Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <---------AHL20(2)                             <---------YAB1                            <---------AHL20(1)                            --------->AHL20(1)                            --------->AHL20(2)                       --------->AHL20(1)                       <---------AHL20(1)                       --------->AHL20(2)                    --------->AHL20(2)   ----------->GT1             <---------ALFIN1                 --------->YAB1        <------MYB46(1)     <-----------ARR10      ----------->GT1  <---------AHL20(2)<---------ZAT6    --------->ARR11(3)                 ------>MYB46(1)     --------------->AtSPL8 <---------AHL20(2)             <---------ARR11(3)               <-------- ------->ANAC55(2)  --------->YAB1     <------MYB83       --------->CCA1(1)              <-----------GT1 --------ANAC55(2) <---------YAB1     <---------AtMYB61   --------->RVE1(1)  --------->TOE2(3)------>MYB83 ----->YAB1     <---------YAB1  <---------WOX13(1)      --------->AHL20(2)<---------GLK1(2)--------->MYB46(3) ->TEIL        --------->AHL20(2) --------->ATHB12<xxxxxxxxxxxxxxxxsmallRNA(i)    <---------DAG2   catgtattctgtaacatttttataatataatataattgatttggtgttaaaaaaaaaaaaaaatctcatcaccacataatctcaatttttgtaaccaaac  2580100                                       --------->ARR14(2)                                       ------>MYB46(1)                                       ------>MYB83                                      --------->WOX13(1)                     <---------MYB52(2)                                     --------->AtMYB61                       --------->MYB46(3)                                  <-----------GT1                ---------->DOF2         <---------YAB1           ----------->GT1        <---------WRKY18(1)          --------->MYB46(3)        --------->ICU4 <---------ZAT18         --------->AHL20(2)        ----------->HVH21    ----------->GT1--------->YAB1 -MYB59   ----------->GT1<---------AHL20(2)     xxxxxxxxxxxxxxxx>smallRNA(i) <------------MYB.PH3(2)   tagtagacttggatgttaaatctcggtttaaatgtttgaccaatccactatctcagaccggtgtaaccaaagatgtgtaacaaactctgtgatgatgaga  2580200                                                                                        <---------ANAC55(2)                                                                                     --------->ARR14(2)                                                                                     --------->ARR11(3)                                                                                     <---------ARR11(3)                                                                                     <---------ARR14(2)                                                                                   ----------->ARR10                                                                                   --------->ANAC58                                                                                   --------->ANAC58                                                                             <---------WOX13(1)<-----                                                                           --------->ATHB51<---------                                                   --------->AHL20(2)     <---------YAB1--------->ANAC55(2)                                                   --------->YAB1       --------->YAB1--------->CCA1(2)      --------->MYB59          --------->AtLEC2 --------->YAB1         <-----------------AGL3  ------   ttgttaagtaggcccaaaactaaaattgaatccatacacatatttcaaaagaataatatgttattttgggccaactataattgacaagatatgtaacgat  2580300                                                                             --------->YAB1                                                                             <---------ICU4                                                                          --------->YAB1                                       --------->YAB1                   ------------>CBF      -------                                      <---------YAB1                <----------DOF2          <------- ----ARR11(3)           --------->TOE2(3)                           --------->TOE2(3)--------->YAB1 --GT1    ----------->GT1           --------->YAB1              <---------MYB59      <---------ICU4 --->ARR11(3)           --------->TOE1(3)                <------------CBF--------->ZAT6<---------YAB1   atttgactggaagtgtaactataaaaccttaggcccaactataatggattcaaattttgtattgggcctactttaacaataatctcatcatcacagaatc  