Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       --------->ANAC58                                     --------->ANAC46                                     --------->ANAC58                                   ---------->DOF2                            --------->ZAT14                            <---------ZAT18                                              ---------->DOF2              <---------YAB1<---------ZAT14                    <---------TOE1(3)    ----------->GT1     <---------DAG2    <---------ZAT14              --------->ARR14(2)   --------->ARR14(2)     <----------DOF2   --------->ZAT18              <---------ARR14(2)   <---------ARR14(2) <--------  --------->ZAT6       --------->ZAT14     --------->AHL20(2)  <---------TOE2(3) --------->MYB52(1)   actaacactttaagttataaatgagagcagtgaaccaaaacgcaatttaagacgaattcgttttgaaggtttgaaaattcgccaaactgataaaagaaca  2119200                          ------>ZmHOX2a(2)                         <------ZmHOX2a(2)                        <---------AGP1                        <-----------ARR10                        --------->GLK1(2)                        <---------ARR14(2)                        --------->ARR14(2)                        <---------ARR11(3)                   ---------->DOF2                        --------->ARR11(3)            <----------DOF2             <---------GLK1(2)                       <------ZmHOX2a(1)           ------>ZmHOX2a(2)              --------->ARR11(3)                       ===============================HOX2a_HOX2a                 <---------ARR11(3)                       ===================================HOX2a_HOX2a           <---------TOE2(3)                 --------->TOE1(3)                <-----------------AGL1        <---------TOE1(3) --ID1    --------->AHL20(2)                   ------>ZmHOX2a(2)           <----------DOF2   aaatttgaagaatttaaaaccttcaggatctagggtttgaaagaatggatcgatctctttaggcaaagaagagaactcttttaagattttgactctgatc  2119300                                               --------->MYB46(3)                                               <---------ATHB12                                              -------->P                                              ------>MYB46(1)                           --------->GLK1(1)  ------>MYB83                           <---------GLK1(1) --------->MYB55(1)                         <------NtERF2      --------->DEAR3(1)                        --------->LBD16     <---------MYB111(1)                       --------->LBD16      <---------MYB111(2)                       --------->RAP2.6(2)  <---------MYB46(2)                       --------->RAP2.3(2)  <---------MYB55(2)                                      -                      <---------LBD16       --------->MYB46(3)                                    ---                     ------>NtERF2          --------->AtMYB61                                     ---                     --------->LBD16       --------->MYB46(3)                                   -----                 <---------ARR14(2)     --------->MYB46(3)                                     ------                 --------->ARR14(2)    <------ZmHOX2a(2)                                  <---------ICU4             ------>ZmHOX2a(1)        --------->ARR14(2)                                  --------->YAB1     ------->GAMYB  --------->ANAC46  <---------ARR14(2)                                 --------->ICU4   -------->P=================================HOX2a_HOX2a                       <---------ATHB12-----   acagcaaccctcttcctccaatccgccggaattctcttccgatccaccaaccattcttcaaattcaacaaaattgaaatcaaatgaagacaataatcacc  2119400                                                                         --------->ANAC46          <---------ARR14(2)                                        --------->ZAT14      <-------TEIL                                                  <---------ZAT14    <---------GLK1(2)                                               <---------ZAT18    --------->ARR14(2)                                              --------->REM1(2)    <---------ARR14(2)                                            --------->LBD16    --------->ARR11(1)                                           <---------ANAC46  ----------->ARR10                                              <---------ANAC55(1)                < ------>GAMYB                                            <---------AHL20(2)                         - --->MYB46(1)            ----------->GT1           <---------AHL20(2)    --------->YAB1             - --->MYB83--------->ARR14(2)                   --------->CCA1(2) <---------ANAC55(2)            ----- ---->AtMYB61            <----------ID1       <---------ARR11(3) <---------ANAC58          ========== --->MYB46(3)--------->TOE1(2)                --------->ARR11(3) <---------ANAC58          <--------- ---->DEAR3(1)--------->MYB52(1)        ---------->DOF2 --------->AHL20(2)    <---------WOX13(1)-----   aacgcagattcgaatccaacgaagaaaacgaaaaaaaaaaaccaaagagatataaaaatttaaaattccgtgtactcgtaattgatagttctgcattacc  2119500                                                               <---------LBD16            ----------->GT1                          <------NtERF2                    --------->LBD16    <---------O2                                    ------>NtERF2                    <---------HSFB2a(2)    <---------TGA1a                                <---------RAP2.6(2)               --------->HSFB2a(2) ---------HSFB2a(2)           <---------ARR14(2)   --------->ANAC58           --------->ANAC58 -------->HSFB2a(2)           --------->ARR11(3)   --------->ATERF1(2)        --------->ANAC58 -------->LBD16               <---------ARR14(3)   <---------bZIP60(1)        --------->ANAC46 ---->TOE2(2)                 --------->ARR14(3)   --------->ANAC58       <-----------HVH21   <------ =============bZIP_DOF        <---------GLK1(2)    --------->bZIP60(1)   <----------DOF2     -------- -DOF2     --------->DAG2     <---------ARR11(3)  --------->RAP2.6(3)<-----------GT1<---------LBD16 ---->TOE1(2)        --------->ATHB12           ----------->HVH21--------->LBD16 <----------DOF2   tccgagacgagagaaggtgatatcgattggaagattttgaacatcatcttgtgacggcattttcttccggttaacctttcacgctttctgggaaatttta  2119600                                                                                                 <---                                                                                                <----                                                                                              <------                                                                                           <---------LBD16                                                                  --------------------->WRI1 --------                                                                  <------------CBF       --------->GLK1(2)                                                                 --------->ATHB12        <---------ARR14(2)                                                                <---------YAB1           --------->ARR14(2)                              *TSS                              <---------AHL20(2)   --------->HSFB2a(2)                    <---------TOE1(3)                       --------->ATHB51      <---------ARR11(3)  --------->LBD16   <---------TOE2(3)                       <---------ICU4        --------->ARR11(3) ---AHL20(2)       <-----------GT1                     --------->ANAC58          --------->CCA1(1) ->AHL20(2)        <---------DOF5.7(2)                 --------->ANAC58          --------->RVE1(1)   tctccgaagtctcacacagtttaacgttttggagtctcaagagtttgctacagaagaacgcataatttcattggtctcatcaaatatctcgaatccggtt  2119700                                       --------->AHL20(2)                                       <---------AHL20(2)                                <------NtERF2                             <------MYB83                                <---------At4g35610                   <------MYB46(1)                               ------>NtERF2                          <---------MYB46(3)                               ----------->RAV1(1)                    <------MYB83                              <---------DEAR3(1)                    <--------P                             <---------LBD16                       <---------ANAC46                             --------->LBD16                       <-------GAMYB                             --------->At4g35610                   <---------ANAC58                             <------NtERF2                         <---------ANAC58            ------------>CBF <---------At4g35610                  --------->MYB55(2)          ------>MYB46(1)   <---------ATERF1(1)                   <---------MYB46(3)          ------>MYB83     <---------DEAR3(1)                     <---------DEAR3(2)          -------        <---------MYB59    <---------WRKY38(1)                    <------MYB46(1)       =============      -------->P           <---------WRKY12                       --------->ATHB12      --------->At5g28300     --------->MYB52(1)  <-----------HVH21                        <------MYB83          <-------GAMYB   <---------MYB52(2)    <---------ARR14(2)                       --------->MYB52(2)   <---------MYB46(3) ---------CBF            --------->ARR14(2)----------->GT1       <---------AtMYB61<---------At5g28300 -----MYB46(3)    <-----------GT1  --------->At4g35610           --------->MYB111(1) <---------LBD16 ---MYB52(1)--------->MYB46(3)--------->ANAC46 --------->ATHB12  <---------MYB46(3)  --------->LBD16 ->LBD16------->GAMYB <---------LBD16 --------->AHL20(2)        <--------P<------MYB46(1)    --------   attgaactaaccgaaccaatttactccggtccgcggcagattaaattgtttattggttttatatgggttggttggatggtccattaccgcggttaacata  2119800                            <----------DOF2                          ----------------->AGL1                        <-----------GT1                                                             <                   <---------DEAR3(2)                                                         -------                   <---------MYB46(3)                                                         <------                  <---------TOE2(2)                                                           -------                  <---------DEAR3(1)     --------->ETT(2)     <-----------GT1                 -------               --------->TGA1a  --------->ANAC55(2)     <---------DAG2                       <-------               ========================bZIP_DOF         <----------DOF2                      --------               <---------TGA1a <---------LBD16       <-----------GT1                     <------ZmHOX2a(1) -->TOE2(3)    <---------O2--------->TOE1(3)   <---------GLK1(2)                --------------->AGL15 ========================MYC_MYB<---------ANAC55(2) <-----------GT1    ----------->GT1 <---------TOE2(3) ->YAB1        --------->O2--------->TOE2(3)   <---------ARR11(3)<----------DOF2<---------------AGL15   aactggtctatctagtaacgtcggttttacctttacggattagtctacagattttaaacttttttttctttacaagttaaaactattttgaggaaattat  2119900       --------->ARR11(3)       --------->AHL20(1)     ------->TEIL ---------AtLEC2 -->ATHB12 ---AHL20(2)                    --------->YAB1  <---------ZAT2 -->AHL20(2)              --------->ANAC58      <---------At4g35610 -->ATHB51              ---------->DOF2         --------->At4g35610     --------->TOE1(3) --AHL20(2)       --------->ATHB12              --------->ZAT2         --------->At4g35610 ->ICU4<---------AHL20(1) --------->ANAC58 <-----------GT1        --------->WOX13(1)   ttgtatgaatattttgtgaatgatgggaaagaaatcaaaattagtttaccagctcaatttgatcaaaccaattagcttaacaaaaacaaaacctagacca  2120000                                                                   <-----------GT1                                                              <---------AHL20(2)                                                             <---------ARR11(3)                                                             <---------AHL20(1)                                                             <---------AHL20(2)                <-----                                                             --------->AHL20(1)                ------                                                             --------->ARR11(3)                ------                                                        <---------ATHB12                      -------                ---------->DOF2               --------->YAB1 --------->AHL20(2)          <---------ANAC55(2)    <---------ZAT18                      <-------TEIL --------->WOX13(1)       <-------TEIL ---------    --------->ZAT18                     --------->CCA1(2)--------->YAB1--------->GLK1(2) --------->ANAC55(2)   tattagtgcccattcaaacaaagtacaatggaacagttagagatacaaacaaaattcaatcaatatatttgacaatctaagttcataaatcacataataa  2120100  Previous    Next  AGI:  At5g06830.1    Description:  Identical to CDK5RAP3-like protein [Arabidopsis Thaliana] (GB:Q9FG23); similar to unnamed protein product [Vitis vinifera] (GB:CAO23373.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63789.1); contains InterPro domain Protein of unknown function DUF773 (InterPro:IPR008491) Range:  from: 2116784    to: 2119630    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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