Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              --------->ZAT2                                                                            --------->At4g35610                                                                <---------At4g35610                        --------->ANAC58                        --------->At4g35610                        --------->ANAC58                      <-----------RAV1(2)                   <----------DOF2                          ----------->RAV1(1)       ---------->DOF2  --------->ANAC46<---------GLK1(1) --------->ZAT18   <---------At4g35610------ ->HVH21        <---------ARR11(3)      --------->GLK1(1) <---------ZAT18   <---------ZAT2     ======   ggttactgctaaagtcaataactttcaaggaactaaactcagaaatctgatcagggattgtgccccagatgagattagagctgagattaagagtctctaa  2150400                         <---------ARR14(2)                     --------->ALFIN1                   <---------O2                   <---------TGA1a                 --------->ZAT14                 <---------ZAT14--------->ATHB12                =============MYC_MYB                                          <-----------HVH21              --------->At4g35610                                            <------MYB83     --------->MYB52(1)  --------->ARR14(2)                            --------->MYB52(1)  --------->ZAT6------->GAMYB  <---------YAB1                      --------->MYB59        <---------- ---->DOF2    <---------At4g35610 <---------WOX13(1)    <---------WRKY12     <------MYB46(1) ============================bZIP_DOF                  --------->WRKY18(1)   ----------->GT1   agtaacacaacgagacaactgaagtgggataggctgattgaagaagttcaaggagaggtcaaggtgagtgaggtaagggaggtcacaaatggagtcagag  2150500                                                      --------->At4g35610                                                      --------->GLK1(1)                                        --------->ANAC55(2)                                        <---------ANAC55(2)                                        --------->ANAC58                                        --------->ANAC58                        <---------TOE2(3)           <------ZmHOX2a(1)                     <---------ANAC46             <-------TEIL               <---------ANAC46                       ----------->GT1            --------->CCA1(2)           ----------->GT1                      --------->ZAT14 <-----------GT1   <----------DOF2     <-----------------------TaNAC69(2)    <---------ZAT18 -HVH21---------->DOF2  <---------TOE1(3)  ---------->DOF2                   <---------ZAT14     >>>>   atttcaccagaaagattcaaactttgaaggttaatggaagagacgtaaagagtaggagctctagtacatgtgataccagtccagttacaatggtgcgaag  2150600               --------->TOE1(3)               --------->TOE2(3)              ----------->RAV1(2)             ------>MYB83             -------->P             ------>MYB46(1)           --------->AtMYB61            ---------->DOF2                                  ---------->DOF2         >>>>>>>>>>MYB80              <---------YAB1                                   ----------->HVH21        <-----------GT1    <---------DAG2                                    ------>ZmHOX2a(1)    ---   ----------->GT1         <----------DOF2                               <---------ARR14(2)       <--   <---------ZAT6 ---------->DOF2  <------ZmHOX2a(2)  ------->TEIL       --------->ARR14(2)       --- >>>>>TBF1--------->MYB46(3)<----------DOF2      <----------DOF2         <---------ARR11(3)       <--   aagaagtgttaaaccaacctgaaagagagccttttggatcatcaaaggaggctttgaatctgagaaggttaccaagttcctcgttctctgtgaaagagaa  2150700                                                                                                    -                                                                                                   --                                                                                                   <-                                                                                                   <-                                                              <--------P                          <--                                                             <---------MYB52(1)                   <--                                                        ------->TEIL                              <--                                                        <---------ARR14(2)                        ---             >>>>>>>>>TBF1                              --------->ARR14(2)                        <--          >>>>>>>>>TBF1                            <---------ANAC58                               --- ------>ARR11(3)                                   <---------ANAC46                               --- -------ARR11(3)                                   <---------ANAC58                               --- ------>ARR14(3)      <-----------HVH21           <---------MYB46(3)           <---------TOE2(3)  <-- -------ARR14(3)>>>>>>>>>TBF1                 <-----------RAV1(1)     --------->YAB1             <---   ggtcttggtgaagaagaagaagaatgtcaaggctagtgagattgaaaactggtgcttgaatctggtagccattaatgagttaagaatagagaatgaagag  2150800             --------->ZAT18             <---------ZAT14         --------->ATHB12  --------->At4g35610  <---------At4g35610 ----->ZmHOX2a(2) ------->GLK1(1) -----ZmHOX2a(2) --------GLK1(1)                                                                                  --- -------ARR14(3)                                                                            <------MYB83 -------ARR11(3)                                                                        --------->ALFIN1 -------ARR14(2)                                                                        <---------ANAC46 ------>ARR14(2)                                                                    <---------LBD16 -------AGP1 --------->ZAT14                                                      <---------ARR14(2) ------>ARR14(3)                                                                  --------->ARR14(2) ------>GLK1(2)                                                           --------->ALFIN1--------->ALFIN1 ------>ARR11(3)                                                        <---------At4g35610<---------MYB46(3) ---------ARR10                                                       <-----------RAV1(2) <--------P< ---ZmHOX2a(1)      <---------ZAT6                           <------------CBF----------->GT1<------MYB46(1)   gatctgctgaatgagtgaagtagtgagagagtgagagtgagagtgagagtgagagtgagagtgaattgaatttcaggtgttgaaaatacggggtgggttt  2150900                           --------->YAB1                           ----------->GT1                    <------MYB46(1)                    ----------->GT1                    <------MYB83   --------->YAB1   <---------MYB46(3)     <---------ZAT14  --------->ICU4   <---------AtMYB61       --------->ARR14(2)  <---------ATHB51<--------P               <---------ARR14(2)               <---------AtMYB61      -- --------->CBF   <-------GAMYB   --------->YAB1                     <---------MYB52(1)         <----- ---------------AGL15<-------GAMYB  ---------->DOF2               ----------->GT1              ------   tgcaattataagatagtagggttggttaatggtaaaaataaagagtatagggtttagtttgaaatttcccgttaaattttggtcgagggtctatggggaa  2151000                         --------->HSFB2a(2)                         <---------LBD16                     <---------O2                 <---------CCA1(2)          <---------ETT(2)<---------ANAC46    ------>ZmHOX2a(2)          --------->ETT(2)*TSS                <---------ANAC58    <---------ARR14(2)   <---------HSFB2a(2)  <---------ANAC58                                    <-- ==============================MYC_MYB       <------ZmHOX2a(2)                                    <-- <--------P          --------->O2           <---------ARR14(2)                           --------->ANAC58 --------->GT1       <---------TGA1a        --------->ARR14(2)          --------->WOX13(1)    <------ ----ARR14(2)        --------->TGA1a    <---------LBD16              <-----------GT1     --------->ANAC58 --->ARR14(2)   --------->MYB52(1)   <---------GLK1(1)          <----------DOF2       <---------ATHB12   ctggtagatttgtagacaaaacgacgtctcggagattggaatttcggatcgtgtctctctctgtttctttgtttcaatccgatttcgaatcaagcccttt  2151100                             <-----------HVH21       <----------DOF2                            --------->bZIP60(2)     <---------DAG2     ------->TEIL           --------->ANAC46        --------->TOE2(3)   <---------ZAT14         --------->LBD16        ------>MYB46(1)   <---------ZAT18     <-----------GT1            ------>MYB83                           <---------HSFB2a(2)   --------->ZAT18<---------ANAC58           --------->ANAC58                            --------->HSFB2a(2) -------ANAC58    <---------ANAC58           --------->ANAC58                   ---------->ID1 -------ANAC58--------->ARR11(3)             --------->ANAC46               <----------DOF2 ----DOF2     <---------ARR11(3)--------->MYB52(2)-------->P         <-----------GT1    <---------LBD16   acttgtgcaccttcaagatttcgtttttccaggtcagtttcttcatcaagccaacctttttttctagggtttttcttcctttgttttttttctgggagtt  2151200                                                                                            <--------                                                   ----------->GT1                          <--------                   --------->HSFC1(2)        <----------DOF2                 --------->TOE2(3)                   <---------HSFC1(2)       <---------ANAC58                 --------->TOE1(3)             ------>ZmHOX2a(1)              <---------ANAC58        <----------DOF2       <---------At4g35610   ------>ZmHOX2a(1)                  <----------DOF2           --------->WRKY12---------->DOF2   ttctccttcacagtcctaagaagctacttgttaactctgtctttttgcttttgaagttaaacctagttgactttctcaagcttaaagagttcagcttttt  2151300  Previous    Next  AGI:  At5g06940.1    Description:  leucine-rich repeat family protein. similar to HSL1 (HAESA-LIKE 1), ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT1G28440.1); similar to H0305E08.2 [Oryza sativa (indica cultivar-group)] (GB:CAH67431.1); similar to Protein kinase [Medicago truncatula] (GB:ABN08138.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23535.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IP Range:  from: 2148079    to: 2150772    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g06950.1    Description:  AHBP-1B (bZIP transcription factor HBP-1b homolog); DNA binding / transcription factor/ transcription repressor. Identical to Transcription factor TGA2 (TGA2) [Arabidopsis Thaliana] (GB:P43273); similar to TGA6 (TGA1a-related gene 6), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G12250.2); similar to TGA6 (TGA1a-related gene 6), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G12250.1); similar to TGA-type basic leucine zipper protein TGA2.1 [Phaseolus vulgaris] (GB:AAK84889.1); contains InterPro domain bZIP transcription factor, bZIP-1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zip Range:  from: 2151026    to: 2154554    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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