Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     <---------WOX13(1) -------At4g35610 ---HSFB2a(2)                                   ----------->GT1 -->HSFB2a(2)                       <---------AHL20(2) --LBD16                <---------ARR11(3)---------->DOF2 --------->AHL20(2)--------->TOE2(3)-------- -->RAV1(2)       <-----------GT1   --------->AHL20(2)--------->AHL20(2)<---------AHL20(2) <---------ATHB12   agcagattgctatgtaagttttacaagttctatttcaattttttaaaagttggagaaaaaataaacaaatttgtttaatctcaacaaatttcaatgaaag  2112500                              <---------KAN4(2)                                              --------                          --------->HSFB2a(2)                                    ----------->GT1     --------->AHL20(2)   <---------HSFB2a(2)            --------->MYB52(1)     <---------TOE1(3)  --------->YAB1      --------->ARR14(2)         --------->MYB52(1)             <---------TOE2(3)  -- -->DOF2     <-----------RAV1(1)  ------->TEIL <---------MYB52(2) --------->ATHB12     <---------AHL20(2)   gaactcataatataactgtggcagaattcgagaatgaacttgaacaaaaactaactgaataacgaaactcattgagaagattaaggtatataaaaacact  2112600                                                                                                   --                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                 <---                                                                                                 ----                                                                                                 <<<<                                                                                                 >>>>                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                              -------                                                                   --------->YAB1           ---------                         <---------ICU4                           <---------YAB1          ---------->DOF2             <---------TOE2(3)     <---------AHL20(2)   --------->AHL20(2)                ===========            --------->YAB1--------->TOE2(3)        --------->AHL20(2)                ================           <---------YAB1--------->YAB1  --------->ANAC58     <---------TOE2(3)      ---------->DOF2          <---------AHL20(2)   --------->YAB1      <---------AHL20(2)        ======================== ->ZAT6  --------->YAB1 <---------ATHB12 --------->ANAC58  <---------MYB52(2)<----------DOF2--------- -------->DOF2----------->GT1 <---------YAB1--------->TOE2(3)--------->MYB52(1)  <---------TOE2(3)<--   ataaagagagattataatgttattcaaacattatcatataatcaagcctcaaataaaatcaaataacgatgatcacagtctttaagaaaaagaaaagcca  2112700       <---------TOE1(2)       <---------TOE2(2)       <---------TOE2(3)    --------->ANAC58    --------->ANAC58                                       --------->KAN4(2) ------->ALFIN1                                            --------->ARR14(2) -----MYC3                                                 <---------ARR14(2) ---->PIF5                                                <---------KAN4(1) ---->MYC2                                                --------->KAN4(1) -----PIF5                                                <----------TaMYB80 ---->MYC3                                                --------->HSFB2a(1) ---->MYC4                                                <---------HSFB2a(1) -----MYC4                                                <---------HSFC1(2) ------TGA1a                                             ---------->TaMYB80 ----->PIF3(3)                                           <---------KAN4(2) <<<<<<HY5                                         <---------ANAC58 >>>>>>HY5                                         ===========================bZIP_DOF ------PIF3(3)                                     --------->O2 ----->bZIP60(2)                                   <---------TGA1a                 <---------ANAC55(2) ------bZIP60(2)                                   ===========================bZIP_DOF ----->TGA1a                                       <---------ANAC46                --------->ANAC55(2) ------O2                                          <---------ANAC58               --------------->AtSPL3 ----->O2                                          <---------O2                   <---------------AtSPL8 --------->PIF3(2)                               <---------TGA2(2)           <---------AHL20(2) >ANAC58--------->HSFB2a(1)                     ----------->TGA1             <---------YAB1 ======bZIP_DOF                   ------>ZmHOX2a(1)--------->TGA1a       <----------DOF2 ======bZIP_DOF     --------->WRKY12            ----------->HVH21       <---------ANAC58 ======bZIP_DOF     <---------ZAT18           <---------At4g35610       <---------ANAC58 >ANAC58<---------HSFB2a(1)      --------->TOE2(3) <---------bZIP60(2) ---------->ID1<-----------GT1 -----MYC2          --------->WRKY38(1)       --------->At4g35610  <----------DOF2--------------->AtSPL8   cgtggcacgaaggtttgactagttgactccaacgtccttaactgtttttgctgacgtggaatattcgcgctttggcttttttattaagtaccatctctct  2112800                                                         ---------->DOF2                                                      --------->ANAC46                                                      --------->HSFB2a(2)                                                      <---------HSFB2a(2)      <---------HSFB2a(1)                                                      --------->LBD16          <---------HSFC1(2)                                                     <---------HSFB2a(2)       --------->HSFC1(2)                                            <---------MYB52(1)        *TSS     --------->HSFB2a(1)                                      ------>ZmHOX2a(1)--------->LBD16--------->TOE1(2)            <----------DOF2       <---------ARR14(2) --------->HSFB2a(2)  <---------HSFB2a(2)         ------>ZmHOX2a(1)        --------->ARR14(2) <---------LBD16--------->DAG2          <-------- ---------->DOF2              --------->LBD16       <---------LBD16---------->DOF2  <-----------GT1 <   aactaaagctccttctttgatgttctctcttccgagtttcctctctgtttgttttcccggaaagcgagagaaagtgcgagaaaattccaccattcttttc  