Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             <---------ICU4                                                                           --------->ATHB12                                                                           --------->YAB1                                                                      <---------GLK1(2)                                                                    <---------TOE2(3)               <                                                                    <---------TOE1(3)              <-                                         --------->ZAT14            <---------YAB1            -------                                         <---------ZAT18        --------->TOE1(3)             <------                                         --------->ZAT18        --------->TOE2(3)             <------                                   --------->At4g35610       --------->GLK1(1)            ---------->DOF2                                 --------->YAB1             --------->ARR14(2)        ----------->RAV1(1)                                <---------ATHB12            <---------ARR14(2)      --------->MYB46(3)                              --------->WOX13(1)  ----------------->AGL2  <---------YAB1--------->MYB46(3)                        ------>NtERF2    <---------ZAT14   --------->At4g35610 <-----------HVH21 <---   aagttgtatgtagaagaccatcttgccgcttgcaatcagcaagcgcacttaaaccaaaatcagataccttaagattatcattgtcatccaacaaaagatt  2197700                              <------NtERF2                              --------->ZAT2                              <---------At4g35610             <------NtERF2    --------->At4g35610          --------->At4g35610        <-----------RAV1(1)   <---------ZAT2     --------->ZAT18    <----------DOF2         <---------DEAR3(1)   <---------ZAT18                          <----------DOF2 --------->LBD16           <---------LBD16      ------->GAMYB ----------->GT1       <---------ARR11(3) ------>NtERF2             ------>NtERF2        --------->RAP2.6(2)                --------->REM1(1) ---------RAP2.6(2)      <---------LBD16       --------->MYB46(3)                ----------->RAV1(1) --------LBD16 --------->At5g28300----------->HVH21   --------->YAB1          --------->AtLEC2 -->ARR11(3) <---------ANAC46------>NtERF2   <-----------GT1 ----------->GT1  --------->ANAC58 ---ARR11(3) <---------DEAR3(1)<---------DEAR3(1)--------->ZAT14              --------->ANAC46 ---GLK1(2)<---------ANAC46<---------At4g35610-------->P   <---------At4g35610--------->ANAC58<------ --------GT1<---------LBD16--------->LBD16   --------->MYB52(1)   --------->AHL20(2)--------->ARR11(3)   ttccggcttaatgtcgcggtgataaactccgcggctgtgacaaaaatcaaccgcactaataagctgataaaaatacttccaagcaacatcttctttaagt  2197800                                                                                              -------                                <----------DOF2                                             ---------                               <---------DAG2                  <---------WRKY18(1)     <-----------GT1                           --------->MYB46(3)               --------->TOE2(3)<---------ARR14(2)                      --------->At4g35610           ----------->GT1          --------->ARR14(2)------  <----------DOF2  ---------->DOF2                ---------->DOF2 <----------DOF2 --------->TOE2(1) ---TOE2(3)--------->TOE2(3)<---------ALFIN1   --------->YAB1  >>>>>>>>>WRKY18    --------->TOE1(1)   tttccttttgcaaccttgttgaaaagctcaccacctttacaatactcaataacaaagtaaatccttgactttgtagccataacctcgtataactcaacga  2197900                               ------>ZmHOX2a(2)                              <---------GLK1(1)                              <------ZmHOX2a(2)                              --------->GLK1(1)                             <---------ARR11(3)                             --------->ARR11(3)                            --------->GLK1(1)                            <---------GLK1(1)                   <---------ICU4                                                 --------->WOX13(1)                  ------>ZmHOX2a(1)           <---------ANAC58               ------>ZmHOX2a(1)                  ====================HOX2a_HOX2a   ---------->CDC5         <---------ANAC58                  ===================HOX2a_HOX2a------>NtERF2               <---------ANAC58                  <---------YAB1              <---------ANAC58        <----------DOF2--------->YAB1<- -->ANAC46     <------ZmHOX2a(2)             --------->At4g35610  <---------CCA1(2) <---------ATHB12 >MYB52(1)    <---------ARR14(2)        --------->ATHB12        --------->YAB1 <-----------HVH21  --- ->GAMYB      --------->ARR14(2)      <----------DOF2     <---------ALFIN1---------->ID1  <---------YAB1   cattcgggtgtttagcgatcctcattacagagatctctcgcttgatttgctggctaagcccgactctcataactttgtccttgtcaatcatcttgatagc  2198000              --------->ATHB12              --------->YAB1             --------->ICU4         <------MYB83                                                        --------->ARR11(3)         <------MYB46(1)                             <---------WRKY18(1)     <---------ARR11(3)        <---------TOE1(2)                           --------->WRKY38(1)      <---------ARR11(1)        <---------TOE2(2) --------->HSFB2a(2)   ------->TEIL      ------>MYB83  <----------DOF2 --------ALFIN1        ------>ZmHOX2a(1)   ---------->DOF2        ------>MYB46(1) ------>ZAT14<---------YAB1         <----------DOF2 --------->WRKY12        <---------CCA1(2)   tacactctcgttggtatgattactccttccaaaatacactttagcaaaagtaccttgacccaataacctcccaacttcatatctttcagttaatacactt  