Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <-----------GT1             <---------YAB1                                                              <-------TEIL            <---------AHL20(2)                          <---------GLK1(1)             --------->ANAC58     <-------TEIL                                       --------->GLK1(1)        <-------TEIL  <---------ANAC58                               <---------YAB1                <---------ARR14(2)  <---------ANAC46                              <----------DOF2                <---------GLK1(2)  <---------ANAC58                             <---------ICU4    --------->TOE2(3)    --------->ANAC58 ---DOF2  <---------AHL20(2)       <----------DOF2--------->ATHB12             --------->ARR14(2)   catagcgttcatattattttacattcttctattagagcttttctactaatctttattgatatccatttcttaacttgttcagattcacacgtacacattt  2305300                 --------->DAG2                ---------->DOF2       --------->ZAT14          <---------------AtSPL8            <---------ATHB12     <---------CCA1(2)    <---------ZAT14     --------->YAB1          --------->ANAC46         <-------TEIL                          <--------     <---------ICU4          --------->ANAC55(2)      --------->ZAT14              ----------->GT1  -    <---------ATHB12       <-----------GT1          <---------ZAT18        <-----------GT1 ----------    --------->ICU4   <----------DOF2  <---------ZAT14 --------->ZAT18   <---------ARR11(3)<----------   tttgcaataatcaaatcaaaaagcttttttcacgcgtctctacagttttagcagggtacactgatatagtacatgattttctatatcgaaaattacaata  2305400                                                --------->DOF5.7(2)                                               --------->TOE2(3)                <---------AHL20(2)            ----------->GT1                --------->AHL20(2)           <---------TOE2(3)               --------->AHL20(2)          ----------->HVH21               <---------AHL20(1)          ----------->TGA1           --------->AHL20(2)             <----------DOF2                                          <-           <---------AHL20(2)             <---------WOX13(1)                                       -- -YAB1  <---------AHL20(1)               <---------AtLEC2                                   --------- ---------->GT1<---------AHL20(2)        <---------ANAC58                              --------->ANAC58 -->CBF --------->AHL20(1)               <---------ANAC58                              --------->ANAC58 -GT1  --------->AHL20(2)              <---------YAB1                     <---------TOE1(2)----------   gctagaaaaatatataatttttttaaaaatatgcaaaacttctgcttgacgttaaattttgttttgtcatttgtcttatgttcacacagacgaaaaagct  2305500                                         --------->ARR11(3)                                         <---------AHL20(1)                                        ----------->TBP                                      --------->AHL20(2) ----------->TBP                --------->TOE1(3)                                                   - --------HSFB2a(2)              --------->TOE2(3)  <----------DOF2                             <xxxxx ------->HSFB2a(2) <---------ZAT18    <---------AHL20(2)                    <----------DOF2  -------- >DAG2           --------->At4g35610  --------->YAB1                   <----------DOF2       -------- >DOF2 ----------->GT1     ---------->DOF2  <-----------GT1   ------>ZmHOX2a(1)              --------   tctataaaaccgtcaaaatagctcacccctaaaaccctaattatatattccctctttcattctccttcttcgtcttttctttgtttctcatattcaagac  2305600                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                    --------->TOE2(3)             --------->TOE1(3)                                                                    <--             --------->TOE2(3)                  ----------->RAV1(2)                               ---           --------->ARR14(2)                   --------->At4g35610                           <------ZmHOX2a(1) ------>ZmHOX2a(1)  --------->TOE1(3)           <---------At4g35610                        <---------LBD16 ------------>CBF  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                              ---------------- -------->TOE2(3)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     ----------->GT1          <---------ANAC46 xxxxxxxxxxxxxxxxxsmallRNA(l2)               <------ZmHOX2a(2)                 --------->ICU4 xxxxxxx ->ANAC58  <---------ARR11(3)               --------->ARR11(3)       --------->ARR11(3) --------->ARR14(2) ->ANAC58  <---------ARR11(1)               <---------ARR11(3)       <---------ARR11(3) <---------ARR14(2) ->ANAC46 <---------CCA1(2)        ------------>CBF    ---------->DOF2       ---------->DOF2 --------   atcctcaattccaaatcttaaaccctaaatttacagacacaatcgagatcacctgaaaaaagaggtttaaagattttagcaaagatggcgaattcaggaa  2305700    ---------->DOF2 <---------TOE2(3)                                     <---------YAB1 -------ATHB51                                         --------->ICU4 ------>ICU4                                         --------->YAB1                      <------ZmHOX2a(2) ->AGL1                     ------->TEIL            <---------ATHB12               ------>NtERF2 xxxxxxxxxxxxxxxx>smallRNA(se3)          ---------->DOF2  <---------YAB1 <----------DOF2--------->ARR14(2) ->LBD16      <----------DOF2        ---------->DOF2--------->ICU4   <-----------GT1    <---------ARR14(2)   