2580400                  <---------bZIP60(2)                  <---------ANAC46                  <---------ANAC58                  --------->ANAC55(2)                  <---------ANAC58                  --------->TGA1a                  <---------bZIP60(1)                  --------->O2                  <---------O2                  <---------TGA2(1)                  --------->bZIP60(1)                  --------->TGA2(1)                  <---------ANAC55(2)                <---------TGA2(2)               ----------->HVH21               ----------->TGA1              <-----------HVH21             --------->ANAC55(2)             <---------ANAC55(2)             <---------TGA1a             ==============================================bZIP_DOF             --------->O2             <---------bZIP60(2)             --------->TGA1a             <---------O2        >>>>>>>>>WRKY18     <------------CBF     ----------------------->TaNAC69(2)                 <---------ZAT18    --------->ATHB12                                    --------->ZAT14                        ------    <---------ICU4=========================================bZIP_DOF                            ------    -------->ATHB1<---------TGA1a                       --------->ZAT18                       -------   <---------YAB1----------->STF1               ---------->DOF2  <------MYB83                --------  <---------ARR11(3)                          --------->MYB46(3) <------MYB46(1)  <---------TOE2(3) -->GLK1(2)  --------->bZIP60(1)            <-----------GT1      ----------->GT1 ---------->DOF2 --GLK1(2)   <---------bZIP60(1)  --------->LBD16 *TSS  <---------ZAT14  <-----------GT1    ---------   tcaaaatcattgacgacgtgacgtctctcttctctccgagtttttgtaaccaaagcagtacactgggaggttatttatcggtttaaagtattgaaccaat  2580500   --------->CCA1(2)  <---------ARR11(3)  --------->AHL20(1)     ------>ZmHOX2a(1) >MYB83----------->HVH21--------->TOE2(2) >MYB46(1)              --------->TOE1(2) -->WOX13(1)        --------->YAB1                   --------->At4g35610         <<<<<<<<<<<<<<<<<LFY ->AtMYB61       --------->YAB1                      <---------At4g35610  <---------ARR11(3)       -- >MYB46(3)  ----------->GT1                <----------DOF2--------->LBD16 --------->ARR11(3)       <-   ccaatatatgagaccggtttaataatccttcgatttcgattcgaactttggtttcatctccccaaatcgaagcgaaggtctctcaacaatggcgaaatca  2580600               ------>ZmHOX2a(1)         --------->ATERF1(1)         <---------At4g35610         <------NtERF2         --------->At4g35610        ------>NtERF2        <---------ATERF1(1)        <---------DEAR3(2)        <---------RAP2.3(1)        <---------ERF1       <---------RAP2.6(2)       <---------RAP2.3(3)       <---------DEAR3(1)                                                    ----------->HVH21       <---------RAP2.3(2)                                                 <---------At4g35610      <------NtERF2                                                        --------->At4g35610      --------->ATERF1(1)                                           <---------ARR14(2)     <---------RRTF1(1)                                             ------->TEIL     ------>NtERF2                                                  --------->ARR14(2)     <---------ATERF1(1)                                        --------->At4g35610     <---------RAP2.3(1)                 --------->REM1(1)      <---------LBD16     <---------DEAR4(2)                 <-------TEIL           --------->MYB52(1)     <---------ERF1                     --------->SPL7       <------ZmHOX2a(2)    <---------RAP2.3(3)               --------->At5g28300   --------->ARR11(3)    <---------DEAR3(1)                <------NtERF2         <---------ARR14(2)    <---------RAP2.3(2)              <---------DEAR3(2)     --------->ARR14(2)   --------->ATERF1(1)        --------->TOE1(3)  --------->ANAC58 ----------->HVH21 --------->ETT(2)             --------->TOE2(3)  --------->ANAC58 --------->LBD16 <---------ETT(2) <---------ANAC58   ----------->GT1        <---------ARR11(3)                  <---- ------->REM1(2)  <---------ANAC58  --------------->AtSPL3 <---------At4g35610                  <---- ----------HVH21  <---------ANAC46  <---------DEAR3(1)     --------->At4g35610     --------->LBD16   gtgtcgacggcggcttcctcgcttgtgcaaaaccttaggcggtacatcaagaagccatggcagatcaccggaccttgcgctcacccagaatacctcgaag  2580700                                                                        --------->ARR14(2)                  <-----------ARR10                                  --------->TOE1(1)                  <---------ARR14(2)      <---------WOX13(1)         --------->TOE2(1)           --------->ATERF1(1)    --------->ANAC46                  =============HOX2a_HOX2a           <------NtERF2          --------->ANAC58                  <---------LBD16     --------->ANAC46         ----------->HVH21        --------->ANAC58        <---------ANAC58  --------->LBD16         <---------DEAR3(1)      <---------LBD16          --------->YAB1<---------ARR14(2)      --------->DAG2          ------>NtERF2               <---------ANAC58------>ZmHOX2a(2)    ---------->DOF2        <---------At4g35610      --------->ANAC58--------->LBD16  <---------ARR14(2) -----At4g35610   --------->ARR14(2)   <---------YAB1    <---------ATHB12<------ZmHOX2a(2) -----ZAT2------>NtERF2    --------->At4g35610      --------->ANAC58------>ZmHOX2a(1)--------->ARR14(2)   ctgttccaaaggcgacggagtatcgtctccgatgccccgctacgattgatgaagaagcaatcgtgccttcctcggatccagagaccgtatacaacatcgt  2580800                                     --------->TOE1(2)                                    =============================HOX2a_HOX2a                                    <---------LBD16                         --------->RAP2.6(2)                         ------->GAMYB--------->LBD16                         --------->DEAR3(1)                        --------->DEAR3(2)   <---------ANAC55(2)                 --------->ZAT14    ------>ZmHOX2a(2)                 <---------ZAT18   <------ZmHOX2a(2)               --------->At4g35610 ==============================HOX2a_HOX2a               <---------At4g35610--------->ARR14(2)            <------ZmHOX2a(2)     <---------ARR14(2)           --------->ARR11(3)   --------->DEAR3(1)           <---------ARR11(3)<---------ALFIN1<---------ANAC55(1)          --------->GLK1(1) --------->DEAR3(1)                                                     --          <---------GLK1(1) <---------MYB55(2)                          <---------At4g35610        <-         ----------->ARR10  --------->MYB46(3)                          --------->At4g35610        <-        <------NtERF2   <------------AtMYB77 --------->ANAC55(2) --------->ALFIN1                  <-   --------->ANAC58     --------->MYB46(3)   --------->ANAC55(1)<-------MYC3                       --   --------->ANAC58   <---------ARR14(2)    <-------TEIL  <------ZmHOX2a(1)                        --   --------->bZIP60(2)--------->ARR14(2)  --------->ARR14(2)    ------->MYC3                       <-   --------->ANAC46  <---------ARR14(2)   <---------ARR14(2)<---------WRKY12 <---------YAB1        <-  <---------LBD16<---------ZAT14--------->MYB46(3)  <---------TOE2(3) <-----------RAV1(2)        <---   ataccacggcagagatcagcgcagaaaccgcccaccgatccggcgatacgtattgacgaaggacaacgtggttcagatgatgaacgagaagaagagtttt  2580900                                                              --------->ALFIN1                                                            <---------ANAC46             --------->ICU4        --------->GLK1(1)       --------->AtMYB61         <-------MYC3              <---------At4g35610   --------->HSFB2a(2)       --------->AtMYB61            ------->MYC3              <---------ANAC55(2) ------->TGA1a              --------->MYB46(3)         <---------ANAC55(2)          --------->ANAC55(2) --------O2               <---------WRKY18(1)        --------->CCA1(2)              --------->At4g35610 --------ANAC58        --------->ANAC55(2)    --------->ARR14(2)                    ----------->GT1 --------TGA1a  <---------TOE1(3)             <---------ARR14(2)   --------->ATERF1(1)   <---------YAB1 ------->O2 <---------HSFB2a(2) <---------ALFIN1     <---------GLK1(1)            <-----------RAV1(2) ------->bZIP60(1)     <---------ANAC58      <------ZmHOX2a(1)<---------ANAC46 --------->YAB1 --------bZIP60(2)     <---------ANAC58   <------ZmHOX2a(1)--------->ALFIN1   --------->ICU4 --------ANAC58 <---------TOE2(3)--------->ZAT14    --------->ARR14(2)  <---------HSFB2a(2) --------GT1--------->HSFB2a(2) ----------->RAV1(1) <---------ARR14(2)  --------->HSFB2a(2)   gacgtctcggacttccctaaggtttacttgaccaccacagtcgaggaggatttggatacgcgtggtggaggctacgagaaataatcaggtgattatcaaa  2581000  Previous    Next  AGI:  At5g08060.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK93975.1) Range:  from: 2580450    to: 2582565    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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