Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    ------->PIF5                  <-------PIF5                 --------->ANAC58                 --------->ANAC46                 <---------O2                 --------->O2            <---------ARR14(2)            --------->ARR14(2)           --------->GLK1(1)           <---------GLK1(1)         <---------ANAC58   =============================HOX2a_HOX2a   <---------YAB1--------->TGA1a   ------>ZmHOX2a(1)  --------------->AGL15                ----------->RAV1(1)  <---------------AGL15            --------->ANAC58  --------->TOE2(3)           ----------->HVH21 <-----------------AG        <-----------HVH21 <-----------------AGL1     ------>ZmHOX2a(1) ----------------->AG    ==================HOX2a_HOX2a ----------------->AGL1 <---------ARR14(2) -------ALFIN1   <---------TGA1a   --------->ANAC58                                                 - ---At4g35610    --------->bZIP60(2)<------ZmHOX2a(1)      ----------->GT1      <---------ARR11(3)  - -->ZAT2 <---------ANAC58<------ZmHOX2a(2)          --------->ANAC58  --------->ANAC58         ------ -->At4g35610    --------->ANAC58  --------->ANAC46 --------->ANAC58  --------->ANAC58        ------- ---ZAT2--------->MYB59 --------->ARR14(2)        --------->MYB52(1)  --------->ANAC46   <----------DOF2   ccatcctaattgggtatccacgtcccgatcctgtcacaggacaccagtaagaaaacggaaaccgaaaatttcaagaaaccaatatcgttttcttttcctc  2355500        <---------YAB1   ----------->GT1  <---------TOE2(3)  <---------TOE1(3) ---------->DOF2                --------->RVE1(1)                                                <--- -------->AHL20(2)        --------->LBD16                                     <-----------GT1 ------- -------->YAB1           --------->LBD16                            --------->YAB1     <---------ALFIN1 >ZmHOX2a(1)            <---------LBD16                    ----------->GT1 <-----------GT1 --------->At5g28300 -->TOE2(3)       --------->AHL20(2)                       <---------ZAT6 --------->AHL20(2)<--------   aattaaagttataaaaaaaaaaaaatccctgaaaatatcacatggttttttaaaacaattagtgttaaaatcaaaatttactaccttctccaccgttatt  2355600                                                                       <---------AHL20(2)                                                                       --------->AHL20(2)                                                                       <---------ICU4                   --------->KAN4(2)                                  --------->ICU4                  <---------KAN4(1)                                <---------MYB52(1)                  <----------TaMYB80                              --------->LBD16                  --------->KAN4(1)                              --------->ANAC55(2)      <----------                 <---------KAN4(2)                               --------->ANAC46  --------->AHL20(2)      <---------At5g28300                                        <---------ANAC55(2)   --------->YAB1     <-----------GT1                                      <---------AHL20(2)      <---------YAB1  ------->TEIL   ---------->TaMYB80                      --------->AHL20(2)     --------->YAB1 --------GT1  <------MYB83                       <-----------GT1<---------LBD16 <---------ICU4 -->MYB52(2)  <------MYB46(1)  <----------DOF2  --------->ICU4<-----------GT1   <--------HAHB4 -MYB52(1)  <--------P--------->TOE2(3)--------->ARR11(3)<---------AHL20(2)    --------->ICU4<-------   tacgaatttaccatgttggtatattcttaaaaacttttgtagttcttgtaattactaaattttttttccgtaattttttcgattattatttataactttc  2355700                   ----------->GT1              <---------AHL20(2)              --------->AHL20(2)           <---------ARR11(3)                        --------->CCA1(2)           --------->ICU4    --------->ANAC58                 --------->TOE2(3) <---------YAB1          <---------ICU4    --------->ANAC58                 --------->YAB1 <---------ARR11(3)         --------->YAB1    --------->ANAC46  <---------AHL20(2)            --------->ARR11(3)   ----------->GT1 -GT1      --------->AHL20(1)       ----------->GT1 --------->ARR11(1)  ----------->GT1 ---DOF2   <---------AHL20(1)---------->DOF2    ---------->DOF2    ---------->DOF2--------->YAB1   --   caactcaagccaatatttttttagtaaattttaaaggaatgttaatcttctaaagatatgtttgacttaaaaaggagttaaaaatgatgagatagccaaa  2355800                                                                                  --------->TOE2(3)                                                                                 <---------ANAC55(2)                                                                                 --------->ANAC55(2)                                                                                 --------->ANAC46                                                                                 --------->ANAC58                                                                                 --------->ANAC58                                                                                <-------TEIL                                                                               --------->CCA1(2)                                                                              <---------ARR14(2)                                                                              --------->ARR14(2)                                                                             ========================                                                                             <------ZmHOX2a(1)                                                                             ========================                                                                           <---------TOE1(2)                                                                           <---------TOE2(2)                                                                         <---------SPL7                                                                         --------->TOE1(2)                                                                        --------->TGA1a                                                                        <---------TGA1a                                                                        <---------bZIP60(2)                                                                        <---------ANAC46                                                                        <---------O2                                   ===============================================bZIP_DOF                                   ---------->DOF2                      <---------ANAC58                        --------->YAB1                                  <---------ANAC58          ---                       <---------AHL20(2)              <---------ICU4  <---------TOE2(3)         <---                    --------->AHL20(2)        <---------ZAT14         <---------TGA2(2)    --------->ARR14(2)                   <---------AHL20(2)      <------------CBF          ----------->TGA1      <---------ARR14(2)           <---------GLK1(1)    --------->At5g28300    <--------HAHB4----------->HVH21    <---------GLK1(1)           --------->GLK1(1)   ----------->GT1--------->ZAT14      ----------->RAV1(2)    --------->RVE1(1) -------->DOF2     --------->AHL20(2)     --------->ATHB12        <-----------HVH21       --------->CCA1(1)   aaaaagattagagaaatccaaataaataataaggggtaaaagagtcattgcagtcgataattagtctccgtctgacgtaggatacgtcaaaaatatccga  2355900                                                                                                  <--                                                                                                  ---                                                                                              <------                                                                                              <------         <-----------GT1                                                                     <------- ====HOX2a_HOX2a                   <---------ARR14(2)                                  -------------- ===HOX2a_HOX2a                    --------->ARR14(2)                                 <---------ARR11(3) --->ZmHOX2a(2)        <----------DOF2*TSS                                            --------->ARR11(3) ---ZmHOX2a(2)<----------DOF2   ----------->TBP    <<<<<<<<<TBF1        <---------ATHB12  <----------   tctcattcaaattacgctttctcttctttcccctacaaatactcaattctttcttcttcaattcatcacaacaaatcaaaaactccaagttcttaccttt  2356000                                                                ------>ZmHOX2a(2)                                                              --------->ARR14(2)                                                              <---------ARR14(2)                                                       --------->ARR11(3) ---------GT1                                  <----------DOF2<---------ARR11(3) ------->ID1                                   <---------DAG2 --------->ARR11(3) ----DOF2                           <-------TEIL       <---------ARR11(3)                          <- ---DAG2                      <---------ANAC55(2)     <---------GLK1(1)                     <-------GAMYB --DAG2                       --------->ANAC55(2)     --------->GLK1(1)    <----------DOF2 --------->MYB52(2) ->AtSPL8    --------->At5g28300   --------->CCA1(2)  <---------CCA1(2)<------ZmHOX2a(2)   <---------MYB46(3) -GT1       ----------->GT1<------ZmHOX2a(2)<-----------GT1  <---------CCA1(2)    <---------AHL20(2)   ttcccatttacaatcggtaaatttctccgatcacgagatacaaatttcactttctgatatcttggatcttccgatcactttgaattttttggtttgttga  