Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <---------TOE2(3)                                     <---------TOE1(3)          <------ZmHOX2a(2)       <---------MYB52(1)                                     <---------ANAC46         --------->ARR11(3)      <-------GAMYB                                           <---------ANAC58         <---------ARR11(3)     <------MYB83<-----------GT1                         <----------DOF2        --------->GLK1(1)       <------MYB46(1)                               --------->ANAC58      <------ZmHOX2a(1)         <---------DEAR3(2)                            --------->ANAC58 ----------->HVH21              <---------MYB46(3)                            --------->ANAC46 ------->At4g35610             <---------DEAR3(1)      ------>ZmHOX2a(1)     --------->WOX13(1)    <- ->AHL20(2) ---------->DOF2  <-----------HVH21  ------>ZmHOX2a(1)   <---------At5g28300  <---------ANAC58   catctgaaggagatcaaagagttttcaaatgggtcggttaaggttttatcctgtttcctcttggatgtattacagtgatcaagcaacttttgagtgtatt  2316800                                                                                        <---------TOE2(3)                                                                                 <---------HSFB2a(2)                                                  --------->YAB1                 --------->HSFB2a(2)               ----------->GT1                    -------->HAHB4                <---------LBD16 -----           ------->GAMYB                         --------->ICU4    <---------ANAC58    --------->MYB52(1) ----------RAV1(1)                             --------->YAB1      <---------ANAC58    <-----------GT1   tgtgttgtttcaacagcatgtaaattatctaatgaaatttcggtcgaagtaataatacaacttcgttttgcttctattttcttctggattaacgatttta  2316900                                                                                             <-------TEIL                                                                                           <---------ARR14(2)                                                                                           --------->ARR14(2)                                                                                          <------ZmHOX2a(1)                                                                                        <---------TOE1(2)                                                                    ------>ZmHOX2a(1)  --------->LBD16                            <---------ANAC58             ----------->GT1              <---------TOE2(1)       <---------------AGL15<---------ANAC46        --------->AHL20(2)                <---------TOE1(1) ------>GT1                 <---------ANAC58     ----------->GT1   <---------MYB59 <-----------HVH21   gtaaaaatactcatttgggagaaaccaatttcttgggtctaggtttgaatgagataaaatggttaacttcctaaccttctaagagtgtccgaggattcat  2317000                                                                       <----------DOF2                                                                     --------->ABI4(2)                                                                  <---------DEAR3(2)                                                                 <---------DREB2C(2)                                                                 <---------DEAR3(1)                                                                 <---------At1g77200                                                                 <---------DEAR4(1)                                                                <------NtERF2                                                               <-----------HVH21                                                              --------->O2                                                              <---------TGA1a                                                              ====================bZIP_DOF                                                             ------->MYC2                              <------ZmHOX2a(1)              <-------MYC2                    <---------WRKY12                         <-------MYC3                 <---------ANAC58                    <---------WRKY38(1)       <---------ANAC46--------->TGA1a             <---------ANAC58                  <-----------HVH21     <---------STY1(1)   --------->ANAC58         <---------bZIP60(2)               <-----------RAV1(2)      --------->STY1(1)   --------->ANAC46         <---------ANAC58            --------->PCF2 <-----------RAV1(2)----------->GT1------->MYC3            <---------ANAC58     <---------YAB1--------->WRKY18(1)----------------->AGL1--------->ANAC58    <---------AtLEC2 ----   tcgcattctaattgggcccaggtcaaggcccaggaccaggccctagtggggtaaaattttgcacgcgtcggtgctttgttttggatgacttggcgagagg  2317100                   <---------ANAC58                   <---------ANAC58                            <------MYB46(1)                  <------NtERF2                        <---------ANAC58             --------->TGA1a                           <---------ANAC58                           ---             <---------TGA1a                      <---------ICU4            <---------TOE1(1)     <--             --------->O2                     <<<<<<<<<ARR2--------->MYB52(2)           ----------->GT1             <---------O2      <------------CBF--------->YAB1  <------MYB83 <---------TOE2(1)  <-----         <-----------HVH21    --------->ATHB12<---------ATHB12<---------TOE1(2)     ---------->DOF2        <---------ZAT6       <-------TEIL   --------->WOX13(1)<---------TOE2(2) <------ZmHOX2a(1)---- ------->HVH21  <---------DEAR3(1)        ------------>CBF<-------TEIL  --------->CCA1(2)  ----------   tgatagggtagtgtcacgttggcgagcgatattcattggaagataacaatcaaaatgacgttcgtaggtctaagaaatacgaggactaaagagtaaagaa  2317200 ------>ARR11(3) -------ARR11(3) ----GLK1(2) ------>ZmHOX2a(2)      <-----------GT1                                               <-- ----->RVE1(1)*TSS--------------->AtSPL8                             <---------MYB52(1)         ----- >DOF2     --------->AGP1        --------->MYB111(1) <---------AHL20(2)   ---------->ID1       ------   tatctctctctctgatctacttagtacttacttagtagttacttctctgtcttatttgattttgagtctctgttttgtctcttctcttgagattgcgata  2317300                                                                                           <---------                                                                                          <------MYB83                                                                                          <------MYB46(1)                                                                                      --------->MYB55(2)                                                                                      --------->ATHB12                                                                                ------>MYB83                                                                                --------->MYB52(1)                                                                                ------>MYB46(1)                                                                               --------->MYB55(1)                                             <---------ANAC58                 --------->AtMYB61                                         <----------DOF2                      <---------MYB55(2)                                     ---------->ID1             <---------At4g35610   <---------MYB46(3)                   <-------TEIL      <---------CCA1(2)     <---------ZAT6     <---------MYB59      <-    --------->MYB52(1)           <---------ANAC46<---------ANAC58             --------->MYB46(3)   <- -------YAB1  <-----------GT1  <----------DOF2<----------DOF2   --------->At4g35610  <---------YAB1<- ---->YAB1 <---------ICU4    <---------At4g35610 <---------ANAC58      ----------->HVH21<---------WOX13(1) --->ICU4<---------GLK1(2)<---------At4g35610<---------ANAC58  --------->MYB52(2)   --------->At5g28300   atgagagaacggattattacattcgtttcgctgcttcttgtagctttgctttcgtttcccagtgttagctactgtgacgaccaaacggtgattggtcact  2317400                                                                           ------>ZmHOX2a(1)                                                                         ------>ZmHOX2a(2)                                                                        --------->GLK1(2)                                                                        <------ZmHOX2a(2)                                     --------->GLK1(1)                 --------->ARR11(3)                                    --------->ARR14(2)                 --------->ARR14(2)                                    <---------ARR14(2)                 <---------ARR11(3)                                    ------->TEIL                       <---------GLK1(2)      --------->DAG2                <---------ARR11(1)                 <---------ARR14(2)     ---------->DOF2               <---------CCA1(2)                   --------->AGP1 --HVH21     ------>ZmHOX2a(1)     <---------GLK1(2)                  <---------At4g35610        <--- --------ANAC46        <---------ARR11(3)                            ----------->ARR10          <---- --------ANAC58        --------->ARR11(3)                  <XXXXXXXXXXXXXXXXXXXXXMIR850 ----------->HVH21 --------ANAC58  <---------AHL20(2)<---------ARR14(1)     <-----------RAV1(1)     ------->TEIL-------   tccttgaaaaagttcctattttaaagatttgttcatcgaatctccagtaacatggtgtttttgttgttgttcagatcctgtatgaatcgtttgacgagcc  2317500                <---------DEAR3(2)                                                                 --       <---------DEAR3(1)                    --------->ANAC58      <---------ANAC58               <--    <---------MYB46(3)      --------->At4g35610        <------NtERF2                          <------   <---------AtMYB61        <---------At4g35610   --------->bZIP60(2)          <---------AHL20(2) <-- -------DOF2   <---------MYB46(3)            --------->ANAC58      <---------ANAC46           <------ -----DAG2 <---------MYB46(3)          <---------TOE2(3)           <---------ANAC58        <--------- >TEIL <---------MYB46(3)---------->DOF2   ---------->DOF2      <---------ARR14(2)    <<<<<<<<<MYB2<-   ttttgatggtcgctgggtcgtttcagagaaagctgaataccaaggtaaagccatgtcgtcgtagtgaattcgtgttttgaattttttggttttctttcgt  2317600    ----------->GT1 ------->At4g35610 ---------RAV1(1) ---ANAC58                                      --------->DAG2          --------->ATHB12 -------MYB46(3)                              ---------->DOF2          <---------AHL20(2) ---ANAC58                                  --------->YAB1             <---------YAB1 -DOF2                     <---------ZAT14 <<<<<<<<<ARR2  ---------->DOF2                          <- ------GAMYB              <---------ZAT6   <---------ATHB12      <---------AtMYB61          ---------   ctgttgaagtaaaaacaagttagaattagtgtaatggaagttacaatcaaaagggggtcttaaagttttggtttttattggaacagatttagaaatgttt  2317700  Previous    Next  AGI:  At5g07330.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G63060.1); similar to unknown [Xerophyta humilis] (GB:AAT45004.1) Range:  from: 2315981    to: 2316875    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g07340.1    Description:  calnexin, putative. Identical to Calnexin homolog 2 precursor [Arabidopsis Thaliana] (GB:Q38798;GB:Q9LY26); similar to calnexin 1 (CNX1) [Arabidopsis thaliana] (TAIR:AT5G61790.1); similar to calnexin [Glycine max] (GB:BAD81043.1); similar to putative papillar cell-specific calnexin [Brassica napus] (GB:AAK84429.1); similar to Calnexin homolog precursor (GB:Q39817); contains InterPro domain Calreticulin/calnexin, P; (InterPro:IPR009033); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); contains InterPro domain Calreticulin/calnexin; (InterPro:IPR001580); contains InterPro domain Concanavalin A-like Range:  from: 2317214    to: 2319650    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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