Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <---------ARR14(2)                             --------->ARR14(2)                            <------ZmHOX2a(1)       <----------ID1            --------->YAB1                          <---------TOE1(2)         --------->ANAC58       <---------ICU4                         <---------LBD16       --------->At4g35610         --------->YAB1                         --------->LBD16       <---------At4g35610        --------->ICU4                        <---------TOE1(1) <------MYB83                --------->AHL20(1)                        <---------ANAC46  <------MYB46(1)             --------->AHL20(2)                     <---------ARR14(2)  --------->MYB59         --------->AHL20(2)                     --------->ARR14(2)  <---------AtMYB61       <---------AHL20(2)            ----------->RAV1(1)  <---------LBD16    --------->ANAC58  <---------AHL20(2)        <----   agtgcctagttgaacaacattcagttccgaggatttggggagtttggtctgcaaacgacaagacgaataaaataaaataatgagaaatacactatttagt  2271500                                                                                 --------->ATHB12                                                                                 --------->ATHB51                                                                              <---------------AGL15                                                                        --------->ARR11(3)                                                                        <---------AHL20(1)                                                                        --------->AHL20(1)                                                                  --------->ANAC58          <--------                                                                  --------->ANAC46        <---------ICU4                                      ------>ZmHOX2a(2)           --------->ANAC55(2)    <---------YAB1                                     <------ZmHOX2a(2)            --------->ANAC58 <---------WOX13(1)                                    --------->ARR14(2)          <-----------GT1 <---------AHL20(2)                                    <---------ARR14(2)         <---------YAB1 --------------->AGL15                                    <---------AGP1           --------->ATHB51<-----------------AGL2                                    --------->ARR11(3)       <--------HAHB4  ----------------->AGL3                                    <---------ARR11(3)       <---------ICU4  ----------------->AGL2                              <---------YAB1                --------->ICU4   <-----------------AGL1                              ----------->HVH21             <---------YAB1   <-----------------AGL3                 <---------MYB46(3) --------->AGP1     <-----------GT1  <---------ARR11(3)--------->ATHB12             <------MYB83  --------->ICU4      --------->ARR11(3) <---------ANAC55(2)    --------->ICU4 -----ZAT6   <------MYB46(1)<---------ICU4     <---------ARR11(3)<---------LBD16<---------YAB1-------   gttttgttttgaatttggtttgttcaatacttatgacagatctattgaatatcgttttcaccattattacggaatattttctataattggcatcattgta  2271600                  --------->ALFIN1                <---------ANAC58           --------->ANAC46                <---------ANAC58 --------->ANAC58    <----------DOF2              --------->ANAC58   <---------ANAC58    <------MYB46(1)     --------->ANAC58   <---------ANAC58    <------MYB83        --------->ANAC58                               --------->MYB52(1)   <---------ANAC46   --------->MYB59      --------->AtLEC2                     ----------->GT1 -YAB1          <---------ANAC46 --------->ANAC46                             ---------->DOF2 -->ZAT14<---------YAB1----------->GT1   <-----------RAV1(2)      <-----------GT1         -------->P   gtcttgcttttacaataggcgtgttaggttaacatatgcaacttcaggcaaaactcaattcaaattttaaaccaggtttcaaaagtaaaaactaccagag  2271700                                        --------->MYB55(2)                                        --------->MYB52(2)                                        <---------MYB46(3)                                   --------                                        <------MYB83                                     --------->MYB46(3)                                        <------MYB46(1)               <------MYB46(1)  <---------ARR14(2)                                       <---------TOE1(2)           --------->CCA1(2)   --------->ARR14(2)                                       <---------TOE2(2)  ------>MYB83<------MYB83   --------->LBD16                            ---------->DOF2               ------>MYB46(1)          <---------LBD16                       ----------->GT1<---------MYB52(1)--------->AtMYB61       <---------ZAT14 <-------TEIL       <---------ATHB12--------->ATHB12    <---------MYB59      <---------ANAC46--------   agattcacattgacaaaatcaaatgatgtaaaaaggaatcgttggtttgaagtttgaaccaaaccagagatttggtttggagtagaccggaaccactgac  2271800                                    <---------ANAC58                                    <---------ANAC58                                  <---------ANAC58                                  <---------TGA1a                                  <---------O2   --------->ANAC58                                  <---------ANAC46                                  ======================MYC_MYB                   <------ZmHOX2a(1)<---------ANAC46                        ----------->GT1               =============================bZIP_DOF                       --------->DAG2               ---------->DOF2    <---------bZIP60(2)            <---------ANAC46       =====================================bZIP_DOF  <---------WRKY18(1)  <---------TOE2(3)      <--       ---------->DOF2------------>CBF           --------->ANAC58<---------ANAC55(2)         <------- --->HVH21    <---------WRKY12 ----------->HVH21------->GAMYB    --------->ANAC55(2)  ----------->TBP ->WRKY12     <---------WRKY38(1) <---------ANAC58   ----------->HVH21 <---------AHL20(2)  ------->TEIL   ctattgactaaaagagtcaaaggatgcaatcttgtgacgcgtgtaatcaacgcgcatgacctatggtccgtattaaaaaggttactctatatgtatcaca  2271900                                                                                       --------->HSFB2a(1)                                                                                       --------->HSFC1(2)                                                                                --------->TOE2(3)                                                                          --------->TOE2(3)                                                                        <---------ARR11(3)                                                                        --------->ARR11(3)                                         <---------ANAC58              --------->CCA1(1)    <--------   <---------GLK1(2)*TSS    <----------DOF2                          --------->AHL20(2)<---------HSFB2a(1)  <---------At4g35610     <------------------------ANAC81     ----------->RAV1(1)      <---------HSFC1(2) --------DOF2    <------------CBF        <---------ANAC58    <----------ID1     ------->GAMYB ----GT1      ------------>CBF   <----------DOF2       ---------->DOF2 --------->RVE1(1)--------->KAN4(2)   ctttagcttctccattcccaattgtctcttcttttctttttgtacttgtcaaaaacaaaaagaacaacaaaaaaaatctcaaccgtagaaaattccgaca  2272000                                                                                 --------->MYB46(3)                                                                               ------>MYB46(1)                                                                             --------->DEAR3(1)                                                                            --------->ANAC55(1)                                                                            --------->ANAC58                                                                          <---------ALFIN1                                                                        ----------->RAV1(1)                                                                    --------->DAG2                                                                  ---------->DOF2--------->DEAR3(2)     <---------At4g35610                                       --------->ANAC58--------->MYB52(1)  <---------ZAT14                                              --------->ANAC58------>MYB83    ------  <---------------------WRI1                               --------->ANAC58 --------->ANAC58   <----- -ETT(1)                          <----------DOF2          --------->ANAC58 --------->ANAC46   <-----   agagttcagttcatacaatgaactaagtatgggtttctttggaagactgttcggaagtaagaagcaagaaaaggcaacaccgaacagacgaagatggagc  2272100                                                        --------->ALFIN1                                                      <---------ANAC58                                                      <---------TGA1a                                                      --------->O2                                                      --------->TGA1a                                                      <---------ANAC58            ------>ZmHOX2a(1)                         <---------bZIP60(2)          ------>ZmHOX2a(2)                           <---------ANAC46        --------->ARR11(3)                            <---------O2        <---------ARR11(3)                   --------->ANAC46        <---------GLK1(2)                    --------->ANAC58                                       <        --------->AGP1                --------------->AGL15                       <------NtERF2     -        --------->ARR14(2) --------->ATHB12  --------->ANAC58                    ------>NtERF2     <-        <---------ARR14(2)--------->ICU4   ---------->DOF2         --------->ARR11(3)--------->ANAC58 --->At4g35610       --------->LBD16  <---------YAB1 <-----------------------TaNAC69(2)            <- ----ZAT2<------ZmHOX2a(2)<---------YAB1   =====================bZIP_DOF        <----------ID1    --- ----At4g35610      --------->LBD16   <---------------AGL15        <---------ARR11(3)--------->ANAC58   ttcgctactagatcctcacatcccgagaatgattcgtcttctcattcaagcaagagacgtggggatgaagatgtcttaaacggcgacaagcatgcgatag  2272200                                                         <---------ANAC46                                                        --------->ATERF1(1)                                                        --------->RAP2.3(1)                                                        <---------LBD16                                                        <---------At4g35610                                                        <------NtERF2                                                        --------->At4g35610                                                       <---------RAP2.6(1)                                                       <---------RRTF1(1)                                                       <---------ERF1                                                       <---------RAP2.3(1)                                                       <---------ATERF1(1)                                                       <---------ORA47(2)                                                      <---------RAP2.6(2)                                                      --------->ALFIN1                                                      <---------RAP2.3(2)                                                      <---------RAP2.3(3)                                                      --------->ATERF1(2)                                                      <---------RRTF1(2)                                                      <---------RRTF1(3)                                                      <---------ATERF1(2)                                                      <---------DEAR3(1)                                                      <---------ANAC46                                                      --------->DEAR3(1)                                                     --------->ATERF1(1)              <---------At4g35610                    <------NtERF2              --------->At4g35610                    <---------ABI4(1)              --------->ZAT2                         ------>NtERF2            --------->REM1(1)                       <---------ORA47(2)        --------->At4g35610                         <---------ATERF1(1)        <---------At4g35610                         <---------RAP2.3(1)     <---------ZAT2                             ------->MYC2     --------->At4g35610                        ------->MYC3     --------->ATERF1(1)                        <-------MYC2     <---------At4g35610                        ------->PIF5     <------NtERF2                              <-------MYC3    <---------ATERF1(1)                         <-------PIF5   <------NtERF2                         --------->ZAT2<---------DEAR4(2)   <---------RAP2.6(2)                   <---------At4g35610   <---------ANAC46            --------->DEAR3(1)  <---------DEAR3(1)  <---------LBD16      --------->At4g35610  <---------At4g35610 ------NtERF2 <---------ZAT2   --------->RAP2.6(2) <---------RAP2.3(2)                            --- -------->ATERF1(1)   <---------MYB46(3) <---------ZAT2------>NtERF2           <---------ATHB12  <--- --------RAP2.6(3)   --------->ALFIN1    --------->At4g35610    <---------ANAC58   <---------MYB46(3) ----------HVH21 <---------ZAT14        <-----------RAV1(1)<------NtERF2  <<<<<<<<<<<<<<<<<LFY   ---- ------>DEAR3(1) --------->ZAT14 <---------ALFIN1 --------->SPL7<---------ANAC58  <---------AtMYB61   ccgtcgcggctgctacagctgcagtggctgaagccgcactcgctgctgctcgtgcggcggcggaagtcgtgagactcaccaatggtggtagaaactcgtc  2272300                                      ----------->GT1                             <---------MYB46(3)                             --------->ABI4(2)                           <-------GAMYB                          <---------DEAR3(2)                          <---------MYB46(3)            <---------YAB1                         <---------DEAR3(1)           --------->YAB1     <---------ANAC58        <---------ATHB12 <---------At1g77200     --------->At4g35610     <---------ANAC46      <----- ------>At5g28300        <---------DREB2C(2)--------->DAG2           <---------DAG2            <----- ------DEAR3(2)        <-----------HVH21   ---------->DOF2  <-------TEIL <---------ANAC58  <---------AHL20(2) ------->GT1   <------NtERF2<---------AtMYB61    --------->ZAT2      <----------DOF2    ----------->GT1   ggtaaaacaaatcagtcggagtaatcgtcggtggtctcaagagtataaagcagctatgaagattcaatccgcttttcgtggctacttggtgagttaatta  2272400  Previous    Next  AGI:  At5g07230.1    Description:  protease inhibitor/seed storage/lipid transfer protein (LTP) family protein. Identical to Tapetum-specific protein A9 precursor (A9) [Arabidopsis Thaliana] (GB:Q00762;GB:Q67ZX3;GB:Q9LYP3); similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT5G62080.1); similar to Tapetum-specific protein A9 precursor (GB:Q05772); similar to A9 protein [Brassica napus] (GB:ABV68563.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); contains InterPro domain Bifunctional inhibitor/plant lipid transfer protein/seed storage (I Range:  from: 2270966    to: 2271611    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g07240.1    Description:  IQD24 (IQ-domain 24); calmodulin binding. similar to IQD23 (IQ-domain 23), calmodulin binding [Arabidopsis thaliana] (TAIR:AT5G62070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63692.1); contains InterPro domain IQ calmodulin-binding region (InterPro:IPR000048) Range:  from: 2271920    to: 2274289    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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