Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------->TOE2(3)                                              ------>ZmHOX2a(2)                                            --------->ARR11(3)                                            <---------ARR11(3)                       --------->ARR14(2)                                    ------>MYB46(1)--------->At4g35610               --------->ARR11(3)                                    ------>MYB83------>ZmHOX2a(1)                    <---------ARR14(2)                                   ----------->RAV1(1) <----------DOF2               --------->GLK1(2)     --------->ANAC46             --------->AtMYB61<---------At4g35610    --------->YAB1     --------->ANAC58            --------->MYB46(3)<---------ZAT2      <----------DOF2<-------TEIL     --------->ANAC58   <---------ANAC58   --------->YAB1    <---------ANAC58     <---------TOE2(3) >GLK1(2)               <---------ANAC58  <---------ATHB12   <---------ANAC58     <---------TOE1(3)   tatggacacgcttcttcatcccgttttcgtttctcaccaacacaatgatcctcagctcttttagcgttttcatctttcatagttgaggttcttgaactca  2599700                                                                                        --------->YAB1                                                                                     --------->YAB1                                                                                   --------->ICU4                                                                               <-----------HVH21                                                                               <-----------TGA1                                                                              --------->ANAC46                                                                              --------->DEAR3(1)                                                                            <---------At5g28300          <---------YAB1                                ----------->GT1    <-----------GT1     <------MYB83                                      --------->ANAC46 --------->GLK1(1)           <     <------MYB46(1)                    <---------ARR14(2)              <---------GLK1(1)          --     --------->HSFB2a(1)               <---------HSFC1(2)              --------->ARR11(3)         ---     <---------HSFB2a(1)               --------->HSFC1(2)              <---------ARR11(3)        ----  <------ZmHOX2a(1)                    --------->HSFB2a(1)        --------->TOE1(2)<---------YAB1----   aggaggaaggttttgataaatcaggttttggagtctgtcgaagttccttcttcttaaacggaaataaacccaagatatcaccgtcattaatagtaatcgc  2599800        <---------ZAT6    --------->ZAT14    <---------ZAT14                  --------->DAG2         --------->TOE2(3)                -------- ---------ALFIN1                    ---------->DOF2       <---------YAB1          --------->ANAC58 ------->MYB46(3)           --------->ANAC58           <---------AHL20(2)         --------->ANAC46 --->NtERF2                 --------->ANAC46          --------->AHL20(2)          --------->ANAC58 ----->ANAC46               --------->ANAC58      <---------YAB1    <---------At4g35610      -------- ----->DEAR3(1)           <-----------GT1      --------->GLK1(2)    --------->At4g35610    ----------   agccactctagtgtccaatttcaatttctcaccctacaaaaagagagaaattctaattttatccttgaagagctgatttagaaaacgaaacttgaaagca  2599900                       --------->YAB1                    --------->YAB1                 --------->YAB1            <---------ANAC46                                                                    <----            ----------->GT1                                                                     =====          --------->ZAT18                                                                   ========= ->ANAC58 --------->ZAT14       --------->TOE2(3)                                           <-------- ->ANAC58 <---------ZAT14 --------->YAB1                                          <---------ARR11(3) >DOF2   --------->ALFIN1 <---------ICU4                       <------ZmHOX2a(1) <------ZmHOX2a(1) --   atcgcgaacgagtgtagtagaataataagcattaccttgatatacagatggaaattggaagaagaggaagcgggagggaaacaggattttagggctttct  2600000                                                                                                 <---                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                              ------>NtERF2                                                                                           ------>NtERF2                                                                                           --------->At4g35610                                                                                           <---------At4g35610                    --------->At4g35610                                                    --------->ZAT2                <-----------HVH21                                                          <---------ZAT2                <-----------TGA1                                                          <---------DEAR3(1)               --------->TGA1a                                                          ------>NtERF2               ==========================================MYC_MYB                        --------->LBD16               --------->O2                       <---------MYB52(1)                    <---------ATERF1(1)     <---------ANAC55(2)                  <---------ARR14(2)                           --------->DEAR3(1)     --------->ANAC55(2)    --------->TOE1(3)     --------->DOF5.7(2)     --------->ZAT14 --------->DEAR3(1)     --------->ANAC58    <---------GLK1(1)--------->ARR14(2)          ======================HOX2a_HOX2a     --------->ANAC58  <------ZmHOX2a(1) <---------DEAR3(2)           ------>ZmHOX2a(2)--------->ANAC46 <-----------HVH21  <---------At4g35610<------NtERF2                 <------ZmHOX2a(2) <---------ALFIN1 ------DOF2    <---------O2----------->RAV1(2)   <-------GAMYB     --------->GLK1(1) <---------ATERF1(1) ========================bZIP_DOF    <---------DEAR3(1)            <---------GLK1(1) ------>ZmHOX2a(1) ========================bZIP_DOF    <---------MYB46(3)     ----------->HVH21<<<<<<<<<TAC1--------->RAP2.3(2) --DOF2    <-----------HVH21--------->TOE2(3)    --------->At5g28300 =======================HOX2a_HOX2a ------->MYB59 <---------TGA1a     <-----------HVH21<---------DOF5.7(2)   <---------ZAT14--------->RAP2.3(1)   ttaggtcacgaattgtcccgtcagaggaaacctgaacggtcgtcgattcgccgttaatgcttcggacagagatcggaacactgtctcctccgccgctgcg  