Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     --------->ATHB12                                                                             --------->YAB1                                         <---------ICU4                      <---------ICU4                                        --------->ICU4                    --------->YAB1                                        <---------YAB1                    <---------ICU4                                      --------->YAB1                     <---------YAB1                                --------->YAB1                         --------->YAB1    <-----------RAV1(1)                    --------->YAB1    <---------ICU4                   <---------ICU4   <---------TOE2(3)                    <--------HAHB4   --------->ICU4                   <---------YAB1 <---------YAB1                    <---------ICU4 --------->YAB1                --------->YAB1 <---------ICU4                   --------->ICU4 --------->ICU4                 <---------ICU4 --------->YAB1                   <---------ATHB12<---------ICU4    --------->YAB1 --------->YAB1 <---------ICU4                   <---------YAB1 <---------YAB1    <---------ATHB12<---------ICU4--------->ICU4       --------->ZAT14          <---------ICU4    --------->ANAC46 <---------YAB1 <---------YAB1       --------->ZAT18         <---------YAB1--------->KAN4(2)  <---------YAB1 <---------YAB1       <---------ZAT14       <---------ICU4  <-----------GT1    --------->ICU4 --------->ICU4 -->TEIL    --------->ZAT14  --------->YAB1<---------YAB1   <-----------TGA1<---------YAB1          -   gctatgaactacactgtagctatcattaccatcatcataatcatgattatccccatcatcttcgtcatcatcatcatcatcatcatgattaatgttgttg  2622300                                                      --------------->AGL15                                --------->TOE2(3)     <---------------AGL15                               --------->ATHB12  <<<<<<<<<TBF1                              <------------------------ANAC81                                   -----                         <---------CCA1(2)    <<<<<<<<<TBF1                                    <----- ------>TEIL     --------->AtMYB61     <----------DOF2<----------DOF2   ------>ZmHOX2a(1)      ------   tgaaccctagtagtctccaccaaaaccatctcttcattagtctttttcttcttcttctttatagagttttgctcctcaatctcttgagcaagtttgagat  2622400      <---------ANAC58      <---------ANAC46      <---------ANAC58                                                                 --------->YAB1 <-----------RAV1(1)                               <---------ALFIN1                  ---------------- =============================RAV --------->ARR14(2)                          <---------ICU4 <---------bZIP60(2)      <-------TEIL            --------->MYB46(3)         <---------YAB1 <---------REM1(1)<-----------RAV1(2)           <---------ALFIN1           <---------ICU4           < ---->CCA1(2)  <---------PCF2     <---------ARR14(2)                       --------->YAB1       ----- ----ARR11(3)  <---------PCF5     --------->GLK1(2)--------->AtMYB61<<<<<<<<<TBF1  <---------YAB1   < --->ARR11(3)  --------->TCP20--------->YAB1   --------->MYB46(3)<<<<<<<<<TBF1--------->YAB1---------   atgatgtggcttccatgggaccagaagatgcatcagaatccattgaatcaccaccatcgctatcttcttcttcttcatcatcatcaccatagtaacaatc  2622500                                                                ===============HOX2a_HOX2a                                                            <---------ARR14(2)                                                       ----------->HVH21         --------->TOE1(2)                         <---------At4g35610               <---------At4g35610        --------->YAB1                             --------->ZAT2          ---------->DOF2        --------->ATHB12                           ----------->RAV1(2)   ------>ZmHOX2a(2)       <------ZmHOX2a(2)                           --------->At4g35610  <------ZmHOX2a(2)      --------->ARR11(3)                           <---------ZAT2      <---------ARR14(2)      <---------ARR11(3)                        <---------At5g28300<---------At4g35610 ----->WRI1                                   <-------TEIL  --------->ARR14(2) --------->ARR11(3) -----------HVH21                           <---------GLK1(2)   ================HOX2a_HOX2a ---->YAB1                   <-------TEIL   --------->ARR14(2)  ------>ZmHOX2a(1)    --------->At4g35610 -----------TGA1     ----------->GT1        <---------ARR14(2)--------->YAB1   <---------ARR11(3) >MYB46(3)        --------->ALFIN1     --------->AtLEC2<---------ETT(1)--------->ARR14(2)           <   gtcgtcacgatcatgggactgtgaggctaaatacatcgtccatccagattcacagctgcgacaatcctcatcggatccaaagatgtttgcagactccatt  2622600                                                                                                    -                                                                                                   --                         <---------ANAC58                         >>>>>>>>>TBF1                    --                         <---------ANAC46             --------->CCA1(2)                          ----                         <---------ANAC58            <---------ARR11(3)                          ----     <-----------GT1   <---------ANAC46              --------->ARR11(3)            --------->LBD16 -- ----------DOF2     <----------DOF2                <---------TOE2(3)     ---------->DOF2 ---------->DOF2   