Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        <---------ZAT18                                                                   <---------ANAC58                                                                   <---------ANAC46                                         <---------AHL20(2)    <---------ANAC46                                         --------->AHL20(2)    <---------ANAC58                                   <---------YAB1         --------->MYB52(1)           ------>ZmHOX2a(1)   <-------GAMYB             <-----------GT1   <---------ARR14(2)         <---------MYB46(3)    <---------AHL20(2)--------->ZAT18             ---   --------->ARR14(2)         ----------->GT1   ----------->GT1<---------ANAC58            ----------  <---------CCA1(2)     --------->DAG2   --------->AHL20(1)<---------LBD16             --------->AHL20(2) --------->LBD16       ---------->DOF2  --------->AHL20(2)<---------At5g28300   <-------TEIL      <-- ---->P   --------->TOE2(3)--------->ALFIN1    <---------TOE2(3)   <---------ANAC58    <---------AHL20(2)   acccgtatatttcctaaacacaaaaaaaagtgtggttataaaaaaaattgtggtttaatttaccggcttgtgtgcgcatgcatacatattaaaaaaagaa  2390700                                                                     <---------ATERF1(1)                                                           --------->ANAC46                                                           --------->ANAC58 ------>NtERF2                                                      --------->ANAC58     --------->LBD16                        <---------ANAC46              --------->ANAC58   --------->ATERF1(1)                        <---------ANAC58              --------->ANAC46   <---------LBD16                        <---------ANAC58              <---------ETT(1)--------->ATERF1(1)    ------->TEIL        <---------ANAC55(1)      ----------->ARR10  --------->ALFIN1  --------->TOE1(3) <---------YAB1       <---------AHL20(2) <---------YAB1  <---------ALFIN1--------->SPL7   --------->ANAC58 ------>ICU4    <-------GAMYB            <---------TOE2(3) --------->ANAC58------>NtERF2  --------->ANAC58 >DOF2      <---------LBD16       ----------->RAV1(1) ----------->HVH21 ------>NtERF2----------->RAV1(2) -------ATHB51 ----------->GT1   ----------------->AGL3<-----------HVH21<---------ATERF1(1)     -----   attatgaatgtttttgggggttaattacttgtagagccacattaagatggtgagacccgacacaccagaggtgcctccggccattaaacctgaagcaaga  2390800                                                                                    <-------GAMYB                                                                                    <-----------HVH21                                                                                   <---------DEAR3(2)                                                                                   <---------MYB46(3)                                                                                 <---------LBD16                                                                                ------------>AtMYB77                                                                               ----------->HVH21                                                                               --------->ALFIN1                                                                             <---------ATERF1(1)                                                                            <---------DEAR3(1)                <---------ANAC46                                         ====================MYC_MYB               <---------LBD16                       <---------ANAC46    --------->ANAC58               --------->LBD16                      <------NtERF2        --------->TGA1a        -----              --------->ANAC46                    <---------RAP2.6(2)    --------->O2          ------      <------NtERF2                              --------->RAP2.6(3)     --------->ANAC58     <------  <---------MYB46(3)                            --------->MYB52(1)      <---------LBD16     --------- --------->ALFIN1--------->LBD16              =====================================bZIP_DOF<---------ARR11(3) <---------AtMYB61   <-------TEIL             ---------->DOF2          <---------ALFIN1    --------->ARR11(3) ---->YAB1   <---------LBD16                <------ZmHOX2a(1)   <---------ARR14(2)<---------ANAC46---   atagtggtggcaatacccgcgggtacaagaacggggctaaaaacgaggaatagcggcatggacgcgaatagtgccacggctgtgccggttagagatatac  2390900     ----------->RAV1(1)   --------->At4g35610                                                          <-----------ARR10   <------NtERF2                                                                <---------ARR11(1)  --------->ANAC58                                                              --------->ARR14(2)  --------->ANAC58                                  ------->GAMYB               ------->TEIL   ------ --------->ATERF1(2)                         <------NtERF2                      <---------ARR14(2) <---------ATERF1(2)                        <-----------HVH21       <----------DOF2         --------- ---->RAP2.6(3)                        --------->DAG2             <------NtERF2<---------ARR14(1) --->MYB52(1)                         ---------->DOF2            <---------DEAR3(2)      <------NtERF2 -----GT1                      ----------->GT1--------->YAB1     ------>NtERF2 <---------CCA1(2)----- >CCA1(2)              <---------At4g35610  <---------RAP2.6(3) <---------DEAR3(1)      <-----------HVH21 ------>ANAC46         --------->At4g35610 --------->RAP2.6(2) --------->ATERF1(1)     <---------DEAR3(1)   cggccagcaacaagaggcatattgcagcttcagtggcaaaaaaagccgtcataacacccttgagcgtcggcttttgtcttcgtatctcgtcgtcgcgacg  2391000                                            <---------ANAC58                                            <---------ANAC58                                            <---------ANAC46                                      <------NtERF2       <----------DOF2               ------>NtERF2    <-----------GT1                 --------->RAP2.6(2) --->DEAR3(1)                      <---------ZAT18           --------->ATHB12                     <-- -->HVH21                     ---------->DOF2               <---------YAB1                     <----- ->NtERF2          ---------->DOF2 --------->ZAT18   <---------GLK1(1)      *TSS               ------   acgttttttctttccaaaaatcaaagagagtggaaagggcgccatagcttgtttgatatcggatgattgtggaatttcatgaattagaagagtggatttt  2391100                                                                                    <-----------HVH21                                                                                   --------->ANAC58                                                                                   <---------ANAC55(2)                                                                                   --------->ANAC46                                     <---------ANAC58                              ==================                                  <-------PIF5                                     --------->ANAC58                                  ------->PIF5                                     --------->ANAC55(2)                                 ----------->RAV1(2)                               <---------bZIP60(1)                            --------->ANAC46                                       --------->bZIP60(2)                            --------->ANAC58                                       --------->bZIP60(1)                         --------->ZAT18                                           <---------TGA1a                         --------->ZAT14                                           --------->O2                         <-------TEIL<---------ANAC58                              <---------O2                         <---------ZAT14                                           --------->TGA1a                      <---------ANAC58                                             ==================                      <---------ANAC58   --------->ANAC46                       --------->TGA2(2)                      <---------ANAC46  -------->P                             <-----------TGA1               <---------AtMYB61 <---------At4g35610                           <-----------HVH21               ----------------------->TaNAC69(2)                             --------->bZIP60(2)             --------->ALFIN1    <---------ZAT2                               --------->ANAC46             <---------ANAC58    --------->At4g35610                          --------->ANAC58          <---------AtMYB61 --------->ANAC58                                  --------->ANAC58          --------->ALFIN1<---------AtLEC2                              --------->At4g35610 -------TOE2(3)--------->ALFIN1 <---------ATERF1(1)       <---------ANAC58<----------DOF2 ----AHL20(2)<---------ANAC58   ------>NtERF2             <---------ANAC58===================bZIP_DOF --->AHL20(2)<---------ANAC46  <---------ALFIN1 --------->ANAC46        <---------At4g35610   aatgaagagagagtggtgtggtctacgtgcacggcacctgcttaccccatgcgaaacgatgcgagtgaatgttgagctctacgtcacgtcaatgcctctt  2391200                                                                                                    <                                                                                                    <                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                          <------MYB46(1)                                                                                          <------MYB83                                                                                         --------->MYB111(2)                                                                                         <---------MYB46(3)                                                                                         --------->MYB59                                                                                         --------->MYB46(2)                                                                                         --------->MYB111(1)                                   ----------->GT1                                      <---------MYB55(1)                                 <---------ANAC58     <------MYB46(1)             <---------MYB52(1)<             --------->AtLEC2    <---------ANAC46     <------MYB83          <---------GLK1(1)      --     <----------DOF2             <---------ANAC58    <---------TOE1(2)      --------->GLK1(1)      <- <----------DOF2              <----------DOF2       <--------P             --------->ARR14(2)    <--- ===========bZIP_DOF       <---------ALFIN1       <---------REM1(1)        <---------ARR14(2)   <---- ===========bZIP_DOF   <-----------HVH21  --------->AHL20(2)           <---------LBD16  <--------P<--   cgtctttctttcttcatgcgaaaatggtcacactttcttgtaaaaaaaatagttgtaggtattttggtttattttcggatttcggtttgggtaggtaccg  2391300        --------->ATHB12   <---------MYB46(3)   <------MYB83   <------MYB46(1)  <---------AtMYB61 <--------P ---------ANAC58 ---------ANAC58                                                                         <------MYB46(1) -----MYB46(1)                                                                      <---------ANAC46 --------MYB46(3)                                                             <---------AHL20(1) --------DEAR3(2)                   <---------WOX13(1)                        --------->AHL20(1) ------->MYB55(2)                 --------->ATHB12                     <------MYB46(1)   <------MYB83 -------GAMYB                    <---------AHL20(2)---------->DOF2     <------MYB83 <---------ANAC58 ------->MYB52(2)          --------->AHL20(2)   --------->TOE1(3)    <--------P<---------AHL20(2) -----MYB83             --------->TOE2(3)    <-----------GT1       <---------MYB46(3) <---------MYB52(1) ------MYB52(1)         --------->TOE1(3) <---------ICU4      <---------AHL20(2)    <---------ANAC58 ---GAMYB              ----------->GT1    --------->YAB1  --------->ICU4      <---------ARR11(3) -------AtMYB61<---------ZAT14   <---------YAB1 --------->TOE2(3)XXXXXXXXXXXXXXXXXXXX>MIR860     ----   ttggttggtttgattagttcagttttcgttaaaatttgattgaattataacctcaaagtcatttttaatcggttggactatatatttcgtttggttcaat  2391400                   <---------YAB1                                                    <---------AHL20(2)   --------->AHL20(2)                                                               --------->AHL20(2)   <---------AHL20(2)                               <---------ANAC58                <---------AHL20(2)  --------->AHL20(2)--------->YAB1            <---------YAB1                 ----------->GT1       -- ----->YAB1  <---------AtMYB61       <-------GAMYB  <---------ANAC58       <---------ZAT14        <--   tagatttaatttgctgtggttttgataagagtttgtttcggttgtgatattatagcttacatgttttaaaaatcgaatacagtgaaataaatgaataagt  2391500                                                                     ---------->DOF2                                                            ------->TEIL                                                            --------->ARR14(2)                                                            <---------ARR14(2)                                                           <---------CCA1(2)                        <         <---------WOX13(1)           --------->ZAT14   ===============================HOX2a_HOX2a <-        <------------CBF              --------->ZAT18   ------>ZmHOX2a(2)                       <----   <-----------GT1     <------------CBF                --------->At4g35610             <-----------GT1 <---------WOX13(1)   <------ZmHOX2a(1)        --------->YAB1   ------------>CBF<------ZmHOX2a(1)<--- ------->ATHB12     <---------TOE2(3) <---------ZAT14  ================================HOX2a_HOX2a -- -------YAB1    <------------CBF      <---------ZAT18  <------ZmHOX2a(2)       ----------->GT1 ------   atgattaactaattgaaatattgaggattgaaaactcgagtgctctcaaacatagcgatctgaatcttcaatagagcaaataggataattttcggcatcc  2391600  Previous    Next  AGI:  At5g07560.1    Description:  GRP20 (Glycine rich protein 20); nutrient reservoir. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G07571.1); similar to pollen specific glycine-rich protein GRP20 [Arabidopsis lyrata subsp. lyrata] (GB:AAQ56105.1); contains InterPro domain Oleosin; (InterPro:IPR000136) Range:  from: 2390208    to: 2391076    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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