Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                                                <----                                                                                               <-----       <---------YAB1                                                                          ------     --------->YAB1                                                                            <-----    <---------YAB1                                                                             ------  --------->YAB1   --------->ATHB12                                                            ======  <--------HAHB4   <---------ICU4                                                              <----- <---------YAB1   <---------YAB1    <---------HSFB2a(2)            --------->CCA1(2)           <----- ------------->AGL15 <---------WOX13(1)       --------->AHL20(2)  --------->ARR11(3)       <---------At5g28300 ---DOF2--------->YAB1       --------->MYB52(1)                   <---------ARR11(3)      --------->MYB52(1)   tctattattataaaaacttgataattgacattaccggtctagtagaaataaaacacaaaatttgaagagatatatataagttcgatcgaaaatcacggcc  2352000                               --------------->AGL15                               <---------------AGL15                              =======================================================================                              ----------------->AGL2                              ----------------->AGL3                              <-----------------AGL3            --------->ATHB12  <-----------------AGL2          <-----------TGA1  <---------ARR14(2)          <-----------HVH21 --------->ARR14(2)  --------->ALFIN1         --------->GLK1(1) ---------->AGL15      --------->ANAC58 -----------AGL15      --------->ANAC58             --------->AHL20(2)           <-----------HVH21 ------------AGL2     --------->DAG2                <---------AHL20(2)          ------>ZmHOX2a(1) ----------->AGL1    ---------->DOF2                <---------YAB1        <---------ALFIN1 ------------AG   --------->ANAC55(2)              <---------AHL20(2)    --------->MYB46(3) ----------->AGL2 <---------ANAC55(2)              --------->AHL20(2)  <-----------GT1 ===============================================MADS_MADS            <---------MYB52(2) ------------AGL1 <---------ANAC46      <------ZmHOX2a(1) <---------TOE2(3)   ----------->RAV1(2) ------------AGL3<---------TOE2(3)    <---------TOE2(3)   <---------YAB1-------->P                <--   aaatgtgggaagcgtcattgacgtaaagcaaatccaaatttaggaagtgtcattttaattaacattgaactactaaccactcctgtcatgtctagcaaat  2352100                                   ----------->GT1                                  <---------TOE2(3)                             <----------DOF2                            <---------------AGL15                           <-----------------AGL1           --------->AHL20(2)------>ZmHOX2a(1)         --------->TOE2(3) ----------------->AGL1                 <-----------GT1        --------->YAB1 --------->MYB59>>>>>>>>>GT-1 --------->ARR11(3) ===========================================MADS_MADS--------->CCA1(2) ---------GT1    <---------TOE2(3)<---------TOE1(3) <---------ARR11(3)          <----------DOF2   ttacattcaaacataaattgtggtttaggtccttttcaggtaaatctatagatagatatatagcaaattaacaacatagttccttttggatgagtcaata  2352200                                                                                                    -                                                                                                    <                                <---------DAG2                                 <---------ICU4    ----                                <----------DOF2        ------->TEIL<-----------GT1<-----------GT1<---                             <-----------GT1      --------->At4g35610       --------->YAB1      -----                     --------->At5g28300    <-------GAMYB--------->TOE1(2)--------->AtLEC2      <----                    ----------->GT1  <-------GAMYB<---------At4g35610<-----------GT1          -------             <-----------GT1<-----------GT1<---------MYB46(3)    <---------AHL20(2)        ----------   ttcaacatgttgattttgccaactgtaaattttccttttcgttgatggttacagatgaatgtgcgaatttatctccattcaaaattactgaatttgtaat  2352300                                                                                   <------ZmHOX2a(2)            --------->GLK1(1)                                                     --------->ARR11(3) -------->YAB1                              --------->DEAR3(1)                    <---------ARR11(3)- -----------GT1                          ----------->RAV1(1)                     --------->GLK1(1)--- ----->YAB1 <---------RVE1(1)           --------->MYB46(3)         --------->CCA1(2)     --------->ANAC46 ------ICU4<---------ARR14(2)         <-----------GT1             --------->ARR11(3)     --------->ANAC58 ---->ICU4 --------->ARR14(2)         --------->ANAC46            <---------ARR11(3)     --------->ANAC58 -----YAB1 --------->ARR11(3)--------->ANAC58              --------->ICU4    <---------WRKY12-------- -->YAB1   <---------GLK1(2) --------->ANAC58         --------->YAB1       <-----------HVH21 -------- ->GT1     <---------ARR11(3)--------->ANAC46         ----------->GT1 <-----------HVH21--------->MYB46(3)   aataacaaaatcagatattcaaaaatgcttcaagaaatataaaccacagacgagaatagtaaaaatgagatatgtccggtcagagatcaacaagcaagac  2352400                                                                                             <-------                                                                                            ---------      <-----------GT1                                   ----------->GT1                   --------->YAB1  ----------->TBP                                   <---------TOE2(3)                    <---------YAB1 -------->YAB1                                      <---------YAB1                    <----------DOF2 -------->GT1                                 --------->AHL20(2)   --------->ZAT6  ---------->ID1   < ->ANAC58                                 ---------->DOF2        <-----------GT1<----------DOF2  <--- ->ANAC58   <-----------HVH21           *TSS----------->GT1   --------->YAB1 <-----------GT1<--------   aagtataaaaaccccttcaaggcttcttcatttcttccatttttaaaagtaaataagatagtaatattaacacttagtttttcttttccttttcattatt  2352500                                                                               <---------ANAC58                                                                               <---------ANAC58                                                                               <---------ANAC46                                   --------->AHL20(2)                     <---------ANAC58  <---------AHL20(2)           ---------->DOF2                            <---------ANAC58          < --ICU4                       --------->AHL20(2)                      <-------GAMYB               <-- >ICU4                   --------->AHL20(2)      ----------->GT1     <---------MYB46(3)           <-- ----------DOF2      ---------->DOF2      ---------->DOF2          --------->LBD16          <-------- ------AHL20(2)     --------->AHL20(2) --------->AHL20(2)         <---------ANAC58          <-------- -YAB1             ------------------------>ANAC81                <---------ANAC58 ---------->ID1<---   ttcttttattttgtaacagaaataaaagaaaataaaagaaaataaaaagatgggttacatttcaatgtccgtggttgcattccttgttgtttttgcttcg  2352600             <------NtERF2           --------->DEAR3(1)       >>>>>>>ZML2              --------->LBD16           ----------->GT1  --------->ABI4(2)     ------>ZmHOX2a(2)                <---------ATHB12  <---------MYB46(3)   --------->CCA1(2)             --------->LBD16  --------->MYB55(2)   --------->ARR14(1)           --------->LBD16               <---------ARR14(2)- <---------AtMYB61     <------ZmHOX2a(2)            --------->ANAC55(2)           --------->ARR14(2)- --------->ALFIN1     --------->ARR14(2)            --------->ANAC58        <-----------GT1         - ---------MYB52(1)    --------->AGP1                --------->ANAC58     --------->DOF5.7(2)       -- -------ATERF1(2)     <---------ARR14(2)        --------->ARR14(2)      --------->TOE2(3)        <--- -------DEAR3(1)<---------ARR14(2)              <---------ARR14(2)      --------->TOE1(3)        ---- -ANAC58  <---------MYB55(2)   <---------HSFB2a(2)  --------->ANAC46 --------->MYB52(1)     --------- -ANAC58  --------->MYB46(3)   --------->HSFB2a(2)  <---------ANAC55(2)----------->GT1  --------->LBD16 ------LBD16------>NtERF2      <---------HSFC1(1)  <---------LBD16 <---------MYB52(2) <---------LBD16   ccggtggttctagccaccgatacagatccgattccagaaaacagagcccaaatcccgcaatggtttaaaacaaacgttaaaccatattcccagagaaagg  2352700                       --------->At4g35610                       ----------->RAV1(2)                       =========================RAV                    --------->At4g35610                    <---------At4g35610                    --------->HSFB2a(1)           ------>NtERF2          --------->ANAC58          --------->ANAC46          --------->DEAR3(1)          --------->ANAC58          <---------ALFIN1                                                             <-------TEIL         --------->ATERF1(1)                   <---------At5g28300                  <------MYB83        <---------ATERF1(1)  <---------At4g35610     --------->MYB52(2)             <------MYB46(1) -------->ANAC58    --------->ZAT2            <-----------GT1                  <---------MYB46(3) -------->ANAC58    <---------ZAT2  ----------->RAV1(1)                        <------MYB83        <- -------->ANAC46    <---------HSFC1(2)       <---------YAB1                    <------MYB46(1)     <- ------->ZAT18      --------->HSFC1(2)     <---------ICU4                     --------->MYB59     --- ------ZAT18   <---------HSFB2a(2) <----------ID1 --------->At5g28300         <---------AtMYB61   --- ----->ZAT18 --------->DEAR3(1) --------->At4g35610<---------MYB52(1)<----------DOF2<---------DEAR3(2) ->DOF2--------->ANAC46<---------At4g35610 --------->YAB1      --------->GLK1(2)   --------->MYB59---   gcacgctagaccccgccctcgaagctgctgaagcagcgcgacaaattatcaccgtaagttactaaaatctgatttttggtttggttcggttcatatcgat  2352800  <---------MYB59                                                                        <-----------RAV1(2) ----------------->AGL1                                                            <---------YAB1 -------->ZAP1                                                                  <---------ARR11(3) --------WRKY18(1)             <---------ANAC46                                 --------->ARR11(3) ----------GT1                 <---------ANAC58                                 --------->GLK1(2) ------>WRKY38(1)              <---------ANAC58                                 <-----------ARR10 --- ------>WRKY12        <---------AHL20(2)                                    --------->YAB1 <---------At4g35610 -------->HVH21   ----------->GT1                      ------->TEIL        ----------->GT1 --------->At4g35610   ttgaccgaattaagtaggcgttgttaaatttttgcttatatgaatagtttacaaatgtatgttaactcgagtgaaaaatgaaaatctcattgcaggtgaa  2352900  Previous    Next  AGI:  At5g07430.1    Description:  pectinesterase family protein. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G07420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62285.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050) Range:  from: 2352440    to: 2354203    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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