ttctttataactatataaaactcttttgtgtgtgtgtgtgtgtgtttatatttaagatataaacagaagaagaaacaaagagacccccaaacaaagagac  2622700                                                 <---------ANAC55(2)     ---------->DOF2                        <---------RVE1(1)               --------->ANAC58 ------->GAMYB                             <---------ARR11(3)               --------->ANAC58 -------->MYB46(3)                   --------->ZAT2                     --------->ANAC58 ---->MYB83             --------->At5g28300--------->ARR11(3)           --------->ANAC58 ------>P    ---------->DOF2         --------->At4g35610         --------->ANAC46 ----->AtMYB61         ----------->GT1   ----------->ARR10       --------->ANAC58 ----->MYB46(3)      *TSS            <---------At4g35610         --------->ANAC58   ------->TEIL ---->MYB46(1)--------->DAG2        --------->GLK1(2) ------------>CBF  --------->ANAC46            -   caaccaaaaaagccctaaagtgagacagtaacaagaagaagctgagatattaagtaaacaatccaacaaggaacaagcaagtactgtatgtgtatatcag  2622800                                            <---------ANAC46                                            <---------ANAC58                                            <---------ANAC58                          <---------ANAC55(2)--------->LBD16                     <---------AHL20(2)  ------->TEIL                    --------->AHL20(2)   <---------ARR14(2)        <------MYB83                 <-----------TBP         --------->ARR14(2)        <------MYB46(1)                --------->ARR14(2)      <---------CCA1(2)------->TEIL     ---------->DOF2               <---------CCA1(2)    <---------ANAC46     --------->ARR14(2)             <---------ANAC46   <---------ANAC58         <---------ARR14(2)                    <-----    ------->TEIL<---------ARR14(2)--------->ALFIN1   ------->TEIL  ----------->GT1             ------ ------>TEIL ----------->GT1    <---------ANAC58 ------->TEIL  ------->TEIL <----------ID1-----------   tgtatgtatgtaagcgcgtatatataatatgtaagcgtgtgtgtatccgtgtatgtatgtatatgcatttggtgataaaagacaaaataagaaggttact  2622900                                            --------->GLK1(2)                                           <---------ARR14(2)                                          <----------TaMYB80                                          <---------HSFB2a(1)                                          --------->KAN4(1)                                          <---------KAN4(1)                                          --------->HSFB2a(1)                                         <---------KAN4(2)                            ----------->GT1--------->KAN4(2) xxxxxxxxxxxxxxxxxxx>smallRNA(si3)       ---------->TaMYB80   ----------->GT1 ----ANAC55(2) --------->AHL20(2)  --------->DAG2           ----------->GT1                         < --->ANAC55(2) <---------AHL20(2) --------->DAG2      ---------->DOF2         <-----------GT1       - >GT1         --------->AHL20(2) ---------->DOF2  <<<<<<<<<WRKY18      ----------->GT1 <---------AHL20(2)   taaaaaaaaaaaaaaaaaaaatttagaatttgggaaaaaggggaatattctgtcaaaaaagagagagaaaaaatggaatataacttgattttttttggga  2623000                                                  <---------ANAC46                                                  <------MYB83                                                  <---------ANAC58                                                  <------MYB46(1)                                                  <---------ANAC58                                                 --------->MYB111(2)                --------->At4g35610              <---------MYB46(3)       <---------YAB1                            --------->MYB55(2)      --------->ARR11(3)          --------->CCA1(2) --------->ALFIN1      <---------ARR11(3)     ---------->DOF2  <---------ZAT2                                 --------  ---------->DOF2          <---------YAB1     <-------GAMYB                                 --------- ---------AHL20(2)       --------->YAB1  --------->ALFIN1                                   --------- -------->AHL20(2)    <----------DOF2   <------ZmHOX2a(1)                            <---------AHL20(2)   aattaaaagataattagaggctgacttttataaaagataagaggagggagttgggtggaagagatagagatggagaagaggttgtatttaaaacacctga  2623100                                                       --------->AHL20(2)                                                      <---------AHL20(1)                            -                                                      --------->AHL20(1)                            <                                         --------->ZAT14                                            <                                         <---------ZAT18                       --------->ANAC58     -        <-----------GT1                --------->ZAT2--------->AHL20(2)        --------->ANAC58    <- ->TOE1(2)                             --------->At4g35610          --------->AHL20(2)             <- -->RAV1(2)                    ---------->DOF2  ----------------->AGL3         --------->ANAC46    -- >At4g35610           <----------DOF2  <---------At4g35610        --------->TOE2(3)   --------->YAB1<   gaattgctatttatctctcatcttctttctgaccaaagaacagctcactacccaaatatatatatcaaacttaaataatacaagacaaacatacccatcc  2623200  Previous    Next  AGI:  At5g08150.1    Description:  unknown protein Range:  from: 2622031    to: 2622721    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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