Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         --------->TGA1a                                       --------->ANAC46                                       --------->O2                                       <---------ANAC55(2)                                       <---------O2                                       --------->ANAC55(2)                                       --------->ANAC58                                       --------->ANAC55(1)                                       <---------TGA1a                                       --------->ANAC58           <---------AHL20(2)          ===============================MYC_MYB              ----------      ------>MYB46(1)         --------->ARR14(2)                                           --------->ANAC58      ------>MYB83            <---------ARR14(2)              ------->GAMYB              --------->MYB52(1)    <---------MYB59==============================bZIP_DOF    --------->MYB46(3)     <---------ETT(2) ------RAV1(2)     <----------DOF2--------->At4g35610    <---------ATHB12 --------->TOE2(3)--------->ANAC58 ----HVH21 <---------YAB1 ---------->ID1    --------->REM1(1)<---------MYB52(2)   --------->At4g35610   ggttaaccaaatttttattagctttctcgtcgtattcgctcacgttacatcttagtctaatcaacaaacttcgaaatctaaatctgttgacaaacgaaaa  2340200                                                                    ------->PIF5                                                                    <-------PIF5                                                                   --------->ZAT2                                                                   ----------->RAV1(2)                                                                   <---------ZAT2                                                                  --------->MYB52(1)                                                                  ------>MYB83                                                                  -------->P                                                                  ------>MYB46(1)                                                                 <---------ALFIN1                                                                --------->MYB46(3)                                                                ------->GAMYB                       -                       <-----------GT1                        --------->ANAC46                      <                --------->AHL20(2)    --------->YAB1    <---------AHL20(2)                          -                <---------AHL20(2)   <---------ATHB12   -------->HAHB4                              -               --------->AHL20(2)  <-----------GT1      <---------ICU4                              <         --------->TOE2(3)         --------->YAB1      <---------ATHB12                             <       --------->ARR11(3)          --------->WOX13(1)  <---------ATHB51                             <       --------->GLK1(2)     --------->YAB1            <---------YAB1        <---------AHL20(2)    -- ->GT1 <---------ARR11(3) <----------DOF2              --------->ICU4        --------->AHL20(2)  <---   aacatcgaaaatctaaattaaaatataactttcatattaatcatacattttaaactaattattcaacccacctgcttaataaaacatagcattttctatt  2340300    <---------ALFIN1   <---------MYB55(2)   --------->MYB46(3)  -------->P                                                                                        <  ------>MYB46(1)                                                                                   <  ------>MYB83                                                                                   <--- --------->MYB55(1)                                                                            ------ -------->DEAR3(1)                                                                             ------ ---------MYB111(1)                                                                          -------- -------->AtMYB61<---------AHL20(2)                                                          <------- -------->MYB46(3)--------->AHL20(2)                                                         <------- ---------MYB111(2)        <---------ZAT6                         <---------ANAC58           <------- ---------MYB46(2)<---------AHL20(2)                              <---------ANAC58           -------- ---------MYB55(2)--------->AHL20(1)                           <----------DOF2              --------- ------->MYB46(3)--------->AHL20(2) <---------YAB1          <-----------GT1              --------->ZAT18 --------GT1   --------->YAB1       --------->ICU4   <---------AHL20(2)                  <---------ZAT18   caccaaccacttgcaaaaaataatttgtactgtaagagattattgtatagaatatttgattttgactttcttgtttttttttttttttttgtccaccaac  2340400                                        --------->ANAC55(2)                                        ----------->GT1 ---------ANAC58                        --------->ANAC58           <---------WOX13(1) ---------ANAC58                        <---------ANAC55(2)      <---------ICU4                    -- -------DOF2                            --------->ANAC55(1)      --------->ATHB12                  <- >MYB46(1)                   --------->YAB1                     --------->ICU4                     <- >MYB83 <-----------GT1      <---------ICU4                     <---------YAB1                     -- ->MYB46(3)                 <---------YAB1                    --------->YAB1              <---------AHL20(2) --MYB111(2)              --------->YAB1--------->ANAC58 <---------AHL20(2)          --------->AHL20(2) --ALFIN1                <---------YAB1 --------->ANAC46 --------->YAB1              <---------AHL20(1) --MYB111(1)     ----------->GT1    <-----------HVH21    --------->AHL20(2)          <---------ARR11(3) ->AtMYB61      --------->DAG2  <---------ICU4<-----------GT1<---------YAB1          --------->AHL20(1) >MYB46(3)     ---------->DOF2  <-----------GT1    --------->TOE2(3)       --------->YAB1 --------->AHL20(2)   tttcttgttttaacccaaaaagttactctgataataactatcacgtaattacatcttaataatatgataattggcattcgtaaactatatattaaaatga  2340500                                                   --------->MYB52(1)                              <-                                              --------->AHL20(1)                                   --           ---------->DOF2                    --------->AHL20(2)              ----------->GT1    <---          --------->AHL20(2)                  <---------AHL20(2)        --------->ALFIN1    --------- ------->ARR14(3)                     ----------->GT1                --------->DAG2  <---------AHL20(2) --------ARR11(3)              ----------->HVH21   <-----------GT1  ---------->DOF2 --------->YAB1--- --------ARR14(3)         <---------AHL20(2) --------->AHL20(2)   <<<<<<<<<MYB98   <---------YAB1<--- ------->ARR11(3)--------->AHL20(2)  --------->ALFIN1  --------->At4g35610  ---------->DOF2 ---------   agaccttgaaaataaaagattatatcaatttatctgaaggtggagaaattaattaacagctacagtatgttaaagtgggaaagttataatattcaagcta  2340600                <---------RAP2.6(3)                <---------SPL7                ------>NtERF2               <---------ANAC46               <---------ANAC58               <---------ANAC58            *TSS      <---------AHL20(2)                  <---------ARR14(2) --------->LBD16 -----ZmHOX2a(1)--------->ORA47(1)        --------->ARR14(2)<---------HSFB2a(2) ------->YAB1------>MYB46(1)          ------->MYC2          --------->HSFB2a(2) ------TOE1(3) --------->DEAR3(1)     ------->MYC3     --------->HSFB2a(1) >ANAC58  ----------->RAV1(2)         <-------MYC2     <---------HSFB2a(1)                      <---- -------->GT1------>MYB83      ---------->DOF2        ---------->TaMYB80                       <----- ------TOE2(3) --------->ATERF1(2)    <-------MYC3 ----------->GT1                  ---------->DOF2 >ANAC58<-----------GT1      <---------HSFB2a(2)  ----------->GT1 >>>>>>>>>MYB2 <---------LBD16<-----   aggataatttaaacctgccgtccaaacagttcccaaagcacatggatttgggagggaaaatcccagaaaaccaaaatcagtttggggaaagggttttgct  2340700                           <---------------AGL15               <----------DOF2                                                                    <--               <---------DAG2                                  <---------AHL20(2)               <----  <---------ARR14(2)       ------>ZmHOX2a(1)             --------->TOE2(3)                     <-----  --------->ARR11(3)       --------------->AGL15         --------->TOE1(3)                    <------  <---------GLK1(2)       <---------MYB59          --------->YAB1                         <---------AHL20(2) ------DOF2   <---------ANAC58                   <---------MYB52(1)                      <---------YAB1 ----ANAC58   <---------ANAC58         ----------->GT1<-----------GT1        ---------->DOF2<-------- ----ANAC58   <------------------------ANAC81   --------->TOE2(3)   <---------AHL20(2)--------->ICU4   ttcagattttgttcttgctttttctcttcctaatttttgaagggtttattcgttaataaccctaatttatgaaattggtgaaagggcaatttttattttt  2340800                     ------>NtERF2                     ----------->RAV1(1)          --------->CCA1(2)                       --------->ANAC46         <---------ARR11(3)                    <---------ARR14(2)   <---------At4g35610                        <---------CCA1(2)   --------->At4g35610<------NtERF2         --------->ANAC55(2)            <---------LBD16 -------YAB1        ----------->HVH21       <---------ANAC58   --------->ANAC58 -----AHL20(2)   --------->DAG2             <---------ANAC55(2)--------->ANAC46                    <- ----YAB1--------->ARR11(3)            <---------YAB1   <---------ICU4  <---------GLK1(1)     <------ ---AHL20(2)   ---------->DOF2  ---------->DOF2--------->ARR14(2)     --------->ATHB12  <---------ANAC58 -YAB1 ----------->ARR10  --------->ALFIN1  <---------ANAC58   --------->ANAC58         <---------ANAC58   atttttgctgagatatgaaaaggcgacagtgtgagaaagttgtgattcgtatccacaatattggcacaccattgatttctgggtcttctggtttgccttt  2340900                                     <------MYB46(1)                             --------->SPL7                             --------->ZAT14                           <---------SPL7                          --------->RAP2.6(2)                         --------------->AtSPL3                       ------------------>SPL14                     --------->RAP2.6(3)                     <------ZmHOX2a(2)                    <---------ARR14(2)                    --------->ARR14(2)                 --------->YAB1      <------MYB83   --------->ATHB12           --------->YAB1       <-----------GT1------>ZmHOX2a(2)            <---------ZAT6             <---------YAB1 --------ZAT6   <---------ATHB12    <---------AtMYB61 <---------ANAC46      --------->YAB1 ----DOF2     --------->WOX13(1) --------->ATHB12  --------->ICU4      <---------YAB1     --------->ZAT6   agagttatttcacattcaatcagatcggccgtacacgattggtcgaagtagtagtgatgggttttgcgattttgttattgatcatagctctatcagtaga  2341000                                                            <-----------GT1                                                     <---------ANAC58        <---------ZAT6                                                     <---------ANAC58      --------->MYB52(2)                                                     <---------ANAC46     <--------P                                                   <---------RAP2.3(1)   <---------MYB52(1)                                                   ------>NtERF2        --------->LBD16          --------->GLK1(2)                       <---------RAP2.6(2)  --------->HSFB2a(2)         <---------ARR14(2)                       <---------DEAR3(1)   <---------HSFB2a(2)         --------->ARR14(2)                       <---------RAP2.3(3) <---------LBD16         <---------GLK1(2)                        <---------RAP2.3(2)--------->MYB52(1)        <---------At4g35610                    ----------->HVH21    <---------SPL7    <-----------HVH21                <----------DOF2<------NtERF2 <---------ANAC58           --------  <<<<<<<<<TAC1          ---------->DOF2   <---------AHL20(2)     <---------ANAC58          <--------   aaacactgtcagattctatttgatagccaaagtcacaaactttatatttttgacggcgtgattcacttgccttccggtagttttagtcaagtttatgatg  2341100  Previous    Next  AGI:  At5g07400.1    Description:  forkhead-associated domain-containing protein / FHA domain-containing protein. similar to tyrosyl-DNA phosphodiesterase-related [Arabidopsis thaliana] (TAIR:AT5G15170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39513.1); similar to Os04g0403400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052698.1); contains InterPro domain Tyrosyl-DNA phosphodiesterase; (InterPro:IPR010347); contains InterPro domain HIRAN (InterPro:IPR014905); contains InterPro domain Forkhead-associated (InterPro:IPR000253); contains InterPro domain SMAD/FHA (InterPro:IPR008984) Range:  from: 2340643    to: 2345459    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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