            <---------LBD16--------->RAP2.3(1)                                                                            ------>NtERF2 <---------ATERF1(1)                                                                            <------NtERF2 <---------RAP2.3(1)                                                                            --------->ATERF1(1)                                                                           <---------RAP2.3(1)                                                                          <---------RRTF1(2)                                                                          <---------RAP2.6(2)      <---------ATHB12                                                    <---------DEAR3(1)  <------NtERF2      --------->ICU4                                                      <---------RAP2.3(2)------>NtERF2    --------->WOX13(1)                                                   --------->ATERF1(1) --------  --------->At4g35610                        <---------WRKY18(1)       --------->ARR14(2)<---------DEAR3(1) -----ZmHOX2a(2)                             >>>>>>>>>WRKY18           <---------ARR14(2)--------->DEAR3(1) -------ARR14(2)                         ------>ZmHOX2a(2)           --------->LBD16     <---------At1g77200 ------>ARR11(3)                        <------ZmHOX2a(2)          <---------LBD16      --------->ATERF1(1) -LBD16--------->YAB1        --------->CCA1(2)  <----------DOF2   --------->MYB52(1)   <-----------HVH21 ------>ARR14(2)        --------->LBD16<---------ARR11(3)        --------->DEAR3(1)  --------->HSFC1(2) -------ARR11(3)      <---------LBD16  --------->ARR14(2)        --------->AtMYB61   <---------HSFC1(2) ----->GLK1(1)       -------->P    <---------LBD16               <---------ALFIN1    <---------HSFB2a(1) ------GLK1(1)       --------->MYB52(1)<---------GLK1(2)        --------->MYB46(3)   --------->HSFB2a(1) ------>ARR10       --------->MYB52(1) <---------ARR14(2)       <---------MYB55(2)<------ZmHOX2a(1) -->LBD16         <---------MYB52(2) --------->LBD16          --------->AtMYB61<------NtERF2---------   gatcagcaatcatcgaaaaaactaaccggagagatgagccggatccttgactttcttagctagaccaccaccggatgcggcggaggaagcgtcggcgaca  2627800                                                                                                    <                                                                                                    -                                                                                                    <                                                                                     --------->AtMYB61                                                                                    <---------At4g35610                                                                                    --------->At4g35610                                                                                 --------->TGA2(2) <-                                                                                <-----------TGA1 <---                                                                               --------->ANAC46  <---                                                                               --------->ANAC55(2) --                                                    <------ZmHOX2a(2)          --------->ANAC55(1)<--                                                   <---------ARR14(2)          ======================                                        --------->ZAT2                         =====================MYC_MYB                                        <---------ZAT2 ------>ZmHOX2a(1)       --------->O2   -------                                        --------->At4g35610                    --------->TGA1a-------                                        <---------At4g35610                    --------->ANAC58  <---                                       --------->ARR14(2)                      <---------ANAC55(2)---     <---------WRKY18(1)               <---------ARR14(2)         <---------YAB1<-----------HVH21<---    --------->WRKY12                  ------>NtERF2<---------ARR11(3)         <-----------STF1-------    --------->WRKY38(1)              --------->DEAR3(1)==========================HOX2a_HOX2a <-------  <---------ANAC58       <---------ARR14(2)        --------->ARR11(3)         --------->SPL7 --------  <---------ANAC58       --------->ARR14(2)------>NtERF2      <---------GLK1(2)--------->ANAC58<----- --->RAV1(1) <----------ID1     ------>ZmHOX2a(1)  --------->ARR14(2)<---------WOX13(1) <---------ALFIN1 -->HVH21  ---------->DOF2      ===========================HOX2a_HOX2a    ------>ZmHOX2a(2) <-------GAMYB   atttccttgaccaaaaagacgaatgcgaaacctccttcgccgagctgcctcacgatcctgaatcgattctcattgatccatacgtcacctccaccgttga  2627900       --------->DAG2      ---------->DOF2   <---------ANAC46  <------NtERF2 ------>NtERF2 ---------DEAR3(1) -------->DEAR3(1) ---------ANAC46 -----NtERF2 ------DEAR3(1) ------RAP2.3(3) ------->ATERF1(1) -------RAP2.3(1) ================bZIP_DOF ---->HVH21 <---------ANAC58                                                   ------->TEIL -->WRKY38(1)                                                               <---------ATHB12 ------RAP2.3(2)                                                            --------->MYB46(3) --->NtERF2<-------TEIL                      --------->ANAC58              ------>MYB83 ------RAP2.6(2)      ------>ZmHOX2a(1)      --------->ANAC58              ------>MYB46(1) -->WRKY12 <---------ZAT18      --------->MYB46(3)    --------->ANAC58    --------->MYB52(1)       -- --MYB52(1)--------->ZAT18     ---------->DOF2        --------->ANAC46  --------->MYB46(3)         == ->DOF5.7(2)<---------ANAC58  --------->MYB52(1)      --------->ANAC58<---------WRKY18(1)  <---------DAG2 ----DOF5.7(2)        --------->LBD16        --------->ANAC46     ------>ZmHOX2a(1)     <-----------GT1   cggcgtcgtaaagtgcgttcaatcctgaaaacgaacagcccatgctcacgaatcacacgcacaatctcctcttgaccaacgaatcgatagaaacctttcg  2628000                                 --------->ARR14(1)                                 --------->CCA1(2)                                <---------ARR14(2)                                --------->ARR14(2)                                --------->ARR11(1)                                <---------GLK1(2)                           =============================HOX2a_HOX2a                           ==============================HOX2a_HOX2a                         ------>ZmHOX2a(2)                        <------ZmHOX2a(2)                       <---------ARR11(3)                       ---------->ID1              ---------                       <---------ARR14(2)         ------>ZmHOX2a(2)                         ---------                       --------->ARR14(2)        <------ZmHOX2a(2)                          <--------                       <---------GLK1(2)        <---------ARR11(3)                <---------AHL20(2)                     ----------->ARR10          <---------ARR14(3)               <---------AHL20(2)             <---------GLK1(1)----------->ARR10 <---------ARR14(2)               --------->YAB1         <---------TOE2(3) ------>ZmHOX2a(1)    --------->ARR14(3)           <---------AHL20(2)     --------->ARR11(3)--------->ARR11(3)       --------->ARR14(2)           <---------YAB1--------->ALFIN1 ---->ZmHOX2a(2)   ---------->DOF2<-------TEIL  --------->ARR11(3)           --------->AHL20(2) =================================HOX2a_HOX2a<---------HSFB2a(2)<---------CCA1(2)--------->AHL20(2)--   atctgaagattatggaattcgtaaagatccttcagattcgcattattcgagatctcgattttcttcgtctctctgtgttttaattatatggaagtgtaga  2628100                                                                                       --------->AHL20(1)                                                                                       <---------AHL20(1)                                                                      --------->AHL20(1)                                                                      <---------AHL20(1)                                                                <---------ANAC55(2)    <---------AHL20(2)                                                                --------->ANAC55(2)<---------AHL20(1)                                                            <-----------HVH21      <---------AHL20(2)                                                          --------->LBD16          --------->AHL20(2)                                                         --------->ANAC55(2)      --------->AHL20(2)                                                         <---------ANAC58 --------->AHL20(2)  <------                                                         <---------ANAC58 <---------AHL20(2)  <------                       <---------At4g35610               <---------ANAC46 <---------AHL20(1)  <------                       --------->At4g35610               <---------ANAC55(2)    --------->TOE2(3) >ZAT14            <-----------HVH21              ------------>CBF    --------->AHL20(2)<---------AHL20(2) >REM1(2)  *TSS<-------TEIL               <-------TEIL   <---------ANAC55(1)  <---------AHL20(2) -ZAT14<---------REM1(1)     --------->ANAC46    --------->ANAC58     <---------AHL20(2)--------->AHL20(2) ------->CCA1(2)--------->YAB1   ------------>CBF--------->ANAC58 --------->AHL20(2)   --------->AHL20(2)   gatttggagttgaagcattcatgtcagctatacgatacaatacatacaggcacacaattccgtgtcacttaattaattaattcattaaatttatttgcgt  2628200                                                                           --------->MYB46(3)                                                    --------->DOF5.7(2)   ------>MYB83                                                   --------->TOE2(3)  --------->SPL7                                                  <---------ICU4    <---------SPL7                                                  --------->ATHB12 <---------ANAC58                <--------P                        --------->YAB1   <---------ANAC58  <---------ATHB12        <---------MYB46(3)          --------->ARR11(3)            --------------->AtSPL3      <---------WOX13(1)   --------->MYB52(1)    <---------ATHB12 --------------->AtSPL8     <------------CBF   --------->YAB1           --------->ICU4--------->DAG2      --------->WOX13(1) <---------At4g35610--------->AHL20(2)    ----------->RAV1(1) ---------->DOF2---------->DOF2 ---ANAC58    ----------->GT1       <---------AHL20(1) <---------TOE2(3)  ------>MYB46(1) ---ANAC46   <---------HSFB2a(2)    <---------ARR11(3)<---------DOF5.7(2)----------->RAV1(1) ---ANAC58  <---------ANAC46 --------->ZAT6     <---------ARR11(3)<---------------AtSPL8   tttagctaattggttcgggtaaataaacataacgctaatatatccaacaaaatcattaacgagaaaaagtcgtaccaacaaaagacaatcagtttataat  2628300                                                                                                    -                                                                                                   --                                                                                       ----------->GT1                                                                                --------------->AGL15                                                                                <---------------AGL15                 --------->ANAC55(2)                                           ----------------->AGL2                 ----------->GT1           --------->MYB52(1)                  ----------------->AGL3                 <---------ANAC55(2)      ------->GAMYB                   <---------AtLEC2     ------              --------->ICU4             <---------MYB52(2) ---------->DOF2    ----------------->AGL1            --------->YAB1       --------->YAB1  --------->AHL20(2)   --------->CCA1(2)<---------TOE2(3)   ccacaatttagtagtcatcatgtaatatggaactaatataacaactaacaatgaaatacttcaaaagtagagatttgaatggccaaattaagaaaaaaaa  2628400                                    -------->HAHB4                                    <---------AHL20(2)                                    <---------ICU4                                   --------->ICU4                                --------->AHL20(2)                                <---------AHL20(2)                                --------->AHL20(1)     --------->MYB52(1)                     -------                               --------->AHL20(2)      <-----------GT1                     --------->ANAC58                               <---------AHL20(2)  <---------ICU4     <---------YAB1       --------->ANAC46 -------->YAB1           ----------->GT1        --------->YAB1     --------->GLK1(2)--------->ICU4 --------->GT1 <---------AHL20(2)  <---------YAB1 --------->ICU4   --------->ARR11(3)      --------->ANAC58 --->AHL20(2)  --------->AHL20(2)  <---------ATHB51<--------HAHB4  <---------ARR11(3)---------->DOF2   aatgaaaattctactaaaaaaatacaaatgtaaattaattattcaaacttgcataattaacagaacaaaaatctaattgttatgccataatgcaagcaaa  2628500                                                                      ------->TEIL                                        ------->GAMYB                --------->MYB52(1)                                       <---------MYB52(2)       <---------AHL20(2)                                     <---------DOF5.7(2)   ===================================HOX2a_HOX2a                                     --------->MYB52(1)    ------>ZmHOX2a(2)                        --------->ARR11(3)                 ----------------->AGL3                        <---------AHL20(2)     --------->AHL20(2) <---------TOE2(3)                        <---------ARR11(3)  --------->YAB1====================================HOX2a_HOX2a                     --------->YAB1 <---------WRKY12      <------ZmHOX2a(2)                    <---------ATHB51<---------WRKY38(1)  <---------ARR14(2)                       ---                    <---------ATHB12<---------WRKY45     --------->ARR14(2)               --------->ANAC58          --------->YAB1--------->AHL20(2)  --------->TOE1(3)   --------->AHL20(2)        --------->ANAC58          <---------ICU4<---------AHL20(1)  --------->TOE2(3)  <---------ATHB12        ------>ZmHOX2a(1)    ------>ZmHOX2a(2)--------->AHL20(2)--------->MYB46(3)<---------ARR11(3)         ---------->ID1<-- --->DOF2--------->ICU4 --------->AHL20(1)------->TEIL  <------ZmHOX2a(1)        --------->SPL7   ---   gtttgatcggaatgatgacccaataatatatttcttagtcaacgaaccataaaatacaggatccaattaatgaacggctctcgttcgtcctcaagcttca  2628600  Previous    Next  AGI:  At5g08160.1    Description:  ATPK3 (Arabidopsis thaliana serine/threonine protein kinase 3); kinase. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G32850.2); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G32850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67956.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009) Range:  from: 2625560    to: 2628111    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g08170.1    Description:  ATAIH/EMB1873 (AGMATINE IMINOHYDROLASE); agmatine deiminase. Identical to Agmatine deiminase (AIH) [Arabidopsis Thaliana] (GB:Q8GWW7;GB:Q94IC7;GB:Q9LEZ0); similar to unnamed protein product [Vitis vinifera] (GB:CAO67957.1); contains InterPro domain Porphyromonas-type peptidyl-arginine deiminase (InterPro:IPR007466) Range:  from: 2628326    to: 2631099    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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