2112900                           <----------DOF2                         <---------At4g35610                         --------->At4g35610                   <---------YAB1                     --------->ETT(1)                        <--------HAHB4                --------->At4g35610                          <---------ICU4                <---------At4g35610                          --------->ATHB51             <---------MYB52(1)                             <---------YAB1            --------->TOE2(3)           <----------DOF2     --------->ICU4    <-----------GT1<-----------HVH21    <---------DAG2  ----------->RAV1(1)                 <-------- --DOF2 <----------DOF2<------NtERF2 <-----------GT1--------->DAG2                     --------->YAB1 ----------DOF2--------->MYB52(2)  ------->TEIL    ---------->DOF2                 <---------YAB1>>>>   ttcttttctcctttcgttagatgtcggagcttaaacgtatcactttctctgcataaagcaccattattactgagagtcgagagagattatagtgatgaaa  2113000                                                                                                  ---                                                                                                 <---                                                                                                 ----               <---------ARR14(2)                                                   ----------->GT1  ---------->DOF2        --------->REM1(1)                                         <---------TOE1(3) --------->MYB52(1) --------->ANAC46                                               <---------TOE2(3) ------>MYB83  --------->ARR14(2)                                              <----------DOF2   <--- ------>MYB46(1)   ------>ZmHOX2a(1)       --------->GLK1(2)             <---------ARR14(2)   <------ -YAB1      <---------ANAC58    --------->At4g35610                      --------->ARR14(2)<--------- >>>>>MYB2  <---------ANAC58    <---------At4g35610       <---------ANAC46 ------>ZmHOX2a(2)  -------   accaaacagcaattgcgattcctcgctacaattctgctcacgacgattctatttgttctggcgaagactgatactgatccgcttgaaggtaaatttccag  2113100                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                   <- ------>GLK1(2)                            --------->GLK1(2)                                    <---- ------ARR14(2)                         ----------->ARR10                                     ------- ----->ARR14(2)                   ------>ZmHOX2a(1)                                      --------->ANAC58 ------GLK1(2)                --------->ARR14(2)        <---------MYB52(1)               --------->ANAC58 ---HSFB2a(2)                 <---------ARR14(2)       <-------GAMYB                     <---------MYB52(2) --GT1                  <------ZmHOX2a(1) <---------GLK1(2)                           <------ZmHOX2a(1) -->HSFB2a(2)        <---------HSFB2a(2)<---------TOE2(3)                  <-----------GT1 --------->MYB52(1)   attctcgtttcatttttctcagtctaggagtgaatcctagctaagattcttgttcgtcgttgttctctgtttcaattttacttacttaggaacgaactgt  2113200                                                                                    --------->ANAC55(2)                                                                                    <---------ANAC58                                                                                 <---------MYB52(1)                                                                         <----------DOF2     <---------ICU4                                                     ------>ZmHOX2a(2)     --------->YAB1                                                    <------ZmHOX2a(2) --------ANAC58                                                       <---------ARR11(3)          --- ------->ANAC55(2)                                                    --------->ARR11(3)  --------->YAB1 --------ANAC55(2)            <---------ANAC58                        <---------AGP1<---------ANAC55(2) --------ANAC58            <----------DOF2                            --------->AGP1<---------ANAC58 -----MYB52(1)        --------->GLK1(1)                              <---------CCA1(2)    <---------ICU4 ---->GT1  --------->AtMYB61  <---------ANAC58              <---------ANAC46    <-----------HVH21 ---   tacttgatcatcaccaaaacacagaaaccctttcttgacttgaaatttctatgggtttagtcgcgagttttagatctttcgctgttacttgatcatcacc  2113300                                                                                 --------->ANAC46                                                                          ------>ZmHOX2a(2)                                                                         <------ZmHOX2a(2)                                                                         --------->GLK1(1)                                                                        --------->ARR14(3)                                                                        <---------ARR14(3)                             <---------MYB46(3)                         <---------AGP1           ----                            <---------WOX13(1)                          --------->ARR11(3)      <----       --------->ZAT14      <---------YAB1          <---------MYB52(1)  --------->ARR14(2)      ----- --->MYB83               <---------YAB1        <-----------GT1          <---------ARR14(2)  <-------- --->MYB46(1)      <----------DOF2  <---------AHL20(2)                  <---------ARR11(3)  ---------   aaatgactgtttagtcttcggctatatgtgattgttgtttatttgtgtttctccgtttagttttggctcttcaagatctctacaagtctctgagaaatcc  2113400  Previous    Next  AGI:  At5g06820.1    Description:  SRF2 (STRUBBELIG-RECEPTOR FAMILY 2); ATP binding / kinase/ protein serine/threonine kinase. Identical to Protein STRUBBELIG-RECEPTOR FAMILY 2 precursor (SRF2) [Arabidopsis Thaliana] (GB:Q9FG24); similar to SRF8 (STRUBBELIG-RECEPTOR FAMILY 8), kinase [Arabidopsis thaliana] (TAIR:AT4G22130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23374.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine-rich repeat, N-terminal ( Range:  from: 2112870    to: 2116755    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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