Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------->ANAC46                                     <---------HSFC1(2)                                     --------->HSFC1(2)                                 --------->ANAC46                              --------->TOE2(2)                              --------->ZAT18                            <---------ARR14(2)--------->ANAC58             ------->TEIL  <---------WOX13(1)        --------->ARR14(2)--------->ANAC58   <----------DOF2        <---------HSFB2a(1) -------->ATHB12            ------->TEIL--------->At4g35610      <---------DAG2       ---------->DOF2 ---WOX13(1)       <----------DOF2   --------->HSFB2a(1)   --------------->AtSPL8    <------ZmHOX2a(1) >ATHB12      <---------ALFIN1--------->TOE1(2)            <---------------AtSPL3  <---------TOE2(3)   actaattggtaatgttccactctttatgtgaatctacgaagcatctaaacgcaaaaacaaacttgtacttttccatgagcctactaaggaaagctcgagg  2349100                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    <                                   <---------------AGL15                                           <-                            <---------AHL20(2)                                                     --                          <---------ANAC55(2)                                                      <-                          --------->ANAC55(2)                --------->AHL20(1)                 -----                        --------->YAB1         <---------AHL20(1)                               <----                       <---------ATHB12        --------->AHL20(1)       <---------YAB1         <-----                       --------->ICU4          <---------ARR11(3)    <---------YAB1         <--------                       <---------ATHB51        --------->ARR11(3) <---------YAB1         ------>ZmHOX2a(2)              <---------ARR14(2)   <----------DOF2           <---------AHL20(1)         <---------GLK1(1)              --------->ARR14(2)  --------------->AGL15   --------->AHL20(2)            --------->GLK1(1)   ttttctatacaatgcagtttcggcaattatgtaattccttttatatgaaaatatttggattaatatatatgattcttatttgagtctctgatctctgatt  2349200           --------->YAB1         <---------WOX13(1)     <---------TOE2(3)  <---------YAB1 -------->ATHB51 ---------ICU4 ------->HAHB4 -------->YAB1 ---------AHL20(2)        <---------ANAC46 ------->ATHB1          --------->YAB1 --------HAHB4         <---------ATHB51 --------YAB1          <---------ATHB12                                            --------->ANAC58 ------->ICU4      <---------MYB52(1)                                              --------->ANAC58 --------ATHB51   <-----------HVH21                                                --------->ANAC46 ---->AHL20(2)   ------->GAMYB                   --------->ANAC58       --------->YAB1     <-------TEIL -----AHL20(2)  <------------AtMYB77             --------->ANAC58   <-------TEIL <---------ALFIN1 ----WOX13(1)   --------->MYB46(3) <---------GLK1(2)       <---------GLK1(1)     --------->ANAC46 -YAB1<---------YAB1 --------->WOX13(1)      --------->YAB1--------->GLK1(1)   <-----------GT1   aattattaatgaatgataaccgtcaattatgtggatagaatatcgaataataagctacttgatttccaaattcatcacaattcacacaccaagtccataa  2349300                                                                                           --------->AtLEC2                                                                                        --------->WRKY18(1)                                                                                ------>ZmHOX2a(2)                                                                               <------ZmHOX2a(2)                                                                              --------->AGP1                                                                              >>>>>>>>>GATA-1                                                                              --------->ARR11(3)                                                                              <---------ARR11(3)                                                            --------->ANAC46  >>>>>>>>>GATA-4                                                            --------->ANAC58  >>>>>>>>>GATA-3                                                            --------->ANAC58  >>>>>>>>>GATA-2   -----                               --------->YAB1      <-----------GT1 --------->YAB1     --------->LBD16                        --------->TOE2(3)      --------->AHL20(2)  ----------->GT1<---------ARR14(2)                     --------->ANAC46     ----------->GT1 --------->ANAC46   --------->GLK1(1)-------                 --------->CCA1(2)      ---------->DOF2 <---------ALFIN1---------->DOF2<-----------HVH21   gaaatgactgcttcgagggatataaaccacaaatgagaatgcaaaagaaaaaaataccacacacgagaatagtaaaaagagatctatccggtcatgcatc  2349400                                                                                   <----------DOF2                                                                                <---------ARR11(3)                                                                                --------->ARR11(3)                                                                                --------->AHL20(1)         <---------ALFIN1                                                       <---------AHL20(1)         --------->AtMYB61                                                     --------->CCA1(1)        --------->MYB46(3)                                                  <---------ICU4     --------->LBD16                                                        <---------AHL20(2)     <---------ETT(1)                                                   <---------AHL20(2)  <------ZmHOX2a(2)                                                     --------->AHL20(2) --------->ARR14(2)                                                    --------->AHL20(2) <---------ARR14(2)                                        --------->AHL20(2)  --------->RVE1(1)  <-- ---->DEAR3(1)    --------->AHL20(2)                    *TSS<---------YAB1 --------->AHL20(2)<------- >TEIL------>NtERF2    --------->AHL20(2)       <---------CCA1(2) ----------------->AG     <---------   gacgatcccgaccactgcaagtatataaaatgtcccttcaaggcttcttcatctcttccatttttattcccaaattaataaatatctttttttcttttat  2349500                                        ---------->DOF2                                        --------->YAB1                                    --------->AHL20(2)                                   <---------AHL20(2)                                               <                                   --------->AHL20(2)                                               -                                <---------AHL20(2)                                                  -                                --------->AHL20(1)                                                 <-                                --------->AHL20(2)     --------->ARR11(3)                          --       --------->TOE2(3)        <---------AHL20(1)     <---------ARR11(3)               <-----------GT1 <----------DOF2            <---------AHL20(2)      <---------ANAC55(2)      <---------ANAC58     <-- -------AHL20(2)            --------->AHL20(2)      --------->ANAC55(2)      <---------ANAC55(1)<---- --AHL20(2)        --------->TOE2(3)<---------AHL20(2)<---------CCA1(2)      <---------ANAC58   <---- -DOF2 <----------DOF2     --------->AHL20(2)  ----------->GT1               <---------ANAC46<-------   tttcttttactttaaaaaaaaacttaaaaattaataaattaataaagatgggttacatatctctagccctagttgcattacttgtattttttgcctcgcc  2349600                                                                                                  ---                                                                                                  ---          ------>NtERF2                                                                           ---         --------->At1g77200  ------>NtERF2                                                      ----         --------->DEAR3(1)   --------->LBD16                                              <---------bZIP60(2)        --------->DEAR3(2)   <---------RAP2.6(2)                                           <---------TGA1a ---------MYB46(3)           <---------HSFB2a(2)                               <---------DAG2  <----- -------->ABI4(2)            <---------LBD16                                   <----------DOF2 <----- -------->MYB55(2)          --------->RAP2.6(3)                                ======================bZIP_DOF --------AtMYB61            <---------LBD16                           --------->TOE1(3)    <---------O2 ------->ALFIN1           --------->ARR14(2)               <-------TEIL--------->DOF5.7(2) --------->O2 -------MYB52(1)     --------->TOE2(3)                  <---------MYB46(3)<-----------GT1--------->CCA1(2) -----DEAR3(1)       ------->GAMYB            --------->ARR14(2)  <---------WRKY12  <---------LBD16 -----ATERF1(2)   <-----------GT1----------->HVH21<<<<<<<<<<<<<<<<<LFY--------->TOE2(3) ----------->HVH21 --DEAR3(1)<------NtERF2  <---------ARR14(2)  <---------ARR14(2)  <---------WRKY38(1) --------->LBD16   ggtggttctcgccgacgatataaccccaattccggcagacagagcccaaatcccacaatggttcatggccaacgttaaacccttttcccagagacggggc  2349700                                    <---------bZIP60(2)                                    <---------ANAC58                                    <---------ANAC46                                    <---------ANAC58                                    <---------O2                                    <---------TGA1a                                    --------->O2                                    --------->TGA1a                           <---------HSFB2a(1)       --------->AHL20(2)        --------->LBD16    <---------HSFC1(2)      --------->ANAC58  --------->YAB1      <---------TOE2(3) ------>ANAC58             --------->HSFC1(2)      --------->ANAC58 <---------YAB1    <---------YAB1 ------>ANAC46            --------->ANAC58  <---------ICU4        <-----------GT1     <---------WOX13(1) ------>ANAC58            --------->ANAC58 <---------YAB1 --------->YAB1       <---------TOE2(3) ----->ZAT18         --------->At4g35610   --------->ICU4 <-----------GT1     --------->YAB1 ----ZAT18        --------->At4g35610    --------->bZIP60(1)     <---------AHL20(2) --------->ATHB12 ----SPL7         <---------At4g35610    <---------bZIP60(1)    --------->AHL20(2)<---------WOX13(1)   acgctagaccccgaacttgaagctgcagaagcatcgcgacgtgtcatcatcgtaagtaaatcacaattttatcatacctataagattgattaatgtattg  2349800                                                                 <---------MYB52(1)                                                            <-----------GT1                                                 <---------AHL20(2)                                                 --------->AHL20(2)                                                --------->AHL20(2)                              <----                    ---------->DOF2     --------->ZAT18 <----------DOF2            --------->ZAT14                <----------ID1      <---------ICU4      --------->TOE2(3)          <---------ZAT14 --   aatccagttttcgtttttgagacaaagaaacctgataaaaattgcacaaattaaaatactttaaaccgttgtacttaaatttcagtatagttgtatttgc  2349900                                                 <---------GLK1(2)                                              <---------WOX13(1)                                            <------ZmHOX2a(1)                                 <---------AHL20(2)                                <---------AHL20(1)                         --------->YAB1    <---------YAB1                     <---------AHL20(2)                      --------->TOE2(3)   <---------TOE2(3)                  <----------DOF2                      --------->TOE1(3)   <---------TOE2(2)             --------->SPL7                      --------->YAB1      <---------TOE1(2)           <---------SPL7             --------->DAG2     --------->AHL20(1)                <----------DOF2       <-----------GT1 -----ANAC46---------->DOF2     <---------AHL20(2)          ----------------------->TaNAC69(2)  <---- --------->GT1----------->GT1   --------->AHL20(2)      <---------CCA1(2) ----------->GT1      <-----   tgggataaaaaaaaaaaagtaaaaccataatcaatttattctcttaggattgattcttgtatcgttttctttggtacggttttattgttttaactccgtt  2350000  Previous    Next  AGI:  At5g07420.1    Description:  pectinesterase family protein. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G07430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62286.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050) Range:  from: 2349456    to: 2351510    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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