Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           ------>ZmHOX2a(2)                                       <---------AGP1                                       --------->ARR14(2)                                       <---------ARR11(3)                                       --------->ARR11(3)                         --------->YAB1 -ANAC58              ----------->GT1  <---------ARR14(2)       <---------HSFB2a(2) -ANAC58          <---------YAB1      <---------CCA1(2)         --------->HSFB2a(2)              ---- -MYB46(3)  --------->ZAT18  ----------->GT1             <---------ARR11(3)      <------ZmHOX2a(2) -ANAC46    <---------WRKY12 --------->YAB1              --------->ARR11(3)     <---------ARR11(3) -HVH21     <---------WRKY38(1)   <---------ANAC46   ---------->DOF2            --------->ARR11(3)   agtcagagtcagagtcaactatacttgtaaatcgtaacttggatcttaatgtataaaaagatagttttagaagaaacaacaagatcataaaactattaca  2313200                                            --------->LBD16                                            ----------->GT1                                      <-----------HVH21                                     --------->bZIP60(2)                                     --------->ANAC46                                   <---------ALFIN1                                 <---------ARR14(2)                              --------->GLK1(2)                                     --------->ARR14(2)                              <---------ARR14(2)                           ---------->DOF2          <                              --------->ARR14(2)                          --------->AHL20(2)        <                              <-----------ARR10                           <---------AHL20(2)>>>>>>>>>TBF1     ----------->GT1--------------->AGL15 <---------LBD16         ----------->GT1   --------->TOE1(2) ----->ANAC46 <-----------GT1<---------GLK1(2)                  ---------->DOF2----------->GT1 ------   aacaatagggatatatatacttctcgttagagaatctacacatcaccggaaaaataagagaaaacagaaagaaaaattaaagagaaaatacgaagaagaa  2313300                                                                                           <---------MYB59                                                                                          <---------At4g35610                                                                                          --------->At4g35610                                                                                      --------->DEAR3(2)                                 <---------MYB52(1)                               ------->GAMYB                               <---------ANAC58                                  <---------ANAC55(2)                               <---------ANAC58                                  --------->ANAC55(2)                          <---------ANAC58                                       --------->ANAC58                          <---------ANAC58          <-----------RAV1(1)          --------->ANAC58                        <<<<<<<<<<WRKY63           ------>ZmHOX2a(2)           <---------DOF5.7(2)                       --------->WRKY38(1)       <---------ARR11(3)            --------->MYB52(1)  --------->ATERF1(1)--------->At4g35610     --------->TOE2(3)               --------->ARR11(3)  <------NtERF2      <---------At4g35610     <---------ANAC58               --------->YAB1--------->ZAT2 ---------ANAC58     <-------GAMYB --------->MYB52(2)  <---------MYB46(3)---------->DOF2  <---------ZAT2 ---------ANAC58    <-----------RAV1(1)      <---------ANAC58    --------->ARR14(2) <---------ARR14(2) ---->DOF2  <----------DOF2    <---------ANAC46  <---------AGP1  <---------ARR14(2) --------->ARR14(2)   aggcgtagccttccctttgcctctgttgacttgccgtttgttttcttccttgatctgttgttaaccagaaccagagaaagataacggaaccgagctaact  2313400                                                                 --------->ARR14(2)                                                                 --------->ARR11(3)                                                                 <---------ARR11(1)                                                                 <---------ARR14(2)                                                                 <---------ARR11(3)                 ------->PIF5                                   <---------CCA1(2)                  --                 <-------PIF5            <------------------------ANAC81                  --------->YAB1          --------->ZAT2                 <----------DOF2    ------>ZmHOX2a(1)   ------>ZmHOX2a(1)  <-          <---------ZAT2         <------NtERF2           ------>ZmHOX2a(1)     --------->TOE2(3)  --- <---------MYB52(1)            <---------DEAR3(1)<---------MYB52(1)   <----------DOF2   <---------TOE2(3)   tccattagccgtagctcgacgtgcttcttaacgtcgtcgtcttctttctcggtttcttcctcctccatatctctttcccttccttagattaatgaaaacg  2313500                 <---------ANAC58                 ----------------------->TaNAC69(2)                                              <---                 <---------ANAC58                                       <---------ARR14(2)       <---              <--------P                                                --------->ARR14(2)       ----            <---------MYB46(3)                                         --------->GLK1(1)         <---         --------->MYB52(2)                                       --------->PCF2       --------->AHL20(2)       <---------MYB52(1)                           --------->YAB1--------->PCF5       <-----------TBP    <------------AtMYB77                  --------->ANAC46        <---------TCP20      <---------AHL20(2)  --------->MYB52(1)                      --------->ANAC58   <---------At4g35610     <-----------TBP ------->At4g35610                        --------->ANAC58   ----------->RAV1(2) --------->TOE1(3)  - --------At4g35610<----------DOF2       <---------ALFIN1   --------->REM1(1)     --------->TOE2(3)  < ---->TEIL  --------->MYB55(2)--------->ANAC46   --------->YAB1 *TSS   <---------CCA1(2)   <---------AHL20(2)   aagctaactgttagtggttgctttagtcttctacgtctctcttcaccccatttataatgcttcatctggtcccatatccaaaaccttatatatataatgg  2313600                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                 ----                                                                                                 ----                                                                                                 ----          --------->YAB1                                                                        -----      <---------YAB1          <---------ARR11(3)                                               <-----   <---------AHL20(2)         --------->ARR11(3)                                               <-----   <---------YAB1             --------->AHL20(1)                                               <-----   --------->AHL20(2)         <---------AHL20(1)                                               <----- ------ANAC46   <------------CBF                                                              ------- ------ANAC58  -------->ATHB1 --------->AHL20(2)           <---------TOE2(3)         ---------->DOF2 ------->GT1   --------->ATHB51<---------AHL20(2)   <---------ANAC58                 ================ ------ANAC58 <---------YAB1  <---------AHL20(2)    <---------ANAC46           <----------DOF2------- -------->ARR14(2)       ------------>CBF           <---------ANAC58           ====================== ---------ARR14(2)      <-----------GT1        <---------ICU4              <---------GLK1(2)<--------   cgtatattattatcgtattattgtttaaacaatatattttaaacatgaattatgtcttgttaagttttcgacccatggaatctttttgaaagttatacct  2313700    --------->At5g28300   ----------->GT1   <---------DEAR3(2) ------->O2 --------O2 ------->TGA1a --------TGA1a -->MYB46(1) ----->MYB52(1) -->MYB83   <---------AHL20(2) ---->MYB55(1) ----MYB59  --------->AHL20(1) ----MYB46(2)                       ------->TEIL                 -------->ATHB1 ----MYB111(1)            --------->YAB1  --------------->AGL15  --------->ATHB51 ----MYB52(2)<---------AHL20(2)<---------ANAC58                  --------->ATHB12 -->ANAC46  --------->AHL20(2) <---------ANAC46     --------->GLK1(1)      <---------TOE2(3) ========bZIP_DOF        <---------YAB1   <---------------AGL15  <---------ICU4 -->ANAC55(2)--------->AHL20(2)<---------ANAC58     <---------GLK1(1)     ---------->DOF2 ========bZIP_DOF <-----------GT1 <-------TEIL ---------->DOF2  <---------YAB1--------->ARR11(3)    - ---GT1 --------->ICU4  --------->AHL20(2)<----------DOF2      <----------DOF2<---------ARR11(3)   --   aacgtcggtaaaaatttaataaacatttttataacgtgcatctacttttaaaagaaatccatttgcattattgcattaaagatgtttaagcatttggctc  2313800                                                           <---------------AtSPL8        --------->ZAT14                               <---------ANAC55(2)  --------->MYB52(1)                                  --------->ANAC55(2)  ----------->RAV1(1)                     <----------DOF2<-------TEIL -------->LBD16                 --------->DAG2       --------------->AtSPL3 ------->ANAC46                ---------->DOF2  <----------DOF2                         <---------TOE2(3)   tccccaacagtttagttcaaattgtttgatagaaaaagttgtttctttttcttttcacgtacaagtacaacgcttgattctaaacattttaagttaaatt  2313900                                                                        <---------REM1(1)                                                                --------->YAB1                                                               <---------AHL20(2)           <--------             ---------->DOF2                                   <---------YAB1               ---------          <-----------GT1         --------->YAB1              --------->AHL20(2)            ---------         <XXXXXXXXXXXXXXXXXXXXMIR396B                         <---------AHL20(1)           --------->CCA1(2)        <XXXXXXXXXXXXXXXXXXXXMIR396A                          --------->AHL20(1)          <---------ARR11(3)  --------->TOE2(3)              <---------ATHB51 --------->ATHB12   <---------ZAT6       --------->ARR11(3)   tgaaccatagtttaacaaagttgtcgaaaaactcaattatactgcaaatgaacgatttgaacaatataatagtgttgaagctagtggaataagatatatt  2314000                                                             --------->AHL20(2)                                                             --------->ATHB51                                                             <---------AHL20(2)                                                             <---------ICU4                                                            --------->ICU4<------NtERF2                                                          --------->YAB1 <---------DEAR3(2)         ----------->HVH21                               --------->AHL20(2)    <---------TOE2(3)       <---------MYB46(3)           <---------AHL20(2)                       <--  ---------->DOF2          <---------AtMYB61           <----------DOF2   ------>NtERF2      --------- -ARR11(3)                 --------->ALFIN1         <---------YAB1      <---------DEAR3(1)  <-------- >ARR11(3)        <---------HSFC1(2)              -------->ATHB1 <---------AHL20(2)        <---------CCA1(2) >AHL20(1)        --------->HSFC1(2)             --------->ICU4<---------YAB1       <-----------GT1   cagacaaaggtatgacaagaagtatcgaggtggtttctgtagagggatggaattattctttaattattttttcgtcggcatagtttttgctatatatctt  2314100  Previous    Next  AGI:  At5g07322.1    Description:  other RNA Range:  from: 2313120    to: 2313564    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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