Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             ---------->DOF2                                                       ----------->HVH21                                                     <---------TGA1a                                                     <---------O2                                                     --------->TGA1a                                                     --------->O2                                                     --------->ANAC46                                                     =================bZIP_DOF                                                     --------->ANAC55(2)                                                     <---------ANAC55(2)                 --------->MYB46(3)            <-----------GT1                         ------>MYB46(1)                    --------->MYB52(1)         --------->YAB1                           --------->TOE2(2)        ------>ZmHOX2a(2)     <---------AHL20(2)                          --------->MYB46(3)      --------->ARR14(2)     --------->AHL20(2)                      ------>ZmHOX2a(1) <---------ARR11(3)      ------>MYB83     --------->AHL20(1)                      =====================================HOX2a_HOX2a     <---------AHL20(1)                     --------->TOE2(3)  --------->ARR11(3)   --------->ANAC46    --------->AHL20(2)<---------ICU4 --------->YAB1 ------>MYB83         <---------ARR14(2)      ---- >MYB52(1) <---------YAB1           <---------YAB1--------->TOE1(2)      <---------AGP1------>MYB46(1)   gagagaataaattataactgttcatcatctcggttcttatcattttcctcaacctacgtgacaaagaactcactcgatctgtctaaacccaacgacttcg  2584500                                                                                                  <--                                                                                           ==========                                                                                           <------ZmHOX2a(2)                                                                                          <---------ARR14(3)                                                                                          --------->ARR14(3)                                                                                          <----------                                                                                          <---------GLK1(2)                                                                                          --------->ARR14(2)                                                                                          --------->ARR11(3)                                                                                          <---------ARR14(2)                                                                                          --------->AGP1                                                                                          <---------ARR11(3)                                                                                         <---------CCA1(2)                                                                                        ----------->ARR10                                                                                      =============HOX2a_HOX2a                                                                                      ------>ZmHOX2a(1)                                                                                     --------->TOE2(3)                                                                                    =================                                                                                    ------>ZmHOX2a(2)                                                     --------->AHL20(2)            <------ZmHOX2a(2)                                                     <---------YAB1                ==================                                                     <---------AHL20(2)           --------->ARR14(2)                                                    --------->AHL20(1)       <----------DOF2     ----                                         <---------ANAC58                  ===============HOX2a_HOX2a                              <---------ICU4        <---------AHL20(2)     ================HOX2a_HOX2a                              --------->YAB1        <---------AHL20(1)     =======================HOX2a_HOX2a                             <---------ATHB12 ----------->GT1              ========================HOX2a_HOX2a     -------->P            --------->YAB1<---------ANAC58       --------->TOE2(3) <---------ARR14(2) ----->WRKY18(1)<---------ANAC46  <----------DOF2   --------->AHL20(2)     ------>ZmHOX2a(1)------>ZmHOX2a(2)   tcaagcttaccagtttttctgtgtaagattaatcatctttttttcttgcagtaatataatttgaaacctttgttttcctctttggatcctcagatcttcc  2584600                                                                                        --------->AHL20(2)                                                                                        <---------AHL20(2)                                                                                     --------->AHL20(2)                                                                                     <---------AHL20(2)                                                                                     --------->AHL20(1)         --------->YAB1                                                         <---------AHL20(2)    ------------>CBF                           ------>ZmHOX2a(2)         --------->ARR11(3) ----------CBF                               <---------ARR11(3)          <---------ARR11(3) ===HOX2a_HOX2a                              --------->ARR11(3)         --------->RVE1(1)--------->AHL20(2) -ARR10<------------CBF                  <----------DOF2           --------->ANAC46 --------->AHL20(2) ===HOX2a_HOX2a                     <----------DOF2        ----------->TBP   ----------->GT1       -- ===HOX2a_HOX2a                  <-----------GT1<----------DOF2  --------->ANAC46   <---------AHL20(2) -->ZmHOX2a(1)                 --------->GLK1(2)--------------->AGL15   --------->CCA1(1)<---------AHL20(2)   tattgattcaattgtaatctatttcgatttgagaatcactttcctttgatcttttttaagtatatatacacaaaatatctagtaaattaaattaatatgc  2584700                                                                         ---------->DOF2                        --------->YAB1                                  --------->AHL20(2)                  <---------ANAC58                                  <---------------AGL15                  <---------ANAC58                           <----------DOF2           <-------TEIL ------>ZmHOX2a(2)                   <---------ANAC46       --------->ANAC58          <-----------GT1                             <---------TOE2(3) <---------AHL20(2)  <---------HSFB2a(2) <---------ARR11(3)          <------------CBF<---------At4g35610  --------->HSFB2a(2) --------->ARR11(3)      --------->ZAT6<---------ANAC58       --------->ANAC58 --------------------->TaNAC69(2)           <-----------GT1 <---------ANAC58       --------->ANAC46   agttcgagtaatatacgttttcttgatcttaataggtttttgttatttactctattgaagttgctttcatctaattaaagtgatcacgcttcccaaaaat  2584800                                                                                  --------->TOE1(2)                                                                               ======================            --------->ARR14(2)                                                 <------ZmHOX2a(1)            <---------ARR14(2)      <------------CBF                        <---------At4g35610          --------->LBD16           --------->YAB1                     --------->ETT(2)       -------    <---------ICU4    <----------DOF2                 <---------MYB52(1)    --------->At4g35610    --------->HSFB2a(1)        ------------>CBF   <---------At4g35610  <---------ETT(2)   --------->AHL20(2)   ccacaaacattccgaatttgaacactttgtgatgacaatattgattttgttcatctgttttttgttttttagatcgacagaggacatgggaataaaaaaa  2584900                                                         <---------ANAC58                                                      --------->TOE1(2)                                                     <---------ANAC58                                                     ------>ZmHOX2a(2)                                                     <---------ANAC58                  ---------->ID1                   --------->ARR14(2)              <---------ANAC46                     <---------ARR14(2)              <---------ANAC58                     --------->ARR11(3)        --------->DAG2                    --------->KAN4(2)       ---------->DOF2                   <---------KAN4(1)  ==========================HOX2a_HOX2a  --------->KAN4(1)  <------ZmHOX2a(2)         --------->ANAC58    <---------TOE1(2) --------->ARR11(3)         --------->ANAC46   --------->LBD16    --------->LBD16 <---------ARR11(3)         --------->ANAC58  <---------TOE1(1) <---------LBD16  ---------->DOF2 ========HOX2a_HOX2a ------>ZmHOX2a(1)  <---------KAN4(2)<---------ANAC58      <------NtERF2    ----- --->DOF2     <---------ANAC58 --------->MYB52(1) <------ZmHOX2a(1)--------->LBD16    --------->CCA1(2)   gaagatcagaaaagttccttgtccttgttgacgcaacgatggaataatccgaggatcgtgcgagtctcccgagcatttggaggcaaagatagacacagca  2585000                                                <---------YAB1                                          <---------DEAR3(1)                                          <---------At1g77200                                          --------->ETT(1)                                   <---------TOE2(3)                                   <---------TOE1(3)                                   --------->DAG2           <---------ANAC58    =================================HOX2a_HOX2a   --------->ZAT14             <------ZmHOX2a(1)----------->HVH21   <---------ZAT14          ====================================HOX2a_HOX2a   --------->ZAT18       <-----------RAV1(2)    <---------bZIP60(1)   <---------ZAT18    ----------->HVH21   <---------DREB2C(2) <---------ZAT18     --------->LBD16      <---------DEAR4(1)                     --------->ATHB12 --------->ZAT18    --------->ANAC46   <---------MYB46(3)<------ZmHOX2a(2) --------->HSFB2a(2)   <--- ----->DOF2<---------ANAC58 <------ZmHOX2a(1)   --------->bZIP60(1)--------->ANAC46              ----   aagtgtgcacagttcgtggtctccgagacaggaggataaggttgtcggtgatgacagcgatccaagtctacgaccttcaagaacgattagggctgagtca  2585100               <---------WOX13(1)             --------->ATHB12                                            <---------ZAT2         --------->ATHB12                           <---------ANAC58     --------->ZAT2       -------    ---------->DOF2                                 <---------ANAC58     ----------->RAV1(2)  ------- --------->ANAC58                              --------->ARR14(2)      <---------ALFIN1      -------- --------->ANAC58                              <---------ARR14(2) <---------GLK1(1)    ------>MYB46(1) ------At4g35610                          <---------O2      <----------DOF2            ------>MYB83 ----->At4g35610                          --------->O2   ------>ZmHOX2a(1)        <-----------GT1 <--   gcctagcaaagtcattgattggctcttagaagttgccaaaaacgacgtcgatttgcttcctcctttgcaattcccacctggttttcaccaacttaaccct  2585200                 --------->ARR14(2)                 <---------ARR14(2)                                  ------>ZmHOX2a(2)                 --------->GLK1(2)                                 <---------ARR11(3)      --------->ORA47(1)   --------->LBD16                         <---------ARR14(2)     --------->DEAR3(1)   --------->LBD16                          --------->ARR11(3)    --------->At4g35610   <---------LBD16                          --------->ARR14(2)    --------->DEAR3(2)   <---------LBD16                           <---------AGP1    <---------At4g35610 <---------LBD16                           <---------CCA1(2) -->TOE1(3)      <-----------ARR10                            <----------DOF2 -->TOE2(3)      --------->ARR11(3)                         <---------HSFC1(2)               -------- ->ZAT6          <---------ARR11(3)    ------>ZmHOX2a(2)    --------->HSFC1(2)        ----------->GT1 ---------ARR10 <---------GLK1(2)    --------->ARR11(3)    --------->GLK1(2)---------->DOF2  <-------   aatctcaccggccttggagaatcttttcccggggtcttcgatcttggaagaacacagagagaagctttggatcttgagaaaaggaaatgggttaatcttg  2585300                                                    <----------ID1                                ---                    <---------ICU4 --------->HSFB2a(2)      <----------DOF2                      <---     --------------------->WRI1    <---------HSFB2a(2)   --------->ANAC58                  <--------- ->YAB1             --------->YAB1 --------->HSFC1(1)    --------->ANAC58                 --------->At4g35610 --ICU4            <------ZmHOX2a(2)            --------->LBD16  <-----------GT1          <---------At4g35610   atcatgtgtttgatcacatcgatcatcacaaccatttctcgaattcaatccagagcaacaagctttatttccctacaattacttcgtctagcagctctta  2585400  Previous    Next  AGI:  At5g08070.1    Description:  TCP17 (TCP domain protein 17); transcription factor. similar to TCP5 (TEOSINTE BRANCHED1, CYCLOIDEA AND PCF TRANSCRIPTION FACTOR 5), transcription factor [Arabidopsis thaliana] (TAIR:AT5G60970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49166.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79810.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62458.1); contains InterPro domain Transcription factor, TCP (InterPro:IPR005333) Range:  from: 2584886    to: 2585614    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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