Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    --------->AHL20(2)                  --------->YAB1         <-------MYC3         ------->MYC2<---------AHL20(2)         ------->MYC3<---------AHL20(1)                             ------->TEIL   <-------TEIL  <---------YAB1                                   --------->ZAT18 -GAMYB  <-------MYC2--------->AHL20(1)                           <---------ZAT18 ->MYB52(2)     --------->AHL20(2)                      --------->CCA1(2) --MYB46(3)  <---------ANAC46<---------ANAC55(2)      <---------GLK1(1)    <---------TOE1(2)   gtagatgcacacatgccttataatatatgatatgtaagacgtttgataaatagtggatatatgagatgtgcacctcgagggtttgaatagggttttcaaa  2386900                                                                                     ------>ZmHOX2a(1)                                                                               <---------ALFIN1                                                                              <---------MYB52(1)                                                                              <------NtERF2                                                                             ------>NtERF2                                                     <----------ID1          <---------RAP2.6(3)                                      --------->AHL20(2)                     <-----------TGA1                      --------->YAB1  --------->AHL20(1)                    <---------ANAC58---------                      ----------->GT1 <---------AHL20(2)                    <---------ANAC58<--------                 --------->AHL20(1)   <---------AHL20(1)                    --------->bZIP60(1)   ---                 --------->AHL20(2)  --------->AHL20(2)                     <---------bZIP60(1)   <--          ----------->GT1    --------->AHL20(2)  ---------->DOF2            --------->RAP2.6(2)<-----         --------->AtLEC2<---------AHL20(2) <-----------GT1    <---------YAB1<-----------HVH21------- --------->TOE2(3) --------->YAB1    <---------AHL20(2)  ---------->DOF2    <---------ATERF1(2)------ <----------DOF2--------->YAB1   --------->AHL20(2)  ------------------------>ANAC81 --------->STY1(1)   aaactttagtcatggaaaaaataatagtaaattgaataaataaattttacttaaagagccaaagtatgagagcaaatgccgtcactcctagggcaactgc  2387000                                                 --------->GLK1(2)                                                 <---------ARR14(2)                                            <---------TOE1(1)                                            <---------TOE2(1)                                           --------->SPL7                                         <---------SPL7                                        <------MYB46(1)                                        <------MYB83  <--------P                           <---------MYB46(3) >At4g35610                            <---------------AtSPL3                           --------->MYB52(2) -At4g35610                           <---------ANAC58                     <---------ANAC46 ------>At4g35610                     <---------ANAC46                     --------->ALFIN1  -------- -------At4g35610  ---------->DOF2    <---------ANAC58        <----------ID1          <--------P ----ZAT14        <------ZmHOX2a(1) <---------MYB46(3)      <---------At4g35610    <---------TOE1(3) >GAMYB <---------ALFIN1       <---------ZAT14   --------->ARR14(2)  --------->DAG2<---------YAB1 --->ZAT14  ------>NtERF2     <----------DOF2   <---------GLK1(2)   ---------->DOF2<---------TOE2(3)   agcggtagcccctccgactaggaaagtagtggctatagtggctggtacgagaatcggactgaagatgacaaaaagcggtgtggctatggttagtcccaca  2387100                                                                ----------->RAV1(2)                                                                --------->At4g35610                                                              <---------ALFIN1                                                      <------NtERF2                                                    <---------DEAR3(1)                                                 --------->ANAC46           ----------->GT1                       --------->ANAC58       --------->DEAR3(1)                        --------->ANAC58      --------->ANAC58                          --------->SPL7------->GAMYB      <------NtERF2 --------->LBD16             <---------LBD16--------->MYB52(1)            --------      --------->ANAC58    --------->ZAT6  <---------At4g35610--------->MYB46(3)           --------->ANAC58 --->RAV1(1)      <---------LBD16      <---------ZAT14--------->At4g35610                 --------->ANAC58   attgaggcaccgaaggttataccggcgaacactaagaagactacagatgctacggcagcgataaccacctgaaaaaactgtacaactgggataagaaacg  2387200                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                <----                                                                                                <----                                                                                               ------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            <--------                       ------>ZmHOX2a(2)                                                   <---------                     --------->ARR11(3)                                                    <---------               <---------ANAC55(1)                                                        <---------ANAC46               <---------YAB1<-----------RAV1(1)     <-------GAMYB                       --------->ALFIN1               <---------ANAC58                     <---------MYB46(3)                 <---------ANAC58               --------->ANAC55(2)                  --------->MYB52(2)        ---------->DOF2<-------               <---------ANAC58                   *TSS        --------->CCA1(2)        <---------ANAC58               <---------ANAC55(2)             <---------TOE2(2)           <---------YAB1<---------AtMYB61 ->CCA1(2)     <---------ANAC46                <---------TOE1(2)      <----------DOF2  <---------ANAC46   agagcattttgtgagttacgtttgatctctattgttgctactctaatcggatgtttgttgaaagatagagggcttttatgaaaagagttgtgtggtgtac  2387300      --------->SPL1(2)      --------->SPL7    <---------SPL7  <---------------AtSPL3  --------->ANAC58                                          --------->DOF5.7(2)  --------->ANAC46                                          <---------MYB52(1)  --------->ANAC58                                         --------->TOE2(3) ------TEIL                                            ------>ZmHOX2a(2) --------ZAT14                                        <------ZmHOX2a(2) ------->ZAT18                                        --------->CCA1(2) ------->ZAT14                                       <---------ARR11(3) -----ANAC58                                         <---------ARR14(2) -----ANAC58     <-------TEIL                        --------->ARR14(2)                ----------->RAV1(1) ->TEIL--------->ANAC58                              --------->AGP1                   --------->ANAC46 -ANAC46       ------->MYC2                          >>>>>>>>>GATA-3           --------->ZAT14 -ANAC58       <-------MYC3                          --------->ARR11(3)        <---------ZAT14 -ANAC58   <---------ZAT18                ----------->GT1  --------->TOE1(3)   <---------ZAT18 -REM1(1)  <-------TEIL    --------->AtLEC2          >>>>>>>>>GATA-2           --------->ZAT18 ------AtSPL3  ------->MYC3--------->ANAC46          >>>>>>>>>GATA-4--------->ANAC58--------->ANAC46 ------AtSPL8  <-------MYC2--------->ANAC58          >>>>>>>>>GATA-1--------->ANAC46--------->ANAC58 --SPL7--------->ANAC58    --------->ANAC58 --------->AHL20(2)      --------->ANAC58--------->ANAC58   gtgcacggtacggtacacatgcatgctccatgcaaaacgatgggaagtaaatagagatctacgttaactcacgccaaattgtgcacacacaacacaaaca  2387400                                                       <---------TOE2(3)                           --------->ATHB12           <---------DOF5.7(2)                        ----------->RAV1(2)         --------->DOF5.7(2)                        <-----                      --------->ANAC58             <----------DOF2                             <-----                      --------->ANAC46            <---------ANAC58                      <---------ARR11(3)                      --------->TGA1a        <-----------RAV1(1)                        <---------AHL20(1)                      =============================bZIP_DOF                 --------->ARR11(3) ------                      --------->ANAC58       <---------ANAC58               <---------ARR11(3) <-----                      --------->O2           <---------ANAC58              --------->YAB1<---------AHL20(2)                  <-----------HVH21        <---------ANAC46  <---------ANAC46     <-----------GT1                --------->DAG2   <---------ANAC58 <---------ANAC58        <---------YAB1--------->AHL20(1)               ---------->DOF2   <---------ANAC58 <---------ANAC46        <---------TOE1(3)  <-------               =================bZIP_DOF<----------DOF2<---------TOE1(3)  <---------TOE2(3) ---------   aaaaacaaaaacaaaaaaaaagtcacgcctgatttgcttcttcttttgtgtggcgttaacgtttcatgtattgtttaagataattttctatatatttaat  2387500                                                                                         <---------ICU4                                                                                         --------->YAB1                                         <---------MYB52(1)                              -------->HAHB4        <---------ICU4                  <-------GAMYB               --------->YAB1      <---------ATHB51       --------->AHL20(2)              <---------MYB46(3)           <-----------GT1     --------->ICU4       --------->ICU4                 <-------TEIL               <--------HAHB4    ----------->GT1       <---------AHL20(2)           --------->ARR14(2)           --------->ATHB51  --------->ANAC58       <---------ATHB51             <---------ARR14(2)           <---------ICU4    --------->ANAC46 ----------->GT1             --------->LBD16                    <---------YAB1     <---------ANAC55(2) ----TOE2(3)                <---------RAP2.6(2)                 --------->ICU4     --------->ANAC55(2) ----------AtSPL8          <---------LBD16                    --------->YAB1       --------->ANAC55(1) --------->AtSPL8          <-------TEIL--------->MYB52(2) ---------->DOF2          --------->ANAC58 ----------AtSPL3        <---------ARR14(2)              <---------WRKY38(1)      <-------TEIL --AHL20(2)              --------->ARR14(2)              <---------WRKY45     <---------------AtSPL3 >AHL20(2)      ----------->GT1  <-----------RAV1(2)     <---------WRKY12     <---------------AtSPL8   gtacgataaataattaagaagttacaaggtccggctcaggtccgttgtacttgtttcagtcaaagcataattacaacttacaagtacgtaataatgaccc  2387600                                                             <---------ANAC58                                                       <-------GAMYB <---------ATHB12                                                      --------->MYB52(2)                                                      <---------MYB46(3)                                                      --------->MYB111(2)                                                      --------->MYB46(2)                                                      --------->MYB55(2)                      <------                                                      --------->MYB111(1)                     <------NtERF2             <---------MYB59                      <---------MYB46(3)------>MYB46(1)           -------         --------->WRKY12                      <------ZmHOX2a(1)    ------>MYB83              <------         ----------->HVH21               <----------DOF2     <---------ANAC58                 -------         --------->WRKY38(1)            --------->TOE2(3)   --------------->AtSPL3         <---------At4g35610   --------->DAG2                    <-----------GT1 <--------P --------->SPL7             <------NtERF2  ---------->DOF2            ----------->GT1 <---------TOE2(3)<---------SPL7            <---------LBD16   aaaaaaaagcgatgacctaaaacattgaactaggtaaattaacctttgaggatgggtagttgtccgtaccaatcgcgatttctcacatttctcggcagct  2387700                                                                  <---------HSFC1(2)                                                                  --------->HSFC1(2)                                                                 <---------ALFIN1                                                             --------->ANAC58                                                             --------->ANAC58                                                            --------->SPL7                                                          <---------SPL7                      <------MYB46(1)                    <------MYB46(1)                 --------->ATHB12                        <------MYB83                             ---     ------>ZmHOX2a(1)<------MYB83                      <---------------AtSPL8                    <-- ---At4g35610    <---------ICU4                         --------->MYB59                        <----- -->ZAT2 <---------ALFIN1                               <---------------AtSPL3                 ------ ---ZAT2------>ZmHOX2a(1)                             >>>>>>>>>CBP60g                 <---------WRKY18(1) -->At4g35610   <---------YAB1       <----------DOF2  >>>>>>>>>SARD1      --------->MYB46(3)   <-----   ctcactcctcctcacttcatcatttggttcaaagactgacttttgtttttgatgaaatttggtacggacacttcgaacaactcaaacttgaccacaatat  2387800  Previous    Next  AGI:  At5g07540.1    Description:  GRP16 (Glycine rich protein 16); nutrient reservoir. similar to GRP19 (Glycine rich protein 19) [Arabidopsis thaliana] (TAIR:AT5G07550.1); similar to pollen coat oleosin-glycine rich protein [Arabidopsis arenosa] (GB:AAR15495.1); similar to pollen coat oleosin-glycine rich protein [Arabidopsis arenosa] (GB:AAR15444.1); similar to pollen specific glycine-rich protein GRP16 [Arabidopsis lyrata subsp. lyrata] (GB:AAQ56103.1); contains InterPro domain Eggshell protein (InterPro:IPR002952); contains InterPro domain Oleosin; (InterPro:IPR000136) Range:  from: 2386067    to: 2387250    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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