Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                --------->LBD16                        --------->SPL7                                  ----------->GT1                       <------NtERF2                                   <---------ANAC46                       <---------MYB52(1)                           <---------DEAR3(1)    --------->HSFB2a(2)                      <-----------HVH21                             --------->ALFIN1      <---------HSFB2a(2)                     >>>>>>>>>AtERF-3                    --------->ANAC58<------NtERF2   <---------TOE1(1)                     >>>>>>>>>AtERF-4                    --------->ANAC58--------->At5g28300                     --------->RAP2.3(2)               ---------->DOF2<------NtERF2      <---------TOE2(1)                     --------->RAP2.3(3)            --------->TOE2(3)------>NtERF2      --------->SPL7                    --------->RAP2.3(1)   --------->ANAC46     --------->MYB52(1)     <---------SPL7        <---------YAB1<---------RAP2.6(3) --------->ANAC58   --------->ANAC58    --------->ANAC46<--- --------ID1    ----------->ARR10         --------->ANAC58   --------->ANAC58   --------->MYB46(3)   gagccaagttaagatggtgagagccgtcagaccggaggtacctccagccattaaacttaaagcaagaacggtggcggtaatacccgctggtacgagaaca  2397000                                   --------->ANAC46                                   --------->ANAC58                                 --------->MYB52(1)                               <---------MYB52(2)                              <---------At4g35610                              --------->At4g35610                              <------NtERF2                             ------>NtERF2                            <---------RAP2.6(2)                            <---------ANAC46                                              --------->At4g35610                            <---------DEAR3(1)                                            <---------At4g35610                           <------NtERF2                                ----------->RAV1(1)  <-------                    <---------ANAC46                                  --------->At4g35610<---------RAP2.3(1)                   <------NtERF2 <---------DOF5.7(2)                 --------->ANAC58    ------>NtERF2                --------->At4g35610--------->ANAC58                 --------->ATERF1(2) <---------RAP2.3(2)             ---------->DOF2<---------RAP2.3(2)                     <---------ATERF1(2) <---------DEAR3(1)         --------->ANAC58  --------->ATERF1(1)                 --------->DEAR3(2)       <---------RAP2.6(2)         --------->ANAC46 <---------RAP2.3(1)                <-----------GT1    <------ZmHOX2a(1)         --------->ANAC58 <---------ATERF1(1)           <---------ZAT6<------NtERF2    <---------LBD16 ------------------WRI1  <---------DEAR3(1)           ----------->GT1--------->ANAC58 <-----------RAV1(1)   gggctgaatacaaggaagagcggcatggaggcggctaacgccatggctgtgccaactagtgataaaccggccagcaacaagaggaatactgcggctgtag  2397100                                            ------>ZmHOX2a(2)                                           <------ZmHOX2a(2)                                          <---------ARR11(3)                                   <----------DOF2                      --------->TOE1(3)   --------->ARR11(3)                                   ------       --------->ANAC58          <------NtERF2                                                 <-----       --------->ANAC46         <---------DEAR3(2)                                             <-----       --------->ANAC58         ------>NtERF2                                             -----------   <---------MYB52(2) --------->TOE2(3)  <---------GLK1(1)      <---------ANAC58  <---------AHL20(2) --ZAT14     --------->YAB1    <---------DEAR3(1)               <---------ANAC58 <---------YAB1------   aggcaaaaaacgctatcaaaacacccttaatcgtcggctttggagatcgtaatctctcgcgttttttcttgcgaaacaacatttttaatggccagaaaat  2397200                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                =====                                                                                                =====                                                                                                <----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                              <------                                                                                           --------->ANAC58                                                                                           --------->ANAC46                                                                   ------>ZmHOX2a(2)       --------->ANAC58                                                                  <------ZmHOX2a(2)      <---------AtLEC2 <---------ANAC46         <---------ANAC46                       <---------AGP1         <-------TEIL <---------ANAC58       <---------ANAC46                         --------->AGP1         <---------ZAT14 <---------ANAC58    <-----------RAV1(1)                         --------->ARR11(3)     --------->ZAT18 --->ARR11(3)    <-------GAMYB              ==============================HOX2a_HOX2a   --------->ZAT14 ----ARR11(3)   <------MYB46(1)             <------ZmHOX2a(1)    <---------ARR11(3)  <---------ANAC58 ----AHL20(1)   <---------MYB46(3)          =============================HOX2a_HOX2a <---------ANAC46 >GT1           <------MYB83   --------->GLK1(1)          <---------YAB1             <---------ANAC58 --->AHL20(1)   ----------->GT1<---------GLK1(1)       <---------AHL20(2)     <---------AtMYB61------   attccttgttttatcggatggttatgttgtgggatttcatgaattaggagagtggattttatgaatagatctagagaggtatggtctacgtgcacggcac  2397300     ----------------->AGL1   <-----------GT1 <---------DAG2 <----------DOF2 ----MYC4 --->MYC2 --->MYC3 ----MYC2 ----MYC3 --->MYC4 ----PIF4 --->PIF4   <---------ANAC58 ----PIF5   --------->ANAC55(2) --->PIF5   --------->ANAC46 ======================================MYC_MYB  --------->TOE1(3) ===========bZIP_DOF                      --------->ANAC46 -----TGA1a <---------ANAC58          <----------DOF2 ---->TGA1a <---------ANAC55(2)     --------->At4g35610                                           <-- ---->ANAC55(2)                <-------GAMYB<---------MYB52(1)                                    <-- -----ANAC55(2)               <---------MYB46(3)--------->TOE2(3)        <-----------GT1          <-- ------OsbHLH66--------->MYB52(1)   <---------At4g35610              <----------DOF2          <------ ------>OsbHLH66          ----------->HVH21 --------->DOF5.7(2)  ------>ZmHOX2a(1)    --------->STY1(2)   gtgctttacctcatgcgtaacgatgcaagtgactgttgagctctacgttacctcaatgcctcttctcctctcttttttctgtttccctagctaattttgt  2397400                                                                                                   <-                           <---------ANAC58                                                       <--                           <---------ANAC46                                                      <---                           <---------ANAC58                                                    <-----                        *TSS                                                                   <-----               <---------ANAC58              ----------->GT1                                   <-----  <-----------GT1   ------>ZmHOX2a(1)      <---------ANAC58 <------MYB46(1)            <---------ANAC58 ----MYB83     <---------ANAC58            <---------ANAC58 <------MYB83           <------------CBF<- ----MYB46(1) --------------->AtSPL8       <---------ANAC46<---------TOE1(2)     --------->ARR11(3)<- -------MYB46(3) ---------->ID1         <----------DOF2   <--------P    <-----------TBP<---------ANAC58 -----RAV1(1)<-----------GT1        ------>ZmHOX2a(1)   <---------REM1(1)  <------------CBF   <------   tggtttaccacattttttcgtcctctattccttgtttcctcgctttcttgtaaaatagttgtaggtattttggtttatattgggatattgtttgtgtagg  2397500                              --------->ATHB12                             <---------YAB1 -----MYB46(1)           --------->YAB1 -------AtMYB61         <---------YAB1 -----P                --------->AHL20(2) -MYB83                --------->AHL20(1) ----MYB46(3)          <---------AHL20(2)                     <---------YAB1                   ------ -MYB46(1)            --------->YAB1                     <---------ICU4                        <----- -----MYB83          <---------YAB1             <-----------GT1                                ------ --------MYB46(3)  --------->YAB1     --------->YAB1   <---------ARR11(3)        <----------DOF2 ---AtMYB61       <---------YAB1<---------WOX13(1) --------->TOE2(3)   <---------WOX13(1)     -------   ttggtttgactaatctagttttcattataatatgattgaattataagttataaccaaaatcattttgattcggattgactagactttttttcaaaaaaaa  2397600        ------>ZmHOX2a(2)       <------ZmHOX2a(2)      --------->AGP1      <---------AGP1                         <---------ARR14(2)      <---------ARR11(3)                     --------->ARR14(2)      --------->ARR14(2)                  <---------ANAC58      <---------ARR14(2)                  <---------ANAC58      --------->ARR11(3)                  --------->ANAC55(2)     <---------CCA1(2)                    <---------ANAC55(1)    --------->MYB59                       <---------ANAC55(2)                                <-------    ----------->ARR10                     <---------ANAC46  <---------AHL20(2)              --------- --->AHL20(2)                          <---------MYB52(1)----------->GT1           --------->ANAC55(2) ----AHL20(2)        <---------YAB1  <---------ANAC58   ----------->GT1--------->At5g28300  <-------- --->AHL20(1)  <---------AtMYB61     <---------ANAC58  <-------MYC3   ----------->GT1   <---------REM1(1) -->AHL20(2) <---------ANAC46       <---------TOE2(3)  ------->MYC3<---------AtLEC2<---------ANAC55(2)   attagttagatcttggtgtggttttgatagagtttgtttacgttgcgtattcttacatgtgttaaatttccatggtaaaatgaataagtattgtagctaa  2397700                            <-------TEIL                        <---------------AtSPL8                        --------------->AtSPL8                        --------------->AtSPL3                        <---------TOE2(3)                   ------>MYB46(1)                   ------>MYB83                  <---------------AGL15                 ----------------->AGL3     ----------->GT1    <---------TOE1(3)                          <---------ZAT6 --MYB59         <-----------------AGL3                 <------MYB83                ---------->DOF2 >At4g35610      <---------MYB59                        <------MYB46(1)    --------->MYB52(1) -At4g35610   <------ZmHOX2a(1) --------->AHL20(2)     --------->MYB59   --------->MYB46(3)   ctttgaactgttataaggacctaattaaggtacataaattgttagtcagtttcaagttaggtttagtaagtgttaacaaacagttttaaagtcgagttct  2397800                                                                             <-----------GT1                                                       --------->WOX13(1)  --------->HSFB2a(1)                                                     <---------------------WRI1          --------->GLK1(1)                                                    --------->TOE2(3)      <---------HSFC1(2)                                                   --------->YAB1          <---------HSFB2a(1)              <---------YAB1                 --------->YAB1                --------->HSFC1(2)       <----------DOF2   --------->ZAT14    <------ZmHOX2a(2)   ---------->DOF2  <---------MYB52(1)   ctcaaacttcttttttttgataaaaactgctctcaaacttatggcgatcagaatcatcaattagaccaaagagaagaattttcgttatccgatttccaaa  2397900  Previous    Next  AGI:  At5g07571.1    Description:  similar to GRP20 (Glycine rich protein 20), nutrient reservoir [Arabidopsis thaliana] (TAIR:AT5G07560.1); similar to pollen coat oleosin-glycine rich protein [Arabidopsis arenosa] (GB:AAR15447.1); contains InterPro domain Oleosin; (InterPro:IPR000136) Range:  from: 2396433    to: 2397424    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g07572.1    Description:  unknown protein Range:  from: 2396709    to: 2397549    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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