Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               ======================================bZIP_DOF             ---------->DOF2          <----------DOF2                <---------TGA1a          =========================================bZIP_DOF        ------>NtERF2                    --------->TGA1a      <------NtERF2                      =======================================MYC_MYB      --------->ATERF1(1)          --------->CCA1(2)                                              <--     <---------ATERF1(1)          --------->ARR14(2)                                   --------->ANAC58     --------->LBD16        ------->MYC3 --------->ANAC58                   --------->ATHB12     <---   <---------LBD16          <-------MYC3 --------->ANAC58                --------->MYB52(2)      <--- --------->ANAC46       ----------------->AGL2                  ------>NtERF2 --------->ICU4     ---- --------->ANAC58---------->DOF2  <---------ARR14(2) <-----------ARR10 <--------P      --------->ANAC58 --------->ANAC58==================================bZIP_DOF    --------->ANAC46   <------ZmHOX2a(1)   cacaagccggggccttaaagaaagagtccatatgcagataggcacgagacaagaggctctcatcgacaccatggttagtgattaggaagaagccatgttt  2244900                                                    <------NtERF2                                                 --------->ATERF1(1)                                                 <---------LBD16                                                 <------NtERF2                                              --------->ATERF1(1)                                      --------->AtLEC2       <----------DOF2                --------->ANAC58    ------>NtERF2                     --------->ANAC58   <------ZmHOX2a(1)    --------->ALFIN1 -----GAMYB                       ------>NtERF2<---------DEAR3(1)          --------->ATHB12 ------ANAC58                  <---------At4g35610 --------->LBD16        <---------YAB1   ---------- ------ANAC58 <---------O2     --------->At4g35610--------->DEAR3(1)<------MYB46(1)       <---------AtMYB61 ----->MYB52(2)           --------->ATERF1(1)<-----------HVH21      <------MYB83   <---------ANAC46   cgttgcagcctttgagacgagtctagtagcctccgatgccaagcacgagtcgccggagaggaaaccggctaggtctatgagtgggacttggagaggttga  2245000                                                                                                  <--                                                            --------->ICU4                      -----                                                         --------->ALFIN1                   <--------                                                     <---------ANAC58                       ---------                                                     <---------ANAC58                     --------->HSFB2a(1)                                                     <---------ANAC46                ================                                                   <---------ANAC46     <----------DOF2   --------->HSFC1(2)                       <---------DEAR3(2)        <---------ANAC58   ========================HOX2a_HOX2a                      --------->ETT(1)   <---------TOE1(3)  <---------YAB1  <---------AtLEC2---------         --------->HSFB2a(1)  --------->SPL7     <---------ANAC58   <------ZmHOX2a(1)<------ZmHOX2a(2)   --------->LBD16  <-----------HVH21    <---------TOE2(3)<---------At4g35610       --------->ARR11(3) ->GT1   <---------HSFB2a(1)<---------SPL7      --------->ALFIN1  <---------TOE2(3) <---------ARR11(3)   acatccgtagaaggtttctcgtggtcgggccatacgaactgttgaggtatgtggtgcgagtgctgattaaggagctttgcatcgaagatcgaagaatcct  2245100                                                                              <----------DOF2                                                                              ------>ZmHOX2a(1)                                                                            ------>ZmHOX2a(2)                                                                           <------ZmHOX2a(2)                                                                          <---------ARR11(3)                                                                          <---------ARR14(2)                                                                          --------->ARR11(3)                                                                         --------->GLK1(1)                                                                        ----------->ARR10                                                                    <---------TOE2(3)                                                                    <---------YAB1            -------                                                                  -------->HAHB4              <------ --------DOF2                                   <---------MYB52(1)<---------ICU4          ---------->DOF2 ->ZmHOX2a(1)                   <-------GAMYB  <---------At4g35610--------->YAB1      ----------->GT1 -ARR14(2)                     <---------MYB46(3)       <---------AHL20(2)--------->ARR14(2)  <------ >GLK1(2)                   <---------PCF2     <-------GAMYB     --------->ICU4       <---------ANAC58 ==HOX2a_HOX2a              <---------PCF5    <---------ANAC58<---------AHL20(2)      <---------ANAC46 >ARR14(2)  <-----------GT1----------->HVH21  <---------ANAC58--------->AHL20(2)      <---------ANAC58   ctttggttttgttttcactgaatatttgagggaccgttgcaatgcattccgttgccatttttttttaattatcgtagatccttttaaggcgtaaaagatt  2245200                                                     <---------MYB52(1)                                                    <------MYB83                                                    <---------DEAR3(2)                                                    <------MYB46(1)                                                   <---------MYB46(3)          <---------AHL20(2)                    <---------MYB46(3)      --------->AHL20(2)                       --------->ALFIN1     <---------AHL20(1)                    --------->ZAT14     --------->AHL20(1)                    <---------ZAT14--------->ALFIN1               <---------ANAC58    --------->AHL20(2)                    <<<<<<<<<<<<<<<<<LFY             ----------->GT1 -->ARR11(3)                          <-------TEIL<---------ORA47(1)      <---------AtMYB61    ------ ---ARR11(3)        <-------MYC3     --------->GLK1(2)<--------P   ---------->DOF2       <---------ANAC58 ---GLK1(2)         ------->MYC3---------->DOF2<---------AtMYB61  <------ZmHOX2a(1)     <-------TEIL   ttcaaaatatatataaaaaacacgttgagaggcttaaagattcagtacagtggtcggtaagtgggagaggaaaggagtggtatatataggtgcgagaggg  2245300                                          <------MYB46(1)                                          <------MYB83                                         --------->MYB111(2)                                         <---------DEAR3(1)                                         --------->MYB111(1)                                         <---------AtMYB61                                         --------->MYB46(2)                                        <---------MYB55(1)                                        <--------P                                      <------MYB46(1)                  --------->YAB1                                      <------MYB83              --------------->AGL15                    --------->ANAC55(2) *TSS          --------------->AGL15               <---------------AtSPL3 <---------MYB46(3)        <---------------AGL15          --------->ANAC58    <----------DOF2         <----------DOF2  ----------->GT1        <-----------RAV1(2) <------NtERF2<---------MYB46(3)    <-----------------AGL3       <---------ZAT14   <---------At4g35610         ===========================MADS_MADS       <-------TEIL <---------ANAC55(2)<-------GAMYB <-----------------AGL3         <---------HSFB2a(2)      --------->ALFIN1   --------->At4g35610         <-----------------AGL2         <---------HSFC1(1)    <---------ANAC58--------->ANAC58  --------->MYB55(2)       <-----------------AGL2      ------->TEIL    <---------ANAC58--------->ANAC58 <---------AtMYB61<---------------AGL15  <---------AHL20(1) ----->GT1--------->ANAC58 --------->RAP2.6(2)    <----------DOF2--------->At5g28300--------->HSFB2a(2)   aaacttaggtgcagggaatagtacgtaagcggcatttgggaggttggtgtttctttctttttttggctgtaaatggtaacatatttctagatgaattttg  2245400                                 <---------ZAT14                              --------->At4g35610                     --------->AHL20(2)                     <---------AHL20(2)                    --------->AHL20(2)                    <---------AHL20(2)                    <---------AHL20(1)                    --------->AHL20(1)                 --------->AHL20(2)                 <---------AHL20(2)                                                             -----                --------->AHL20(2)                                                  --------->CCA1(2)                <---------AHL20(2)       <----------DOF2                <------NtERF2 <----------ID1        <---------AHL20(2)   <---------MYB46(3)      --------->YAB1  --------->At4g35610    ---------   gctgtagtttttaatctattaatttatttagtggctgaactggctgtatcgactatattgatttttgaatgggctgcaattcgaagataagacaaaacag  2245500                                                          --------->YAB1              <---------AHL20(2)                          <---------ICU4          <---------YAB1                                 <---------YAB1        --------->YAB1                   --------->AHL20(1)       <----------DOF2    <---------YAB1      --------->ARR11(3)                 <---------AHL20(1) <---------YAB1  <---------AHL20(2) ---->At4g35610                   ----------->RAV1(1)  --------->YAB1      <---------YAB1 >MYB52(1)----------->GT1   --------->TOE2(3)         --------->ICU4      --------->AHL20(2)   atgaaaaaaatcatgttaaattcttgtttttcttaacaacatatatattaggcgaaattatcatgatacttttcatttttattttttaaaattgccagtc  2245600                                        <-----------GT1                                       <---------AHL20(2)                                       --------->AHL20(2)                                           <                                    --------->YAB1                                                  -                                    --------->ATHB51                                             <---                                    <---------ICU4                                              -----                  --------->YAB1    <--------HAHB4                                              -----          <---------MYB52(1)       --------->ICU4           ----------->GT1                   -------        ----------->GT1            --------->AHL20(2)      <---------TOE2(3)         --------->YAB1<-     <-----------GT1    --------->AHL20(2)      <----------DOF2          --------->YAB1<---------YAB1   gagtattaaaccgtttataaacataataaactattgaataattaatctttcttttgaaattagggataaattcaagtatagtttcagttataaatgtatt  2245700   <---------AHL20(2)  <---------YAB1 ---------ICU4      <---------YAB1 -------->YAB1      <---------TOE2(3) ------AHL20(2)    --------->YAB1                                                                   - ---->AHL20(2)     --------->AHL20(2)    --------->YAB1                                             - ---->ICU4      --------->TOE2(3)     --------->YAB1                       <---------------AGL15    - >TEIL ----------->GT1               --------->AHL20(2)      --------->DEAR3(2)<---------AHL20(2) --- --------YAB1 <-------TEIL   --------->KAN4(2)--------->MYB52(1)   --------->YAB1       <-----------GT1   tattattatttgtaaatacattaatattgaatattgccattaatcacaaaaccgaaatattgaaccgaagcatattgatattttaagtataaacccatcc  2245800  Previous    Next  AGI:  At5g07200.1    Description:  YAP169 (GIBBERELLIN 20 OXIDASE 3); gibberellin 20-oxidase. Identical to Gibberellin 20 oxidase 3 (20ox3) [Arabidopsis Thaliana] (GB:Q39112); similar to ATGA20OX4 (GIBBERELLIN 20-OXIDASE 4), gibberellin 20-oxidase [Arabidopsis thaliana] (TAIR:AT1G60980.1); similar to gibberellin 20-oxidase [Phaseolus vulgaris] (GB:AAC49756.1); similar to gibberellin 20-oxidase [Citrus sinensis x Poncirus trifoliata] (GB:CAB96202.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123); contains InterPro domain Isopenicillin N synthase; (InterPro:IPR002283) Range:  from: 2243554    to: 2245340    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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