2356100                                                                                     <---------MYB52(1)                                                                                    <-----------TGA1                                                                              <---------HSFC1(2)                                                                              <---------HSFB2a(1)                                                                              --------->HSFC1(2)                                                                              --------->HSFB2a(1) ---                                                                       --------->MYB52(1)         <--                               --------->AHL20(2)                     ------->GAMYB <-----------HVH21                               <---------AHL20(2)                    --------->MYB46(3)       -------                     --------->DAG2                           --------->At4g35610   <---------RAP2.6(3)                    ---------->DOF2                           <---------At4g35610  --------->ANAC55(2)                 --------->HSFB2a(2)                      <----------DOF2   <---------GLK1(2) <------           --------------->AtSPL8 <---------YAB1      ------->TEIL   <---------MYB52(2)    ------->TEIL --------AHL20(2)<---------HSFB2a(2)               <---------YAB1  ----------->RAV1(1)  --------->AtLEC2   ttttttttttttttttgttccataaagttcgaattttttatagagaagaaaccatgaatgctttagctgcaacaaacagaaacttccgtcatgcatctcg  2356200           --------->ARR14(2)           <---------ARR14(2)   <---------TOE1(2)  --------->LBD16                                                            <----------DOF2  =========================HOX2a_HOX2a   --------------->AGL15              <---------------AGL15  ------>ZmHOX2a(1)                      <---------------AGL15              --------------->AGL15 --------->TOE1(2)                       ===================================================MADS_MADS --------->TOE2(2)                 <---------YAB1  --------->GLK1(1)       ----------------->AG <---------LBD16    <------ZmHOX2a(2)   ----------------->AGL1            ---------->ID1     <------- ------>ARR14(2)   <---------ARR14(2)   ----------------->AGL2   <---------DAG2   <---------TOE2(3) -------ARR14(2)   --------->ARR11(3)   ====================================================MADS_MADS -->HSFB2a(2)      --------->ARR14(2)   ----------------->AGL3   <----------DOF2  <---------TOE1(3) ---HSFB2a(2)      <---------ARR11(3)  ------>ZmHOX2a(2)<---------TOE2(3)<-----------GT1<-----------GT1   aatcctgggtttggattcgaagatcgagagaagtcttatgatcccatttagagaaatcaaggtttgacttttttttttccttttgaggttttactctttt  2356300                                                                  --------->ZAT14                                                                  <---------SPL7                                                                  <---------ZAT14                                                                  --------->ZAT18                                                                <---------------AtSPL3              --------->HSFC1(2)                                --------------->AtSPL8              --------->HSFB2a(1)                        <---------TOE1(3)              <---------HSFC1(2)                         <---------TOE2(3)              <---------HSFB2a(1)                       <-----------RAV1(2)  ---------->DOF2 ----------------->AGL1                              <---------GLK1(1)      ------>ZmHOX2a(1) <---------ANAC46                                 <---------YAB1<---------------AtSPL8 <---------ANAC58   ---------->ID1             <----------DOF2 <---------ANAC58 <---------ANAC58<-------TEIL           <---------AHL20(2)     <---------ANAC58 ---DOF2<---------LBD16   <---------ATHB12  <-----------GT1    <---------ANAC46   gtttcgtttttggggaaaattcgtctcaatctttgtttggatttttttacttttgatttcaggttgagtgtacgattcctaaagacgatggcactctggt  2356400  Previous    Next  AGI:  At5g07440.1    Description:  GDH2 (GLUTAMATE DEHYDROGENASE 2); oxidoreductase. Identical to Glutamate dehydrogenase 2 (GDH2) [Arabidopsis Thaliana] (GB:Q38946); similar to glutamate dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT3G03910.1); similar to GDH1 (GLUTAMATE DEHYDROGENASE 1), oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G18170.1); similar to GDH2 [Actinidia chinensis] (GB:ABR45724.1); similar to glutamate dehydrogenase [Brassica napus] (GB:BAB62170.1); similar to Glutamate dehydrogenase A (GDH A) (GB:O04937); contains InterPro domain Glu/Leu/Phe/Val dehydrogenase, dimerisation region; (InterPro:IPR006097); contains InterPro domain Glu/Leu/Phe/Val dehy Range:  from: 2355938    to: 2358195    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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