2600100                         <---------DAG2                         <-----------TBP                         <----------DOF2                   <---------TOE2(3)                      <-----------GT1                <---------DAG2                  <---------ARR14(2)                 <----------DOF2 ------CCA1(2)    --------->ARR14(2)              <---------ARR11(3) ----ANAC58     --------->LBD16                   --------->ARR11(3)                      <----------DOF2 ----ANAC46   <---------LBD16                 ---------->DOF2  ------->TEIL       <-----------RAV1(1) ----ANAC58  --------->MYB52(1)           ---------->DOF2<---------AHL20(2)     <----------DOF2   tctctcgttctccattaccggattttactttttccttccattaacaaagaaagaactttttaatgtatatatagttttaaaactttgttgggctttgaac  2600200                                                       <-------MYC2                                                       ------->MYC3                                                       <-------PIF5                                                       <-------MYC3                                                       ------->MYC4                                                       <-------MYC4                                                       ------->PIF5                                                       ------->MYC2                                                       ------->PIF4                                                       <-------PIF4                                                      --------->ANAC55(2)                                                      <---------TGA1a                                                      <---------ANAC46                                                      <---------ANAC55(2)                                                      <---------O2                          --------->LBD16             --------->O2                                <--                         --------->ANAC58             --------->TGA1a                             ---                         <------NtERF2               ------------>OsbHLH66                        <--                         --------->ANAC58           <------------OsbHLH66                     -------                        ------>NtERF2         <---------ARR14(2)         <---------AHL20(2)  ========                        <---------LBD16       --------->ARR14(2)       <---------YAB1        <-------                        --------->LBD16    --------->RAP2.6(2)       <---------ICU4          --------                       <---------ANAC58   ----------------->AGL1     --------->YAB1          <-------                       <---------ANAC58   <-----------------AG      --------->ICU4           --------                       <---------ANAC46  <---------At4g35610        <---------YAB1       <---------ALFIN1                    <-----------RAV1(1)  --------->At4g35610     <---------AHL20(2)   <-----------GT1                  --------->MYB52(1)    --------->DEAR3(1)       <---------YAB1      <-----------GT1   tcgacttcgtatcgatgggctaatggcgcggaatttttgacacagccgaattcggcacgtgtgaaatattattattattttgtattttttcccacccgtg  2600300                                              ---------->DOF2    <---------YAB1                           <---------AHL20(2) -------ZAT14                          <---------MYB59 ------>ZAT18               ---------->DOF2<---------YAB1 -------ZAT18    <---------GLK1(2)     <---------DAG2 -->LBD16      <---------TOE1(3)  <---------MYB59 ======================================bZIP_DOF --O2<--------HAHB4   --------->ZAT6   --------->TOE2(3) ->TGA1a       <---------TOE2(3)<---------ARR11(3)    ------------>CBF --TGA1a       <---------YAB1   --------->ARR11(3)  --------->GLK1(1) ->O2--------->YAB1  <---------YAB1    --------->TOE1(3)       --------->At4g35610                  <   tgaactattattagattaagattatcactaaaaagaccttaccttattaaaaggaattcaatgtgagcccaaactatattttgttaactaattaagccca  2600400          --------->LBD16                                        <---------ANAC58  ---------->DOF2    <---------ICU4                                               <---------ANAC58>>>>>>>>>RAP2.2   <---------YAB1                                            <---------GLK1(1) --------->ARR11(3) --------->YAB1                        <----------DOF2       --------->GLK1(1) <---------ARR11(3) -------TEIL                       <---------RAP2.6(2)   <---------WOX13(1)   <---------CCA1(2)   aattcatcattccacgatttcaagttgaacaagtatggctgctttagattccaaagttgatagatttccttgttaagagtatatctaaagtaaactattg  2600500                                              <------ZmHOX2a(2)                                             <---------ARR11(3)                                    <---------TOE2(3)                                              --                                   --------->YAB1           <-------TEIL                          <--          <-----------GT1         <---------ATHB51      <-------TEIL                           <-----    <-------TEIL                  <---------ATHB12     --------->CCA1(2)                       <----- --------->At4g35610  <---------AHL20(2)     --------->ARR11(3)        <---------ATHB12        <-----   aacagatgcattatacaatctgattttatgttcccaataatgtagaagatcatatagatacatacatgctcaaatgaagaaacaaaaactcagagttgcg  2600600  Previous    Next  AGI:  At5g08110.1    Description:  DEAD/DEAH box helicase, putative. similar to DEAD/DEAH box helicase, putative [Arabidopsis thaliana] (TAIR:AT3G18600.1); similar to hypothetical protein OsI_025884 [Oryza sativa (indica cultivar-group)] (GB:EAZ04652.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67932.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626); contains InterPro domain Helicase, superfamily 1 and 2, ATP-binding (InterPro:IPR014021); contains InterPro domain DEAD-like helicase, N-terminal (InterPro:IPR014001); contains InterPro domain DNA/RNA helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain DNA/RNA helicase, DEAD/DEAH box t Range:  from: 2594971    to: 2600115    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g08120.1    Description:  MBP2C; protein binding. similar to MFP1 (MAR BINDING FILAMENT-LIKE PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT3G16000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67935.1) Range:  from: 2600475    to: 2602928    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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