2198100                                                                                    <---------ATHB12                                                                                --------------->AGL15                                                                                <---------------AGL15                                                                               ----------------->AGL1                  --------->ARR11(3)                                           ----------------->AGL2                  <---------ARR11(3)                                           ----------------->AG               *TSS                                                            ----------------->AGL3             ------>ZmHOX2a(1)                                          <-------GAMYB       <------MYB46(1)            --------->TOE2(3)               ---------->DOF2            <---------MYB46(3)   <------MYB83            --------->TOE1(3)            --------->TOE2(3)             --------->MYB52(2)  --------->MYB46(2) <---------MYB46(3)                      --------->TOE1(3)           <---------MYB52(1)    --------->MYB59   ggtttgttctccatccttaaaatctacaaacttcaaactactacctcaaagcatttgagtttttaaacccagtttgttgattccaaatcaagttaggtta  2198200                                                             ----------->RAV1(1)                                                           ------>MYB83                                                           ------>MYB46(1)                     ------                                                          ----------->RAV1(1)        ----------->RAV1(2)                            <------ZmHOX2a(2)            --------->AtMYB61       <---------ARR11(3)               --------->DAG2                   <---------DAG2      --------->MYB52(1) ------>ZmHOX2a(1)              ---------->DOF2   <------ZmHOX2a(1)<----------DOF2 --------->ANAC46--------->ARR11(3)          --------->YAB1  <------ZmHOX2a(1)  <-----------GT1--------->MYB46(3)  <---------GLK1(1)   actactactgaatcaaaaaagcacaataggatcaggactcagaagtctaaccttttagaccaacaacacaaaaccgatttcgatatctcctgtaacaaaa  2198300                                    ---------->DOF2                                               ---                              ---------->DOF2                                                    ----      --------->ANAC58     --------------->AGL15                        <---------YAB1       <-------      --------->ANAC58  --------->AtMYB61           <-----------HVH21 --------->YAB1         ------->TEIL ---->DOF2             --------->MYB46(3)   >>>>>>>>>TBF1 --------->ZAT14                    --------   agattgagaagcaagacgaagagaaaccactcgaaagagaaaggaagaagaaacagtcacttctctcttgtatgatgaaaccgaattgagggatgaatcc  2198400                                <------MYB83                      ------>ZmHOX2a(2)                     <---------GLK1(1)                     <------ZmHOX2a(2)                     --------->GLK1(1)                    --------->ARR11(3)                    <---------AGP1  <---------WRKY18(1)                    --------->ARR14(2)     <---------ZAT18                    <---------ARR14(2)     --------->ZAT18                    <---------ARR11(3)     <---------ZAT14                    <-----------ARR10      --------->ZAT14               --------->MYB52(1)  --------->WRKY38(1)     ---------->DOF2------->TEIL<---------MYB46(3)    XXXXXXXXXXXXXXXXXXX>MIR156A-F<-------GAMYB    XXXXXXXXXXXXXXXXXXX>MIR156G <------MYB46(1)                                      <---------AHL20(2) ------->DOF2 <---------SPL7 <---------MYB52(1)             ------>ZmHOX2a(1)    <---------AHL20(2) ----->LBD16 <---------MYB52(2)--------->MYB59     --------->ARR14(2)            --------->AHL20(2) --ARR14(2)  --------->MYB46(3)<---------AtMYB61   <---------ARR14(2)    <----------DOF2 ->ARR14(2) <---------------AtSPL3<---------WOX13(1)   <---------At4g35610   <---------AHL20(2)<-----   gaaagacaaaagagaacgaacggatctctctgtttggttgactagtggactcagttctgctcctctgtctaaattctttttatttatatttttggatttt  2198500                                                                                                    <                                                  <---------ANAC58                                  -                       --------->GLK1(2)--------->AHL20(2)                                       <---                       --------->ARR11(3)         <---------ANAC46                               <---                 <---------TOE2(3)      <---------AHL20(2)                                       <---               --------->MYB52(1)   <----------DOF2--------->LBD16                          <--------         ----------->GT1       --------->GLK1(1)  <---------AtLEC2                          <--------       ---------->DOF2 <---------ARR11(3)         <---------ANAC55(1)            ==================== ----AHL20(2)  ---------->DOF2 <---------GLK1(1)  <---------ANAC58               <-----------RAV1(2)-   atgttttaaaaaagaaataaaggaaaatctaagagttcctttttaaatagttgcgtggaagtgaatagacattagagagagtcgcagagggtatttgttg  2198600  Previous    Next  AGI:  At5g07070.1    Description:  CIPK2 (CBL-INTERACTING PROTEIN KINASE 2); kinase. similar to CIPK10 (CBL-INTERACTING PROTEIN KINASE 10), kinase [Arabidopsis thaliana] (TAIR:AT5G58380.1); similar to CBL-interacting protein kinase 2 [Populus trichocarpa] (GB:ABJ91210.1); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 2196435    to: 2198115    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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