Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  ------>ZmHOX2a(2)                                               <------ZmHOX2a(2)        ---------->DOF2                       --------->ARR14(2) --------->LBD16                              <-----------ARR10            <-------GAMYB -------->LBD16                               <---------ARR14(2)          --------->MYB111(1) ------------->AGL15                        --------->LBD16               --------->MYB111(2) --------LBD16       <---------ANAC58      --------->HSFB2a(2)     --------->ICU4 ---------------AG------->GAMYB<---------MYB52(1)          <-----------RAV1(1)   <----------DOF2 ---------------AGL1 <---------ANAC46     <---------LBD16<---------ANAC46 --------->MYB55(2)      --- -------------->AGL1 <---------ANAC58   <---------SPL7<-----------RAV1(1) <---------MYB46(3)   <----- ----ARR14(2)    --------->MYB46(3)   ------->TEIL  <---------At4g35610  <--------P            ------ --->ARR14(2)  --------->MYB52(1)    <---------DOF5.7(2)<---------MYB52(1)--------->MYB52(2)<--------   tcccggtttggaaagagcaacggtcgtgttcccgtttgtgaacgtccggatcgcatctgttgtgttgcaattttggtagttgtctttagccacttcgtat  2365200                                                                                         <---------AHL20(2)                                                                                        --------->AHL20(1)                                                  <---------AHL20(1)                    --------->AHL20(2)                                                  --------->AHL20(2)                    <---------AHL20(2)                                                  <---------AHL20(2)                    <---------AHL20(1)                                                  --------->AHL20(1)                   <---------AHL20(2) ------>ANAC46                                 <---------ICU4                          --------->AHL20(2) ----ARR14(2)                                 --------->ICU4                      --------->At5g28300 --->ARR14(2)                               --------->ANAC46             <---------TOE2(3) -ANAC46                            --------->TOE2(3)          <---------ICU4    ----------->GT1   acactatgcgtcgatgagtattggaacacttgcaaaaacattatacacataattaattagactaattagttcattaagggaaactgtaaattaatttgag  2365300                                                                                     ----------->RAV1(2)                                                                                     <---------ANAC46                                                                                     <---------ANAC58                                                                                     <---------ANAC58                <---------AHL20(2)              <---------ARR11(3)               <---------ANAC58                --------->AHL20(2)              --------->ARR11(3)               <---------ANAC58          ----------->GT1                       <---------GLK1(2)            --------->GLK1(2)    --------->ICU4                             --------->YAB1               <---------GLK1(2) <---------AHL20(2)                       <---------YAB1               <------ZmHOX2a(1) --------->AHL20(2)                ----------->RAV1(1)              <-----------RAV1(2)   tttttaattatgtagtatatatatagttggatgaagccaacatgatcaaagatacttacttagaacatcaccaggagagaatcgcttgcctgaagtccaa  2365400                             <---------ZAT2                             --------->At4g35610                             <---------At4g35610       <---------ANAC58                             --------->ZAT2            <---------ANAC55(2)                            --------->ARR14(2)         --------->ANAC55(2)                            <---------ARR14(2)         <---------ANAC58                          --------->LBD16              ----------->GT1                       ------>MYB46(1)              <---------MYB52(1)           <---------At4g35610                     <-------GAMYB            --------->REM1(1)       ------>ZmHOX2a(2) ------->GAMYB            <---------ANAC58    <---------YAB1      <------ZmHOX2a(2)------>MYB83               <---------ANAC58 <---------YAB1       <---------YAB1     <---------ARR14(2)--------->MYB52(1)---------->DOF2    --------->REM1(1)   ------->GAMYB     --------->ARR14(2)-------->P     ------>ZmHOX2a(1)<---------ANAC46<-----------GT1--------->YAB1   gactcgagatcggagcttatgtcccaaccggagctgtctcctacaaagtatgtcgttgcgttacatcttcttattactacaaccccaaatatgatgcaga  2365500                                                                              <---------ANAC46                                                                       <---------AHL20(2)                                                                       --------->AHL20(2)                                                                   <---------ANAC58                      --------->O2      --------->ANAC58           <---------ANAC46              --------->ARR14(2)        --------->ANAC58           <---------ANAC58              ------->TEIL              --------->ANAC46     --------->AHL20(2)              <---------ARR14(2)       --------->ZAT18       <---------AHL20(2)             <---------CCA1(2)       --------->ZAT14         --------->AHL20(1)       --------->ARR11(3)            <---------ZAT14         <---------AHL20(1)   ---------->DOF2    <---------O2   <---------ZAT18        --------->AHL20(2)<---------ANAC58   XXXXXXXXXXXXXXXXXXXXXXX>MIR163    --------->ZAT18        <---------ATHB12  <---------ANAC58   gattgaaaagaaattgtatcttcgacgtcttcttcatagtgcacgctgtttgtattttctcaataaattgcgtttaattttcttgtattgctatagttgt  2365600                                                                                    ------>MYB83  <--                                            ----------->TBP             <---------MYB46(3)     ------                                          <-----------TBP            <------------CBF          ------                               --------->AHL20(1)              <--------P  <---------MYB46(3) -------                               <---------AHL20(1)     <---------TOE2(2)<---------AtMYB61      <------                        <---------TOE2(3) --------->AHL20(2)<---------TOE1(3)     <---------MYB59 ---                     --------->ICU4     <-----------TBP     <---------TOE2(3)     <---------MYB46(2)      *TSS    <---------AtLEC2--------->AHL20(2)--------->ANAC46    --------->ATHB12------>MYB46(1) -   ctatatgcatatgtgtgaatggaattatggaaatatatatgtttttatataaggcataggttaaggttgctcattggtggataacctaacttcacaacca  2365700           <---------ARR11(3) ----------->RAV1(1) -------ALFIN1 --->AtMYB61 ->GAMYB   --------->ARR11(3)                                    <-----------GT1                <---- -->MYB46(3)            <---------ANAC46                  <---------ANAC46                      ----- ---MYB55(2) ------>ZmHOX2a(2)   <----------DOF2          <---------ANAC58               <-------GAMYB ------>AtMYB61   --------------->AtSPL8                  <---------ANAC58      <-------TEIL--------- -------->ANAC46 <----------DOF2<---------DAG2          <-----------GT1     <---------YAB1<---------MYB52(1)   ccacaacatatatgatctgctttgttccctatagccttttttttgttcttaacaaatttttcgtgtttcacaattcatatgattcatatgctgttagtta  2365800         <---------------AGL15        ----------------->AG        ------->GAMYB        --------->TOE2(3)        =============================================================================================        ----------------->AGL2        ----------------->AGL3        --------->TOE1(3)     <---------ALFIN1    --------->MYB46(3)                                                                <--------------    <---------ALFIN1                                                           ----------->RAV1(1) <---------ZAT18                             --------->At5g28300         <---------WOX13(1) --------->ZAT18                  <---------ARR14(2)     <---------AHL20(2)   --------->ANAC46     -- -----DOF5.7(2)                   --------->ARR11(3)     --------->AHL20(2)--------->ZAT18         <- ----->DOF2           --------->ARR11(3)    ----------->GT1            --------->ATHB12          ---- >MYB52(2)      ----------->GT1   <---------ARR11(3)  <---------ICU4  <---------YAB1  ---------------   aagtccacaaccctaaaatggttaaatcttgatggagatattgaagcagtaattcatatttattttttgttcttgattgcacaacatacaaatataggga  2365900                                                                                   <---------HSFB2a(2)                                                                                   --------->HSFB2a(2)                                                                                   --------->HSFC1(1)                                                                              <----------DOF2                                                                           ---------->ID1  <---------AHL20(2)          --------->AHL20(2)                        <---------DAG2  --------->AHL20(2)  <---------ANAC58                                  <----------DOF2 =MADS_MADS           <---------ANAC46                                ------->TEIL <---------HSFC1(1) -AGL15               <---------ANAC58            --------->YAB1     <-----------GT1 ------->ARR11(3)   <---------YAB1      ------>ZmHOX2a(2)          <---------ANAC55(2) --------ARR11(3)<---------ATHB51     <---------ARR11(3)           --------->ANAC55(2) ------->ARR10   <---------AHL20(2)   --------->ARR11(3)          --------------->AtSPL3 >AGL15    ----------->GT1    <---------AHL20(2)  ----------->GT1 --------------->AtSPL8   agattttaatggccagtaaataatgcttgtatttatatatgatcttgtggaatggtgatattagttgttatgtacttttccttttctcgaaaatacttgc  2366000                                                                                    --------->AHL20(2)                                                                                 ------>MYB46(1)                                                                               <---------MYB111(1)                                                                               <---------MYB46(2)                                                                               <---------MYB59                                                                             -------->P                                                                             ------>MYB46(1)                                                                             ------>MYB83                                                                           <---------MYB46(2)                                                                           <---------MYB59                                                                           <---------MYB111(1) ------                                                                        ------>MYB83<---------AHL20(2)                                 --------->TOE1(3)                      ------>MYB46(1)       -------                                 --------->YAB1                       <---------MYB46(2)  <---------ANAC58   <---------ANAC58              --------->TOE2(3)                 <-----------GT1  --------->YAB1 <-   <---------ANAC58       <-------GAMYB              ------>ZmHOX2a(1)<---------MYB59     <---------ANAC58   <---------ANAC46      --------->ALFIN1 ------>ZmHOX2a(1)      <----------DOF2 ------>MYB83 <------   agagggcttggaattggcattgaaggggtgttgaaccataactcctcgactaatcctgagtgtttctctttaccaaacctacctaataatatgcgtccag  2366100  Previous    Next  AGI:  At5g07475.1    Description:  plastocyanin-like domain-containing protein. similar to plastocyanin-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G27200.1); similar to Cu2+ plastocyanin-like [Arabidopsis arenosa] (GB:AAR15487.1); contains InterPro domain Cupredoxin (InterPro:IPR008972); contains InterPro domain Plastocyanin-like; (InterPro:IPR003245) Range:  from: 2364746    to: 2365606    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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