attatggaaagaggccctttcgaggcgatgaatcggatgaaaagaaagaagccgatgatgatgagaacatattccctttcttctctgcccgatcccaata  2305800                                                                    ----------->RAV1(1)             =                                                                   ------->GAMYB                    -                                                             <---------ICU4                        <-                                                          --------->YAB1                          <--                                                         <---------YAB1            <---------ANAC46==                                                       --------->YAB1  --------->TOE2(3)          ---                                 --------->ATHB12 --------->ZAT2  --------->MYB46(3)              <--                              --------->ANAC58    --------->At4g35610------>MYB83<---------ANAC46 <--    <---------ANAC58          --------->ANAC58    <---------At4g35610------>MYB46(1)              ---    <---------ANAC58    <---------WRKY18(1) ---------->DOF2  --------->YAB1-------->P             ---   <-------TEIL        --------->WRKY38(1) --------->AtMYB61<---------YAB1 ------->TEIL --------->YAB1   tgacatgcgtgccatggtctcagccttgactcaagtcattggaaaccaaagcagctctcatgataataaccaacatcaacctgttgtgtataatcaacaa  2305900              <---------ATERF1(1)              ------>NtERF2             --------->ARR14(2)             <---------ARR14(2)           <---------ATERF1(1)          --------->DEAR3(1)        --------->MYB52(1)        -------->P        ------>MYB46(1)        ------>MYB83       <---------ALFIN1       --------->MYB55(1)      --------->MYB46(3)      <---------MYB55(2)      ------->GAMYB    >>>>>>>>>MYB98  ------>ZmHOX2a(1)  ==================================HOX2a_HOX2a <---------MYB59 =======================HOX2a_HOX2a ----->ZmHOX2a(2) -----ZmHOX2a(2)                <---------TOE2(3) -------ARR14(2)             <------ZmHOX2a(2) =======================HOX2a_HOX2a        <---------------AGL15 ------>ARR14(2)            <---------ARR11(3) -------ARR11(3)            --------->ARR11(3) -------ARR14(3)   <---------ALFIN1      <-----------GT1 ------>ARR14(3) ===================HOX2a_HOX2a ------>ARR11(3) ------>ZmHOX2a(1)       <---------AHL20(2)      <-----------GT1   gatcctaacccaccggctcctccaactcaagatcaaggtatatttacatatatagttgacaaattagttaccatatttatgggatgatatatgtgaatga  2306000                                            --------->SPL7                                         <---------HSFB2a(2)                           --------->AHL20(2)                                         --------->HSFB2a(2)                         ----------->GT1                   --------->YAB1    <---------ZAT14           ----------->GT1 <---------AHL20(1)                  <---------YAB1     --------->ZAT14 <---------ARR11(3)        --------->ARR11(3)                --------->YAB1       --------->ZAT18 --------->ARR11(3)        --------->AHL20(1)      --------->YAB1      --------->At4g35610  <---------------------WRI1      <---------ARR11(3) ---   aaaaatgagcataatgttttataatagcagttgaatttgtgctctggacgacgaatatatccatgtagtatatatgagaaatatatcaagtatatatacg  2306100                                                                                              -------                                                                                              -------                                                                                              -------                                                                                             <-------                                                                                             ------>ZmHOX2a(2)                                                                              --------->ZAT2 <-------                                                                              <------NtERF2--------->ARR14(2)                                                                              <---------At4g35610   -                                                                              --------->At4g35610 ---                                                          ------->GAMYB --------->ALFIN1   <---------ARR14(2)                                                         <---------MYB52(2)   <---------ZAT2<------ZmHOX2a(2)                                        --------->ZAT14  --------->MYB46(3) <-----------RAV1(2)------                                        <---------ZAT14--------->MYB52(1)--------->ZAT18<---------HSFB2a(2)                           <---------TOE2(3)     <--------P          --------->DAG2    <---------LBD16 ---->TEIL   --------->ATHB12<------ZmHOX2a(1) ----------->GT1      ---------->DOF2  --------->GLK1(2)   aatgttttctcttgttgattagggctattgaggaagaggcactatagaggggtaagacaacgaccatggggaaagtgggcagctgaaattcgggatccgc  2306200  Previous    Next  AGI:  At5g07310.1    Description:  AP2 domain-containing transcription factor, putative. Identical to Ethylene-responsive transcription factor ERF115 (ERF115) [Arabidopsis Thaliana] (GB:Q9LY29;GB:A0MFE2); similar to AP2 domain-containing transcription factor family protein [Arabidopsis thaliana] (TAIR:AT5G61890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68696.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 2305685    to: 2306661    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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