Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               <------MYB46(1)                                                                                             <------MYB83                                                                                         <---------SPL7                                                                                       <------NtERF2                                                                                      ------>NtERF2                                                                                      --------->ABI4(1)                                                                                     --------->ANAC46                                                                                     --------->DEAR3(1)                                                                                     --------->RAP2.3(2)                                                                                     --------->RAP2.3(3)                                                                                     --------->RRTF1(3)                                                                                    --------->ORA47(2)                                                                                    --------->RRTF1(1)                                                                                    --------->DEAR4(2)                                                                                    --------->ERF1                                                                                    --------->RAP2.3(1)                                                                                    --------->RAP2.6(1)                                                                                    --------->ATERF1(1)                                                                                    <------NtERF2                                                                                   ------>NtERF2                                                                                   <---------ATERF1(1)                  <---------YAB1                                                   <---------RRTF1(1)                 --------->ARR11(3)                                                <---------RAP2.3(1)                --------->GLK1(1)                                                 <---------ETT(2)                <---------GLK1(1)                                                 <---------DEAR3(1)         <---------HSFB2a(2)                                                    <-----------HVH21         <---------LBD16                         --------->SPL7          ----------->HVH21  <--------        ------>ZmHOX2a(2)                     --------->ANAC46         --------->ZAT2<---------DEAR3(1)      --------->ARR11(3)---------->DOF2      --------->LBD16           --------->At4g35610 <---------MYB55(1) -->At4g35610  <---------ARR11(3)          <---------LBD16             <---------At4g35610<---------MYB52(1) ---->RAV1(2)  --------->ARR11(3)      ----------->ARR10<---------DEAR3(1)     <-----------RAV1(1)   gagccattgatctcggagatatcatcgaaagggctgaagataacatccgcgtaagacggaggctcgaggtaagagctgactctgtcgccgccgtttggtt  2209100                                                                                      --------->TGA1a                                              --------->ALFIN1                        <---------O2                                           --------->DAG2                             --------->O2                      --------->ZAT14     ---------->DOF2                             <---------ANAC46                      <---------ZAT14  <------NtERF2                                  <---------TGA1a                 <-------TEIL        <---------ANAC46      <---------At4g35610     ----------->TGA1                --------->ARR14(1)   ----------->GT1       --------->ZAT2          ----------->HVH21                --------->CCA1(2)   --------->RAP2.3(1)    ----------->RAV1(2)     --------->ALFIN1               <---------GLK1(2)    <------NtERF2          --------->At4g35610    <-----------HVH21               --------->ARR11(1)  <---------ATERF1(1)     <---------ZAT2       <---------MYB46(3)               <---------ARR14(2)  ------>NtERF2 <---------ARR14(2)           <---------LBD16               --------->ARR14(2) <---------DEAR3(1)     <-----------RAV1(2)----------->HVH21      <------ZmHOX2a(1)           --------->ALFIN1 ------>ZmHOX2a(2) --------->ANAC58 <---------bZIP60(1) -AtMYB61   --------->LBD16    <---------DEAR3(1)--------->ARR14(2)  --------->ANAC58 --------->bZIP60(1)   tagaacgaggactccgagattcgctgtagtaagacggtggcgcaaaaagtggatcggaatcagctggagttacgacaatcgacgggtgacgcgagtcgaa  2209200                                                                                 <------NtERF2                                                            <---------WRKY12    --------->LBD16                           --------------------->WRI1      --------->WRKY18(1)<---------LBD16                          <---------ZAT6             <----------DOF2          <---------HSFB2a(2)                    <---------ICU4                  <---------ANAC58--------->ANAC58                   <---------ATHB51                 <---------ANAC58--------->ANAC58                   <---------YAB1           --------->WRKY12<---------WRKY38(1)<---------ANAC46                   --------->ICU4           --------->WRKY38(1)     ------>ZmHOX2a(2)               ------>NtERF2                ----------->HVH21     <---------ARR14(2)         <-------            <---------At4g35610            <---------MYB52(1)     --------->ARR14(2)---------->DOF2   ----------->HVH21<--------HAHB4        <-------GAMYB   <-----------HVH21   --------->HSFB2a(2) <--   gagagttgacatagcgctgcgataattagagttggatttatcgccgttgacattgcttttggtcaagggatcgccatcttcgcggagaaagagtttctcc  2209300                                                                                          --------->AHL20(2)                                                                                          --------->AHL20(1)                                                                                          <---------AHL20(2)                                                                             <---------------AGL15                                                                             --------------->AGL15                                                                            <-----------------AGL3                                                                            ----------------->AGL3             <---------ANAC46                                              --------->At4g35610     <----------DOF2       <---------HSFB2a(1)           ----------->GT1   <---------At4g35610      < ----GT1    --------->ATHB12                      <---------ICU4     --------->DAG2       <---------AHL20(1) -------CCA1(2)--------->ALFIN1 <-----------TGA1 <---------ATHB12    <---------TOE2(3) --------->YAB1   atctcttctttggatgagtggagatgggactcttcgtcattctctgagcccatcatctctggtaaatctataaggtgagctaattttagtaataaattca  2209400                                                               <---------At4g35610                  -                                                               --------->At4g35610            <------                                                       <---------MYB46(3)                     <------                                                 --------->ARR14(1)                           -------                                                 --------->CCA1(2)                            -------                                                --------->ARR11(1)                 --------->ALFIN1<-                                           <---------TOE1(1) --------->ZAT14     --------->ALFIN1<---                                           <---------ANAC46  <---------ZAT14 <---------LBD16 <-------                                   ------->GAMYB--------->ARR14(2)           --------->At4g35610<----                                --------->MYB52(1)    <---------AtMYB61--------->AHL20(2)    <-------                           --------->HSFB2a(2)  <---------ARR14(2)    <---------ATHB12      ---------              <-----------GT1   <---------DOF5.7(2)   --------->ALFIN1--------->AHL20(2)   ---------- ------ZmHOX2a(1)          <---------HSFB2a(2) <------ZmHOX2a(1)      --------->ICU4      <----------   caggaatttagggatttttcgattcggttcgagataacggagattacgaggatacggtggtcgtgaactgcaataaataagcggagtggctaagtcacgg  2209500                                                                                                <----                                                                                                -----                                                                                              -------                                                                                             -------- -------->ALFIN1                                                                             -------- ---TGA1a                                                                                   --------- ---O2                                                                                      <-------- -->TGA1a                                                                                   --------- -->O2                                                                                      --------- -----NtERF2                 <-----------HVH21             <---------At4g35610       <---------ANAC46 ------DEAR3(1)             <---------ANAC58         <---------LBD16                 <---------ANAC58 --At5g28300--------->ARR14(2)                    <------------CBF                <----------DOF2 -----ABI4(1)    *TSS       <---------ANAC58    <---------------AGL15          <---------AHL20(1) --LBD16    <---------ARR11(3)                  --------------->AGL15          <---------ARR11(3) >MYB52(1)  <---------ARR14(2)                <-----------------AG       ----------->GT1<-----------HVH21 ->HVH21    --------->ARR11(3)          ------------>CBF   --------->At4g35610 --------->ARR11(3) -HVH21   --------->LBD16   <---------ANAC46<---------ATHB12         ---------->DOF2 <---------ANAC58   cggtgttggctccagatattgaatgtagtagcgtcaagtctcgtcaataactaattggggaagatgagatggaaagagtaatatctttcgggtcacgtta  2209600      <---------ZAT2          --------->ATERF1(1)      --------->ZAT2         --------->At4g35610      <---------At4g35610    <---------At4g35610                                     <---------ARR11(3) -----DOF5.7(2)              --------->ZAT2                                          --------->ARR11(3) ----->DOF2               --------->LBD16                                           --------->RVE1(1) -->DOF5.7(2)       ----------->HVH21                                               <---------GLK1(1) ->TOE2(3)          <---------ETT(1)                                                <---------RVE1(1) ->TOE1(3)         --------->MYB46(3)                         <---------YAB1        --------->GLK1(1) >O2  --------->At4g35610--------->ANAC46      --------->ARR14(2)<---------YAB1    --------->ARR11(3) -ANAC55(2)        --------->DEAR3(2)<---------ZAT2        <---------YAB1          <---------ARR11(3) >ANAC58        <-----------GT1      --------->ZAT2     --------->AHL20(2)       <---------ZAT6 >ANAC58       ----------->HVH21--------->At4g35610     <---------ATHB51   --------->ALFIN1   aagtgtttagctgggttttgacccgacccgtagcagcccagcccagcccaatatgcaaattattcttatacttaaatgtggtagagatatctctgcatcc  2209700                                                  <---------WRKY12                                                  --------->ZAT18  <---------GLK1(1)                                                  <---------WRKY38(1)           <---------LBD16                                           --------->ARR14(2)      --------->GLK1(1)                                    ----------->HVH21             --------->ARR11(3)                                    --------->ANAC46              <---------ARR11(3)    --------->ANAC58                                    --------->ANAC58        --------->YAB1   ------->TEIL          --                                    --------->MYB46(3)   ----------->GT1--------->At4g35610       <--                                    --------->ANAC58 --------->MYB46(3) <---------At4g35610     <----    <---------MYB59        <----------DOF2 <---------ARR14(2)   <---------TOE2(3)       --------->ANAC58   aaacgacctgactataggtctacttggttctttcttccacgaccgtatcgagtcaactactgtaataagatttccgatgaactcagggactcgaaattgg  2209800      <---------ARR14(2)      --------->ARR14(2)      <-----------HVH21    --------->LBD16  <---------LBD16 --------->MYB52(1) --------->HVH21                         <-----------GT1 -----GAMYB--------->ANAC46           --------->YAB1                    --------->YAB1 -----TOE2(3)            <---------MYB52(2) <---------DAG2      <---------LBD16                  <<<<   ggttaccgggtccgagccatttgggaaactatcgattctatcttcaccttatgctcttctgtattcttcggaaatgagaatgtagtagtctcatggagtt  2209900                                                             <---------LBD16                                                            --------->CCA1(2)                                                           --------->ARR11(1)                                                          --------->YAB1                                                         <---------YAB1                                                       <---------ICU4               ---------->DOF2                         --------->YAB1              <xxxxxxxxxxxxxxxxsmallRNA(i)            --------->ICU4            --------->TOE1(3)                         <---------YAB1          --------->GLK1(2)                         --------->ATHB12     <---------ANAC58                              --------->ICU4                 --------->At4g35610     <---------ANAC58                              <---------YAB1                 <---------At4g35610     <---------ANAC46                          --------->ANAC58               <-----------HVH21 <---- <<<<<<<<<<<<<LFY                              --------->ANAC58           <----------DOF2    --------   tccaatggcgagaagcttaaagctctgttttctattggagaagagcaaaacgcatgattatgatacggagacacttctttcgtcatatgagagaagagta  2210000  Previous    Next  AGI:  At5g07120.1    Description:  phox (PX) domain-containing protein. similar to phox (PX) domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G58440.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21370.1); contains InterPro domain Phox-like; (InterPro:IPR001683); contains InterPro domain Vps5 C terminal like (InterPro:IPR015404) Range:  from: 2206895    to: 2209517    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version