Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            ----------->GT1              --------->TOE2(3)      --------->At4g35610               <---------ANAC58          --------->AHL20(2)      <---------At4g35610               <---------ANAC46     ----------->GT1                 <------- ---->TEIL                       <------ZmHOX2a(2)         ---------->DOF2<-----------GT1   <-------- ----->GT1                    ------>ZmHOX2a(2)         --------->HSFB2a(2)      <----------DOF2   -- ----ANAC46               <---------YAB1<---------ANAC58<---------HSFB2a(2) --------->ZAT6  <--------   tatatttcagccccatgtagtagaagttttgatcgatcactggcctgtaaatttgtttatagaaagaaaaaaatgttaactctctttctaatttgctttt  2193000                                         ------->GAMYB                                      ------->GAMYB                                           <------                                     <---------MYB111(1)                                     --------      --------->ANAC58               --------->MYB46(3)                                      --------      --------->ANAC58             <-----------GT1                                ----------->GT1 ---DOF2                        ----------->GT1                    <---------ANAC46          <------- -ANAC58                        --------->ANAC55(2)                <---------ANAC58        <---------RAP2.6(2) -------->DOF2          ----------->GT1-------->P                  <---------AtLEC2 <---------MYB52(1) -ANAC58  ----------->GT1       <---------ANAC55(2) <------NtERF2  <---------ANAC58--------->TOE2(3)   gcaaagacaaggtagtcaaatagagacagtgattaagtaacaacccaagaaggccgagaatgaatagttgcatgaaaatggagaacgttattttcggctg  2193100                     --------->ANAC55(2)                     --------->ANAC46                  <---------ARR14(2)                  --------->ARR14(2)                 <----------TaMYB80                 --------->KAN4(1)                                                          <--------                ---------->TaMYB80                                                         --------->AHL20(2)                <---------KAN4(2)                                                          <---------AHL20(2)             ----------->GT1                                    <---------AHL20(2)      <---------ICU4     ------>ZmHOX2a(1)                                         <---------AHL20(2)      <---------AHL20(2)     ----------->GT1<-------TEIL                          <---------ANAC46             <---------ATHB51 ----CDC5 --------->MYB52(1)                       <---------YAB1                      --------->ICU4 --->RAV1(2)--------->ANAC46              --------->GLK1(2)    --------->AHL20(2)      --------->AHL20(2) ->At4g35610--------->ANAC58          --------->YAB1--------->ATHB12              --------->YAB1   -- --At4g35610--------->ANAC58   --------->GLK1(2)   <---------ATHB51              ----------->GT1-----   agccttcctgtaaaacggaatatacgtagttagaatccattaacaatctatcgattattggcgaataaaattcaaagaatgtaatgaaaataattaaatg  2193200                                                   <---------AtLEC2                                                   <---------ANAC58                                           ------>NtERF2                                          --------->ALFIN1                                         --------->ATERF1(1)                                         <------NtERF2                                         <-------GAMYB                                        <---------MYB46(3)            <------ZmHOX2a(1)                                        <---------ATERF1(1)         --------->ANAC58                                        <---------DEAR4(2)     --------->ANAC46                                        <---------DEAR3(2)     <----------ID1                                       --------->ALFIN1     <---------ETT(2)                                       <---------DREB2C(2)<------NtERF2                                       <---------DEAR3(1) <-------GAMYB                             <     <---------DAG2   ---------->DOF2 <---------ABI4(1) <---------RAP2.6(2)                         <  <-----------GT1  --------->ANAC58  ------->GAMYB <---------ANAC58 --------->ANAC58               -- -AHL20(2)         --------->ANAC58<---------At5g28300  <---------ANAC46                  --------->ALFIN1 ------->CCA1(2) ---------->DOF2  --------->MYB52(1)   --------->RAP2.6(3)           --------->MYB52(1) ------>GT1   >>>>>>>>>TBF1  --------->ZAT18<------NtERF2<---------MYB46(3)     <---------ANAC46   <-   gatataacctttcgaagaagaaagcaaagggtgcaataacggcggtggcaattgcatggcggtagacgacaaggacatagtggctcataccggtgttgag  2193300                            <------NtERF2                            --------->ATERF1(1)                           <---------SPL7                          <---------ANAC58                          <---------ANAC58                        ------>NtERF2                        --------->LBD16                       <---------ATERF1(2)                       <---------RAP2.3(3)             <---------AHL20(1)             --------->AHL20(1)             <---------AHL20(2)            <---------AHL20(2)            --------->YAB1<---------ANAC46            --------->AHL20(2)           --------->ICU4<------NtERF2      ----------->GT1  <---------RAP2.6(2)     <---------YAB1     --------->MYB59   <---------DEAR3(1)     --------->ARR11(3)                     ----------->HVH21 ---------CCA1(1)      --------->ATERF1(2)   --------->GLK1(1)                ---------->DOF2 ---------RVE1(1)     <---------LBD16        <---------GLK1(1)        <---------ANAC58 ------->ARR11(3)     --------->RAP2.6(3)   --------->ARR11(3)        <---------ANAC58    <---------At4g35610 --------ARR11(3)<-------TEIL               <---------ARR11(3)      --------->ARR11(3)    <---------ZAT2   ggatattttggtaattatattcatgccggcgtagccaaactggagagatatcatggcgaagtagggtttagagcttgtgagaaagctctcacagctacta  2193400                                                                                               ------                                                                                <-------TEIL --------                                                                   <-----------TBP          <--------                                                                 <---------------AGL15    --------->YAB1                                                            <----------DOF2  --------->At4g35610        <---------ETT(2)                             ------>ZmHOX2a(2)  --------->YAB1   --------->ICU4   ------>ZmHOX2a(1)      <---------REM1(1)    <------------CBF  --------------->AGL15 ------->TEIL   atctcctccatcgacataatgttttaagttgtagttgtttgagtaaaactattgatcgtggtcttttgtatttatagtaagatgcaacgtatttatgata  2193500                                    --------->bZIP60(1)                               <-------GAMYB                               <---------ANAC58                           <---------ANAC46                           <---------ANAC58                           <---------ANAC58                     --------->MYB59<---------bZIP60(1)          <------------CBF             -------                     <---------TOE1(3)                     --------->ZAT14                  ---------                     <---------TOE2(3)     <---------ARR11(3)--------->YAB1                 <-------- --->CCA1(2)    --------->ICU4<---------MYB46(3)    ------>MYB46(1)            --------->ARR11(3) ->YAB1        <---------TOE2(3)<---------WOX13(1)  ------>MYB83--------->ATHB12<-----------GT1 ----- -YAB1       <---------AHL20(2)<---------ANAC58<-----------GT1 <---------YAB1  --------->AHL20(1)   tggttttgtatttgtttaatgtttaggtttcttggttgacatcactatcttacctcccctctatagtcattggaactcaaatatactggtcgaattatat  2193600        <---------ANAC58        <---------ANAC58       --------->MYB59       <---------------AtSPL8    <------------CBF                      <------------CBF ------------>CBF                       <---------AHL20(2) ---->TBP                             <---------YAB1 >AHL20(2)                         <---------ATHB51                                          -------- -AHL20(2)                <---------MYB52(1)                        --------->ARR14(2)--------->AtLEC2 ------>TBP    ----------->HVH21   --------->ICU4        ----------->GT1              --------->ANAC46   aaaaccaattgggtactatgacacttccattaggcaaattatgaaattgtggaacaaatttgtaaatctctatccgtcttggtaatccatggaacgggtt  2193700                                                                           --------->AHL20(2)                                            --------->ANAC55(2)            <---------AHL20(2)                                           --------------->AtSPL3          --------->AHL20(1)                                           <-------TEIL                    <---------AHL20(1)                                           ------->TEIL                   --------->AHL20(2)                                           --------------->AtSPL8     <---------ARR11(3)                                       <---------------AtSPL8        <------MYB46(1)                              ------>ZmHOX2a(2)                      ----------->GT1       --------->MYB46(3)   <---------ARR11(3)                       <------MYB83 --->GT1  ---------->DOF2   --------->ARR11(3)        <-------TEIL<------ZmHOX2a(1)   aacaggctaaccaaaagatgagttagggatgatctatcgctaatgtacgtactaaattcgtccatataggaaggtattaaattgctaatcttcgaaatat  2193800                                                                                       ------->TEIL                                                                                      <---------ALFIN1                                                   --------->ANAC46                 --------->ANAC58                                       --------->AHL20(2)                           --------->ANAC46                                       <---------AHL20(2)                           --------->ANAC58                                      --------->AHL20(2)                   <---------ICU4                                      <---------AHL20(2)           >>>>>>>ZML2--------->YAB1                  --------->ANAC58    --------->YAB1       --------->DEAR3(1)<---------YAB1                  --------->ANAC58--------->AHL20(2)     ------->GAMYB     --------->YAB1        ----------->HVH21         <---------AHL20(2) <---------ALFIN1     <---------ATHB12       <---      --------->ANAC55(2)   <---------LBD16       --------->MYB46(3)      --------->ICU4    <--------   atgtttttatgtgacacaactcgcatcaattcgggattaattaaaatttcgacccacaacgcagacgttctagccaataatcatagacgcacttgtgatt  2193900  Previous    Next  AGI:  At5g07050.1    Description:  nodulin MtN21 family protein. similar to nodulin MtN21 family protein [Arabidopsis thaliana] (TAIR:AT2G40900.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64894.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) Range:  from: 2191386    to: 2193417    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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